RNA–Protein interactions for RNA: ENST00000620443.1

GRIA3-207, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GRIA3, Length 4,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-207ENST00000620443 CHAF1AQ13111 956 aaPredicted RBP8.35□□□□□ -1.07
GRIA3-207ENST00000620443 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
GRIA3-207ENST00000620443 L1TD1Q5T7N2 865 aaKnown RBP8.34□□□□□ -1.07
GRIA3-207ENST00000620443 ZRSR1Q15695 479 aaKnown RBP8.33□□□□□ -1.08
GRIA3-207ENST00000620443 SUPT16HQ9Y5B9 1047 aaKnown RBP8.33□□□□□ -1.08
GRIA3-207ENST00000620443 HSP90AA2PQ14568 343 aaPredicted RBP8.33□□□□□ -1.08
GRIA3-207ENST00000620443 RBM19Q9Y4C8 960 aaKnown RBP8.32□□□□□ -1.08
GRIA3-207ENST00000620443 A0A0U1RQG5 324 aaPredicted RBP8.3□□□□□ -1.08
GRIA3-207ENST00000620443 TONSLQ96HA7 1378 aa8.29□□□□□ -1.08
GRIA3-207ENST00000620443 PPP4R2Q9NY27 417 aa8.28□□□□□ -1.08
GRIA3-207ENST00000620443 ZBTB7CA1YPR0 619 aa8.28□□□□□ -1.08
GRIA3-207ENST00000620443 MYH16Q9H6N6 1097 aa8.28□□□□□ -1.08
GRIA3-207ENST00000620443 NRDCO43847 1150 aa8.27□□□□□ -1.08
GRIA3-207ENST00000620443 WDR43Q15061 677 aaKnown RBP eCLIP8.27□□□□□ -1.08
GRIA3-207ENST00000620443 RGS3P49796 1198 aa8.26□□□□□ -1.09
GRIA3-207ENST00000620443 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
GRIA3-207ENST00000620443 GOLGA6L6A8MZA4 724 aa8.25□□□□□ -1.09
GRIA3-207ENST00000620443 PRKCSHP14314 528 aaPredicted RBP8.25□□□□□ -1.09
GRIA3-207ENST00000620443 B4GALNT3Q6L9W6 998 aa8.25□□□□□ -1.09
GRIA3-207ENST00000620443 PODXL2Q9NZ53 605 aa8.25□□□□□ -1.09
GRIA3-207ENST00000620443 PKNOX2Q96KN3 472 aa8.24□□□□□ -1.09
GRIA3-207ENST00000620443 CALRP27797 417 aaKnown RBP8.23□□□□□ -1.09
GRIA3-207ENST00000620443 HIRIP3Q9BW71 556 aaPredicted RBP8.23□□□□□ -1.09
GRIA3-207ENST00000620443 SENP3-EIF4A1A0A087X0R7 540 aa8.23□□□□□ -1.09
GRIA3-207ENST00000620443 HSP90AB1P08238 724 aaKnown RBP8.22□□□□□ -1.09
GRIA3-207ENST00000620443 TIMELESSQ9UNS1 1208 aa8.22□□□□□ -1.09
GRIA3-207ENST00000620443 KIAA2012Q0VF49 1180 aa8.21□□□□□ -1.09
GRIA3-207ENST00000620443 GZF1Q9H116 711 aaPredicted RBP8.21□□□□□ -1.09
GRIA3-207ENST00000620443 TSHZ2Q9NRE2 1034 aa8.21□□□□□ -1.1
GRIA3-207ENST00000620443 DRC7Q8IY82 874 aa8.2□□□□□ -1.1
GRIA3-207ENST00000620443 PTMSP20962 102 aa8.19□□□□□ -1.1
GRIA3-207ENST00000620443 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
GRIA3-207ENST00000620443 ABCC9O60706 1549 aa8.18□□□□□ -1.1
GRIA3-207ENST00000620443 HSCBQ8IWL3 235 aa8.17□□□□□ -1.1
GRIA3-207ENST00000620443 CASC1Q6TDU7 716 aa8.17□□□□□ -1.1
GRIA3-207ENST00000620443 GOLGA6L3A6NEY3 463 aa8.17□□□□□ -1.1
GRIA3-207ENST00000620443 GOLGA6L4A6NEF3 574 aa8.16□□□□□ -1.1
GRIA3-207ENST00000620443 APPP05067 770 aa8.16□□□□□ -1.1
GRIA3-207ENST00000620443 TULP1O00294 542 aaPredicted RBP8.15□□□□□ -1.11
GRIA3-207ENST00000620443 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
GRIA3-207ENST00000620443 ZNF771Q7L3S4 317 aaPredicted RBP8.13□□□□□ -1.11
GRIA3-207ENST00000620443 GOLGA6L1Q8N7Z2 621 aa8.13□□□□□ -1.11
GRIA3-207ENST00000620443 ANO8Q9HCE9 1232 aaPredicted RBP8.13□□□□□ -1.11
GRIA3-207ENST00000620443 DCAF1Q9Y4B6 1507 aa8.13□□□□□ -1.11
GRIA3-207ENST00000620443 NOC3LQ8WTT2 800 aaKnown RBP8.13□□□□□ -1.11
GRIA3-207ENST00000620443 TAOK2Q9UL54 1235 aa8.12□□□□□ -1.11
GRIA3-207ENST00000620443 SETQ01105 290 aaPredicted RBP8.12□□□□□ -1.11
GRIA3-207ENST00000620443 FTSJ3Q8IY81 847 aaKnown RBP8.12□□□□□ -1.11
GRIA3-207ENST00000620443 GBP4Q96PP9 640 aa8.12□□□□□ -1.11
GRIA3-207ENST00000620443 EIF4G2P78344 907 aaKnown RBP eCLIP8.11□□□□□ -1.11
GRIA3-207ENST00000620443 IPO9Q96P70 1041 aaKnown RBP8.11□□□□□ -1.11
GRIA3-207ENST00000620443 FAM13BQ9NYF5 915 aa8.1□□□□□ -1.11
GRIA3-207ENST00000620443 P3H3Q8IVL6 736 aa8.09□□□□□ -1.11
GRIA3-207ENST00000620443 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
GRIA3-207ENST00000620443 ZNF777Q9ULD5 760 aaPredicted RBP8.09□□□□□ -1.11
GRIA3-207ENST00000620443 FGD1P98174 961 aa8.08□□□□□ -1.12
GRIA3-207ENST00000620443 FRAT1Q92837 279 aaPredicted RBP8.08□□□□□ -1.12
GRIA3-207ENST00000620443 CHGAP10645 457 aaKnown RBP8.07□□□□□ -1.12
GRIA3-207ENST00000620443 USP35Q9P2H5 1018 aa8.07□□□□□ -1.12
GRIA3-207ENST00000620443 GSE1Q14687 1217 aa8.07□□□□□ -1.12
GRIA3-207ENST00000620443 KDM2AQ9Y2K7 1162 aa8.06□□□□□ -1.12
GRIA3-207ENST00000620443 NPM1P06748 294 aaKnown RBP eCLIP8.06□□□□□ -1.12
GRIA3-207ENST00000620443 KCNJ4P48050 445 aa8.05□□□□□ -1.12
GRIA3-207ENST00000620443 NAP1L2Q9ULW6 460 aaPredicted RBP8.05□□□□□ -1.12
GRIA3-207ENST00000620443 SYAP1Q96A49 352 aaPredicted RBP8.05□□□□□ -1.12
GRIA3-207ENST00000620443 NEUROD2Q15784 382 aa8.04□□□□□ -1.12
GRIA3-207ENST00000620443 TCERG1O14776 1098 aaKnown RBP8.04□□□□□ -1.12
GRIA3-207ENST00000620443 CALD1Q05682 793 aaKnown RBP8.04□□□□□ -1.12
GRIA3-207ENST00000620443 PATL2C9JE40 543 aaKnown RBP8.03□□□□□ -1.12
GRIA3-207ENST00000620443 NCBP3Q53F19 620 aaKnown RBP8.02□□□□□ -1.13
GRIA3-207ENST00000620443 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.13
GRIA3-207ENST00000620443 CHIC2Q9UKJ5 165 aa8.02□□□□□ -1.13
GRIA3-207ENST00000620443 MCCP23508 829 aa8□□□□□ -1.13
GRIA3-207ENST00000620443 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
GRIA3-207ENST00000620443 GPS2Q13227 327 aa7.99□□□□□ -1.13
GRIA3-207ENST00000620443 TEX35Q5T0J7 233 aa7.99□□□□□ -1.13
GRIA3-207ENST00000620443 FAM43AQ8N2R8 423 aa7.99□□□□□ -1.13
GRIA3-207ENST00000620443 CHMP4BQ9H444 224 aaKnown RBP7.99□□□□□ -1.13
GRIA3-207ENST00000620443 MS4A1P11836 297 aa7.98□□□□□ -1.13
GRIA3-207ENST00000620443 TAF7LQ5H9L4 462 aa7.98□□□□□ -1.13
GRIA3-207ENST00000620443 CCAR2Q8N163 923 aaKnown RBP7.98□□□□□ -1.13
GRIA3-207ENST00000620443 CFAP53Q96M91 514 aa7.98□□□□□ -1.13
GRIA3-207ENST00000620443 NOM1Q5C9Z4 860 aaKnown RBP7.97□□□□□ -1.13
GRIA3-207ENST00000620443 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.97□□□□□ -1.13
GRIA3-207ENST00000620443 TPM4P67936 248 aa7.97□□□□□ -1.13
GRIA3-207ENST00000620443 MAP7D2Q96T17 732 aa7.97□□□□□ -1.13
GRIA3-207ENST00000620443 STAG3Q9UJ98 1225 aa7.97□□□□□ -1.13
GRIA3-207ENST00000620443 PDE4CQ08493 712 aa7.96□□□□□ -1.13
GRIA3-207ENST00000620443 OS9Q13438 667 aaPredicted RBP7.96□□□□□ -1.13
GRIA3-207ENST00000620443 SLC4A3P48751 1232 aa7.96□□□□□ -1.14
GRIA3-207ENST00000620443 GNL2Q13823 731 aaKnown RBP7.96□□□□□ -1.14
GRIA3-207ENST00000620443 KNSTRNQ9Y448 316 aa7.96□□□□□ -1.14
GRIA3-207ENST00000620443 FOXD4L1Q9NU39 408 aa7.96□□□□□ -1.14
GRIA3-207ENST00000620443 RB1CC1Q8TDY2 1594 aa7.96□□□□□ -1.14
GRIA3-207ENST00000620443 DDX11L8A8MPP1 907 aa7.96□□□□□ -1.14
GRIA3-207ENST00000620443 TPM3P06753 285 aa7.96□□□□□ -1.14
GRIA3-207ENST00000620443 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
GRIA3-207ENST00000620443 CCDC66A2RUB6 948 aa7.95□□□□□ -1.14
GRIA3-207ENST00000620443 MFAP1P55081 439 aaKnown RBP7.95□□□□□ -1.14
GRIA3-207ENST00000620443 IL27Q8NEV9 243 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms