RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
CDH23-214ENST00000622827 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
CDH23-214ENST00000622827 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
CDH23-214ENST00000622827 MYT1Q01538 1121 aa22.72■■□□□ 1.23
CDH23-214ENST00000622827 ERICH6Q7L0X2 663 aa22.7■■□□□ 1.22
CDH23-214ENST00000622827 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
CDH23-214ENST00000622827 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
CDH23-214ENST00000622827 CENPBP07199 599 aaPredicted RBP22.44■■□□□ 1.18
CDH23-214ENST00000622827 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
CDH23-214ENST00000622827 APLP2Q06481 763 aa22.26■■□□□ 1.15
CDH23-214ENST00000622827 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
CDH23-214ENST00000622827 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
CDH23-214ENST00000622827 NEFLP07196 543 aa21.99■■□□□ 1.11
CDH23-214ENST00000622827 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
CDH23-214ENST00000622827 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
CDH23-214ENST00000622827 NISCHQ9Y2I1 1504 aa21.75■■□□□ 1.07
CDH23-214ENST00000622827 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
CDH23-214ENST00000622827 DAXXQ9UER7 740 aaPredicted RBP21.57■■□□□ 1.04
CDH23-214ENST00000622827 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
CDH23-214ENST00000622827 RTL5Q5HYW3 569 aaPredicted RBP21.19■□□□□ 0.98
CDH23-214ENST00000622827 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
CDH23-214ENST00000622827 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
CDH23-214ENST00000622827 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
CDH23-214ENST00000622827 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
CDH23-214ENST00000622827 HRCP23327 699 aa21.02■□□□□ 0.96
CDH23-214ENST00000622827 TRIM26Q12899 539 aaPredicted RBP20.94■□□□□ 0.94
CDH23-214ENST00000622827 PPARGC1BQ86YN6 1023 aaKnown RBP20.84■□□□□ 0.93
CDH23-214ENST00000622827 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
CDH23-214ENST00000622827 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
CDH23-214ENST00000622827 DIEXFQ68CQ4 756 aaKnown RBP20.61■□□□□ 0.89
CDH23-214ENST00000622827 CNGB1Q14028 1251 aaPredicted RBP20.56■□□□□ 0.88
CDH23-214ENST00000622827 ITGAEP38570 1179 aa20.52■□□□□ 0.88
CDH23-214ENST00000622827 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
CDH23-214ENST00000622827 BCANQ96GW7 911 aa20.44■□□□□ 0.86
CDH23-214ENST00000622827 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
CDH23-214ENST00000622827 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
CDH23-214ENST00000622827 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
CDH23-214ENST00000622827 EIF5BO60841 1220 aaKnown RBP20.33■□□□□ 0.85
CDH23-214ENST00000622827 GLIPR1L2Q4G1C9 344 aa20.31■□□□□ 0.84
CDH23-214ENST00000622827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
CDH23-214ENST00000622827 MYT1LQ9UL68 1186 aa20.26■□□□□ 0.83
CDH23-214ENST00000622827 ANP32AP39687 249 aaKnown RBP20.25■□□□□ 0.83
CDH23-214ENST00000622827 ZBTB47Q9UFB7 747 aaPredicted RBP20.18■□□□□ 0.82
CDH23-214ENST00000622827 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
CDH23-214ENST00000622827 ANP32CO43423 234 aa20.11■□□□□ 0.81
CDH23-214ENST00000622827 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
CDH23-214ENST00000622827 ANP32BQ92688 251 aaKnown RBP20.11■□□□□ 0.81
CDH23-214ENST00000622827 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
CDH23-214ENST00000622827 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
CDH23-214ENST00000622827 NPM2Q86SE8 214 aaKnown RBP19.99■□□□□ 0.79
CDH23-214ENST00000622827 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
CDH23-214ENST00000622827 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
CDH23-214ENST00000622827 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
CDH23-214ENST00000622827 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
CDH23-214ENST00000622827 NBR1Q14596 966 aa19.82■□□□□ 0.76
CDH23-214ENST00000622827 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
CDH23-214ENST00000622827 ZNF326Q5BKZ1 582 aaKnown RBP19.81■□□□□ 0.76
CDH23-214ENST00000622827 UPF2Q9HAU5 1272 aaKnown RBP19.73■□□□□ 0.75
CDH23-214ENST00000622827 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
CDH23-214ENST00000622827 FKBP8Q14318 412 aa19.68■□□□□ 0.74
CDH23-214ENST00000622827 ARXQ96QS3 562 aa19.67■□□□□ 0.74
CDH23-214ENST00000622827 NEFMP07197 916 aa19.66■□□□□ 0.74
CDH23-214ENST00000622827 TNNT2P45379 298 aaPredicted RBP19.56■□□□□ 0.72
CDH23-214ENST00000622827 CCDC136Q96JN2 1154 aa19.46■□□□□ 0.71
CDH23-214ENST00000622827 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDH23-214ENST00000622827 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
CDH23-214ENST00000622827 TRIM44Q96DX7 344 aaPredicted RBP19.37■□□□□ 0.69
CDH23-214ENST00000622827 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
CDH23-214ENST00000622827 CDK11BP21127 795 aaKnown RBP19.31■□□□□ 0.68
CDH23-214ENST00000622827 TONSLQ96HA7 1378 aa19.3■□□□□ 0.68
CDH23-214ENST00000622827 DDRGK1Q96HY6 314 aa19.3■□□□□ 0.68
CDH23-214ENST00000622827 BECN1Q14457 450 aa19.3■□□□□ 0.68
CDH23-214ENST00000622827 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
CDH23-214ENST00000622827 ANP32EQ9BTT0 268 aa19.28■□□□□ 0.68
CDH23-214ENST00000622827 NAP1L5Q96NT1 182 aaPredicted RBP19.25■□□□□ 0.67
CDH23-214ENST00000622827 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
CDH23-214ENST00000622827 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
CDH23-214ENST00000622827 PTMAP06454 111 aaKnown RBP19.21■□□□□ 0.67
CDH23-214ENST00000622827 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
CDH23-214ENST00000622827 GOLGA6L22H0YM25 854 aa19.19■□□□□ 0.66
CDH23-214ENST00000622827 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
CDH23-214ENST00000622827 DDX10Q13206 875 aaKnown RBP19.18■□□□□ 0.66
CDH23-214ENST00000622827 IRX6P78412 446 aaPredicted RBP19.17■□□□□ 0.66
CDH23-214ENST00000622827 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
CDH23-214ENST00000622827 DNTTIP2Q5QJE6 756 aaKnown RBP19.15■□□□□ 0.66
CDH23-214ENST00000622827 RTN4Q9NQC3 1192 aaKnown RBP19.15■□□□□ 0.66
CDH23-214ENST00000622827 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
CDH23-214ENST00000622827 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
CDH23-214ENST00000622827 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
CDH23-214ENST00000622827 WDR43Q15061 677 aaKnown RBP eCLIP19.06■□□□□ 0.64
CDH23-214ENST00000622827 ZRSR1Q15695 479 aaKnown RBP19.03■□□□□ 0.64
CDH23-214ENST00000622827 MIER1Q8N108 512 aa19■□□□□ 0.63
CDH23-214ENST00000622827 LAS1LQ9Y4W2 734 aaKnown RBP18.99■□□□□ 0.63
CDH23-214ENST00000622827 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
CDH23-214ENST00000622827 NOP58Q9Y2X3 529 aaKnown RBP18.97■□□□□ 0.63
CDH23-214ENST00000622827 ARID3CA6NKF2 412 aa18.96■□□□□ 0.63
CDH23-214ENST00000622827 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
CDH23-214ENST00000622827 CHAF1AQ13111 956 aaPredicted RBP18.92■□□□□ 0.62
CDH23-214ENST00000622827 AMER1Q5JTC6 1135 aaPredicted RBP18.92■□□□□ 0.62
CDH23-214ENST00000622827 CASC1Q6TDU7 716 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms