RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 HIRIP3Q9BW71 556 aaPredicted RBP18.84■□□□□ 0.61
AGRN-210ENST00000620552 MYH16Q9H6N6 1097 aa18.82■□□□□ 0.6
AGRN-210ENST00000620552 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
AGRN-210ENST00000620552 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
AGRN-210ENST00000620552 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
AGRN-210ENST00000620552 ARXQ96QS3 562 aa18.79■□□□□ 0.6
AGRN-210ENST00000620552 PLEKHD1A6NEE1 506 aa18.79■□□□□ 0.6
AGRN-210ENST00000620552 RGL3Q3MIN7 710 aa18.79■□□□□ 0.6
AGRN-210ENST00000620552 CLIP1P30622 1438 aa18.74■□□□□ 0.59
AGRN-210ENST00000620552 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
AGRN-210ENST00000620552 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
AGRN-210ENST00000620552 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
AGRN-210ENST00000620552 IRX6P78412 446 aaPredicted RBP18.7■□□□□ 0.58
AGRN-210ENST00000620552 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
AGRN-210ENST00000620552 EIF4G2P78344 907 aaKnown RBP eCLIP18.69■□□□□ 0.582e-7■■■■■ 96.8
AGRN-210ENST00000620552 LMOD2Q6P5Q4 547 aa18.67■□□□□ 0.58
AGRN-210ENST00000620552 NBR1Q14596 966 aa18.66■□□□□ 0.58
AGRN-210ENST00000620552 TULP1O00294 542 aaPredicted RBP18.65■□□□□ 0.58
AGRN-210ENST00000620552 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
AGRN-210ENST00000620552 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
AGRN-210ENST00000620552 CFDP1Q9UEE9 299 aaPredicted RBP18.63■□□□□ 0.57
AGRN-210ENST00000620552 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
AGRN-210ENST00000620552 GOLGA3Q08378 1498 aa18.62■□□□□ 0.57
AGRN-210ENST00000620552 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
AGRN-210ENST00000620552 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
AGRN-210ENST00000620552 NPHP1O15259 732 aa18.6■□□□□ 0.57
AGRN-210ENST00000620552 CFAP53Q96M91 514 aa18.6■□□□□ 0.57
AGRN-210ENST00000620552 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
AGRN-210ENST00000620552 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
AGRN-210ENST00000620552 POGKQ9P215 609 aa18.57■□□□□ 0.56
AGRN-210ENST00000620552 NACADO15069 1562 aa18.57■□□□□ 0.56
AGRN-210ENST00000620552 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
AGRN-210ENST00000620552 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
AGRN-210ENST00000620552 CARD11Q9BXL7 1154 aa18.52■□□□□ 0.56
AGRN-210ENST00000620552 TNNT2P45379 298 aaPredicted RBP18.51■□□□□ 0.55
AGRN-210ENST00000620552 MLECQ14165 292 aa18.51■□□□□ 0.55
AGRN-210ENST00000620552 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
AGRN-210ENST00000620552 FTSJ3Q8IY81 847 aaKnown RBP18.51■□□□□ 0.55
AGRN-210ENST00000620552 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
AGRN-210ENST00000620552 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.551e-6■■■■□ 20.5
AGRN-210ENST00000620552 MIER1Q8N108 512 aa18.49■□□□□ 0.55
AGRN-210ENST00000620552 TPRNQ4KMQ1 711 aa18.49■□□□□ 0.55
AGRN-210ENST00000620552 NCLP19338 710 aaKnown RBP18.48■□□□□ 0.55
AGRN-210ENST00000620552 MAPK8IP3Q9UPT6 1336 aa18.47■□□□□ 0.55
AGRN-210ENST00000620552 CASC1Q6TDU7 716 aa18.47■□□□□ 0.55
AGRN-210ENST00000620552 TAOK2Q9UL54 1235 aa18.47■□□□□ 0.55
AGRN-210ENST00000620552 BECN1Q14457 450 aa18.44■□□□□ 0.54
AGRN-210ENST00000620552 EEA1Q15075 1411 aa18.42■□□□□ 0.54
AGRN-210ENST00000620552 CC2D1BQ5T0F9 858 aaKnown RBP18.42■□□□□ 0.54
AGRN-210ENST00000620552 SOX12O15370 315 aa18.41■□□□□ 0.54
AGRN-210ENST00000620552 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
AGRN-210ENST00000620552 KANK1Q14678 1352 aa18.39■□□□□ 0.53
AGRN-210ENST00000620552 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
AGRN-210ENST00000620552 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
AGRN-210ENST00000620552 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
AGRN-210ENST00000620552 CCNB3Q8WWL7 1395 aa18.37■□□□□ 0.53
AGRN-210ENST00000620552 DDRGK1Q96HY6 314 aa18.37■□□□□ 0.53
AGRN-210ENST00000620552 ZRSR1Q15695 479 aaKnown RBP18.37■□□□□ 0.53
AGRN-210ENST00000620552 GOLGA2Q08379 1002 aa18.35■□□□□ 0.53
AGRN-210ENST00000620552 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
AGRN-210ENST00000620552 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
AGRN-210ENST00000620552 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
AGRN-210ENST00000620552 SAFB2Q14151 953 aaKnown RBP eCLIP18.33■□□□□ 0.53
AGRN-210ENST00000620552 GOLGA6L22H0YM25 854 aa18.33■□□□□ 0.52
AGRN-210ENST00000620552 SRPK2P78362 688 aaKnown RBP18.32■□□□□ 0.52
AGRN-210ENST00000620552 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
AGRN-210ENST00000620552 DCAF11Q8TEB1 546 aa18.3■□□□□ 0.52
AGRN-210ENST00000620552 SIN3AQ96ST3 1273 aa18.3■□□□□ 0.52
AGRN-210ENST00000620552 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
AGRN-210ENST00000620552 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
AGRN-210ENST00000620552 NAP1L2Q9ULW6 460 aaPredicted RBP18.29■□□□□ 0.52
AGRN-210ENST00000620552 TRIM44Q96DX7 344 aaPredicted RBP18.28■□□□□ 0.52
AGRN-210ENST00000620552 SUPT16HQ9Y5B9 1047 aaKnown RBP18.27■□□□□ 0.52
AGRN-210ENST00000620552 STK26Q9P289 416 aa18.27■□□□□ 0.52
AGRN-210ENST00000620552 CUX2O14529 1486 aa18.26■□□□□ 0.51
AGRN-210ENST00000620552 GGT6Q6P531 493 aa18.26■□□□□ 0.51
AGRN-210ENST00000620552 FGD1P98174 961 aa18.25■□□□□ 0.51
AGRN-210ENST00000620552 TMF1P82094 1093 aa18.25■□□□□ 0.51
AGRN-210ENST00000620552 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
AGRN-210ENST00000620552 KCNJ4P48050 445 aa18.23■□□□□ 0.51
AGRN-210ENST00000620552 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
AGRN-210ENST00000620552 PTMAP06454 111 aaKnown RBP18.23■□□□□ 0.51
AGRN-210ENST00000620552 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
AGRN-210ENST00000620552 RGS3P49796 1198 aa18.21■□□□□ 0.51
AGRN-210ENST00000620552 GLIPR1L2Q4G1C9 344 aa18.2■□□□□ 0.5
AGRN-210ENST00000620552 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
AGRN-210ENST00000620552 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
AGRN-210ENST00000620552 MORC1Q86VD1 984 aa18.17■□□□□ 0.5
AGRN-210ENST00000620552 CHMP4BQ9H444 224 aaKnown RBP18.16■□□□□ 0.5
AGRN-210ENST00000620552 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
AGRN-210ENST00000620552 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
AGRN-210ENST00000620552 ANP32EQ9BTT0 268 aa18.15■□□□□ 0.5
AGRN-210ENST00000620552 DNTTIP2Q5QJE6 756 aaKnown RBP18.14■□□□□ 0.49
AGRN-210ENST00000620552 PLCB2Q00722 1185 aa18.14■□□□□ 0.49
AGRN-210ENST00000620552 MS4A1P11836 297 aa18.13■□□□□ 0.49
AGRN-210ENST00000620552 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
AGRN-210ENST00000620552 CSB-PGBD3P0DP91 1061 aa18.12■□□□□ 0.49
AGRN-210ENST00000620552 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
AGRN-210ENST00000620552 CLSTN1O94985 981 aa18.12■□□□□ 0.49
AGRN-210ENST00000620552 CARMIL2Q6F5E8 1435 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms