RNA–Protein interactions for RNA: ENST00000619245.1

ACACA-244, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 3

Gene ACACA, Length 635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-244ENST00000619245 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
ACACA-244ENST00000619245 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.612e-7■□□□□ 11.1
ACACA-244ENST00000619245 POLA2Q14181 598 aa11.2□□□□□ -0.62
ACACA-244ENST00000619245 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
ACACA-244ENST00000619245 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
ACACA-244ENST00000619245 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
ACACA-244ENST00000619245 HAX1O00165 279 aa11.18□□□□□ -0.62
ACACA-244ENST00000619245 DNMBPQ6XZF7 1577 aa11.18□□□□□ -0.62
ACACA-244ENST00000619245 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
ACACA-244ENST00000619245 CLASP1Q7Z460 1538 aa11.15□□□□□ -0.62
ACACA-244ENST00000619245 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
ACACA-244ENST00000619245 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
ACACA-244ENST00000619245 POLA1P09884 1462 aaPredicted RBP11.12□□□□□ -0.63
ACACA-244ENST00000619245 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
ACACA-244ENST00000619245 TDRD9Q8NDG6 1382 aaKnown RBP11.1□□□□□ -0.63
ACACA-244ENST00000619245 RAD54L2Q9Y4B4 1467 aa11.1□□□□□ -0.63
ACACA-244ENST00000619245 GAPVD1Q14C86 1478 aa11.08□□□□□ -0.64
ACACA-244ENST00000619245 CHMP7Q8WUX9 453 aaPredicted RBP11.08□□□□□ -0.64
ACACA-244ENST00000619245 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
ACACA-244ENST00000619245 SOGA1O94964 1423 aa11.05□□□□□ -0.64
ACACA-244ENST00000619245 MAGI1Q96QZ7 1491 aaPredicted RBP11.04□□□□□ -0.64
ACACA-244ENST00000619245 SYNJ2O15056 1496 aa11.01□□□□□ -0.65
ACACA-244ENST00000619245 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.653e-9■■■■□ 20.5
ACACA-244ENST00000619245 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
ACACA-244ENST00000619245 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
ACACA-244ENST00000619245 GRIN2BQ13224 1484 aa11□□□□□ -0.65
ACACA-244ENST00000619245 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
ACACA-244ENST00000619245 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
ACACA-244ENST00000619245 PITPNM1O00562 1244 aa10.97□□□□□ -0.65
ACACA-244ENST00000619245 PBRM1Q86U86 1689 aa10.96□□□□□ -0.65
ACACA-244ENST00000619245 EVX2Q03828 476 aa10.96□□□□□ -0.65
ACACA-244ENST00000619245 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
ACACA-244ENST00000619245 KIF13AQ9H1H9 1805 aa10.94□□□□□ -0.66
ACACA-244ENST00000619245 MYCNP04198 464 aaPredicted RBP10.94□□□□□ -0.66
ACACA-244ENST00000619245 KCNA4P22459 653 aa10.93□□□□□ -0.66
ACACA-244ENST00000619245 CUX1P39880 1505 aa10.92□□□□□ -0.66
ACACA-244ENST00000619245 CEP170Q5SW79 1584 aa10.9□□□□□ -0.67
ACACA-244ENST00000619245 KDM4FA0A1W2PPD8 638 aa10.88□□□□□ -0.67
ACACA-244ENST00000619245 GRIN2AQ12879 1464 aa10.87□□□□□ -0.67
ACACA-244ENST00000619245 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
ACACA-244ENST00000619245 FAM69CQ0P6D2 419 aa10.85□□□□□ -0.67
ACACA-244ENST00000619245 LHX8Q68G74 356 aa10.84□□□□□ -0.67
ACACA-244ENST00000619245 KDM6BO15054 1643 aa10.84□□□□□ -0.67
ACACA-244ENST00000619245 SHROOM2Q13796 1616 aa10.83□□□□□ -0.68
ACACA-244ENST00000619245 NUP160Q12769 1436 aa10.83□□□□□ -0.68
ACACA-244ENST00000619245 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
ACACA-244ENST00000619245 ABCC10Q5T3U5 1492 aa10.82□□□□□ -0.68
ACACA-244ENST00000619245 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
ACACA-244ENST00000619245 DIP2BQ9P265 1576 aa10.81□□□□□ -0.68
ACACA-244ENST00000619245 PRG4Q92954 1404 aaPredicted RBP10.78□□□□□ -0.68
ACACA-244ENST00000619245 TSPOAP1O95153 1857 aa10.77□□□□□ -0.69
ACACA-244ENST00000619245 MAPKBP1O60336 1514 aa10.76□□□□□ -0.69
ACACA-244ENST00000619245 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
ACACA-244ENST00000619245 FHAD1B1AJZ9 1412 aa10.75□□□□□ -0.69
ACACA-244ENST00000619245 PLSCR2Q9NRY7 297 aa10.74□□□□□ -0.69
ACACA-244ENST00000619245 ADGRL1O94910 1474 aa10.73□□□□□ -0.69
ACACA-244ENST00000619245 HECW2Q9P2P5 1572 aa10.73□□□□□ -0.69
ACACA-244ENST00000619245 ADCY10Q96PN6 1610 aa10.73□□□□□ -0.69
ACACA-244ENST00000619245 JPH4Q96JJ6 628 aa10.7□□□□□ -0.7
ACACA-244ENST00000619245 ATF5Q9Y2D1 282 aaPredicted RBP10.7□□□□□ -0.7
ACACA-244ENST00000619245 RUSC2Q8N2Y8 1516 aa10.69□□□□□ -0.7
ACACA-244ENST00000619245 WRNQ14191 1432 aaPredicted RBP eCLIP10.69□□□□□ -0.7
ACACA-244ENST00000619245 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
ACACA-244ENST00000619245 GABBR2O75899 941 aa10.69□□□□□ -0.7
ACACA-244ENST00000619245 PRKAR2AP13861 404 aaKnown RBP10.68□□□□□ -0.7
ACACA-244ENST00000619245 ERICH3Q5RHP9 1530 aa10.68□□□□□ -0.7
ACACA-244ENST00000619245 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
ACACA-244ENST00000619245 TTBK1Q5TCY1 1321 aaPredicted RBP10.61□□□□□ -0.71
ACACA-244ENST00000619245 PPRC1Q5VV67 1664 aaKnown RBP10.61□□□□□ -0.71
ACACA-244ENST00000619245 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
ACACA-244ENST00000619245 FBXO41Q8TF61 875 aa10.6□□□□□ -0.71
ACACA-244ENST00000619245 COL17A1Q9UMD9 1497 aaPredicted RBP10.57□□□□□ -0.72
ACACA-244ENST00000619245 ASXL2Q76L83 1435 aa10.57□□□□□ -0.72
ACACA-244ENST00000619245 GLI2P10070 1586 aa10.56□□□□□ -0.72
ACACA-244ENST00000619245 ABCC2Q92887 1545 aa10.55□□□□□ -0.72
ACACA-244ENST00000619245 KIAA0586Q9BVV6 1533 aa10.54□□□□□ -0.72
ACACA-244ENST00000619245 CUL7Q14999 1698 aa10.54□□□□□ -0.72
ACACA-244ENST00000619245 SPDYE2BA6NHP3 402 aa10.54□□□□□ -0.72
ACACA-244ENST00000619245 SPDYE6P0CI01 402 aa10.54□□□□□ -0.72
ACACA-244ENST00000619245 PTPRGP23470 1445 aa10.54□□□□□ -0.72
ACACA-244ENST00000619245 SPDYE2Q495Y8 402 aa10.54□□□□□ -0.72
ACACA-244ENST00000619245 CLEC11AQ9Y240 323 aa10.54□□□□□ -0.72
ACACA-244ENST00000619245 PLB1Q6P1J6 1458 aa10.54□□□□□ -0.72
ACACA-244ENST00000619245 SPDYE1Q8NFV5 336 aaPredicted RBP10.53□□□□□ -0.72
ACACA-244ENST00000619245 TEX14Q8IWB6 1497 aa10.51□□□□□ -0.73
ACACA-244ENST00000619245 MAP3K4Q9Y6R4 1608 aa10.51□□□□□ -0.73
ACACA-244ENST00000619245 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
ACACA-244ENST00000619245 TNIKQ9UKE5 1360 aa10.49□□□□□ -0.73
ACACA-244ENST00000619245 LMTK3Q96Q04 1460 aa10.49□□□□□ -0.73
ACACA-244ENST00000619245 CARMIL2Q6F5E8 1435 aa10.47□□□□□ -0.73
ACACA-244ENST00000619245 KIF21BO75037 1637 aa10.45□□□□□ -0.74
ACACA-244ENST00000619245 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
ACACA-244ENST00000619245 UACAQ9BZF9 1416 aa10.45□□□□□ -0.74
ACACA-244ENST00000619245 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
ACACA-244ENST00000619245 FOXD4L1Q9NU39 408 aa10.44□□□□□ -0.74
ACACA-244ENST00000619245 ZCCHC11Q5TAX3 1644 aaKnown RBP10.44□□□□□ -0.74
ACACA-244ENST00000619245 IGF1RP08069 1367 aa10.42□□□□□ -0.74
ACACA-244ENST00000619245 SUPT5HO00267 1087 aaKnown RBP10.42□□□□□ -0.74
ACACA-244ENST00000619245 KDM5BQ9UGL1 1544 aa10.42□□□□□ -0.74
ACACA-244ENST00000619245 IQGAP2Q13576 1575 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms