RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
TP53-223ENST00000618944 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
TP53-223ENST00000618944 FAM50AQ14320 339 aaKnown RBP16.42■□□□□ 0.22
TP53-223ENST00000618944 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
TP53-223ENST00000618944 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
TP53-223ENST00000618944 FHOD3Q2V2M9 1422 aa16.39■□□□□ 0.21
TP53-223ENST00000618944 TIAM1Q13009 1591 aa16.39■□□□□ 0.21
TP53-223ENST00000618944 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
TP53-223ENST00000618944 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
TP53-223ENST00000618944 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
TP53-223ENST00000618944 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
TP53-223ENST00000618944 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
TP53-223ENST00000618944 MAP3K1Q13233 1512 aa16.34■□□□□ 0.21
TP53-223ENST00000618944 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
TP53-223ENST00000618944 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
TP53-223ENST00000618944 SETD5Q9C0A6 1442 aa16.29■□□□□ 0.2
TP53-223ENST00000618944 SIN3AQ96ST3 1273 aa16.26■□□□□ 0.19
TP53-223ENST00000618944 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
TP53-223ENST00000618944 PDS5BQ9NTI5 1447 aa16.26■□□□□ 0.19
TP53-223ENST00000618944 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
TP53-223ENST00000618944 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
TP53-223ENST00000618944 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
TP53-223ENST00000618944 CUL7Q14999 1698 aa16.22■□□□□ 0.19
TP53-223ENST00000618944 EFCAB5A4FU69 1503 aa16.22■□□□□ 0.19
TP53-223ENST00000618944 MAPKBP1O60336 1514 aa16.21■□□□□ 0.19
TP53-223ENST00000618944 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
TP53-223ENST00000618944 MTUS2Q5JR59 1369 aa16.19■□□□□ 0.18
TP53-223ENST00000618944 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
TP53-223ENST00000618944 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.188e-7■■■□□ 16.1
TP53-223ENST00000618944 CTTNBP2Q8WZ74 1663 aa16.15■□□□□ 0.18
TP53-223ENST00000618944 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
TP53-223ENST00000618944 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
TP53-223ENST00000618944 ABCA5Q8WWZ7 1642 aa16.14■□□□□ 0.17
TP53-223ENST00000618944 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
TP53-223ENST00000618944 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
TP53-223ENST00000618944 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
TP53-223ENST00000618944 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
TP53-223ENST00000618944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
TP53-223ENST00000618944 PTPRKQ15262 1439 aa16.08■□□□□ 0.17
TP53-223ENST00000618944 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
TP53-223ENST00000618944 SAMD9Q5K651 1589 aa16.06■□□□□ 0.16
TP53-223ENST00000618944 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
TP53-223ENST00000618944 KCNH8Q96L42 1107 aa16.06■□□□□ 0.16
TP53-223ENST00000618944 NCOA2Q15596 1464 aa16.06■□□□□ 0.16
TP53-223ENST00000618944 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
TP53-223ENST00000618944 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
TP53-223ENST00000618944 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
TP53-223ENST00000618944 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
TP53-223ENST00000618944 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
TP53-223ENST00000618944 MYOM3Q5VTT5 1437 aa16.02■□□□□ 0.16
TP53-223ENST00000618944 CCDC18Q5T9S5 1454 aa16■□□□□ 0.15
TP53-223ENST00000618944 LRRIQ1Q96JM4 1722 aa16■□□□□ 0.15
TP53-223ENST00000618944 HFM1A2PYH4 1435 aa15.99■□□□□ 0.15
TP53-223ENST00000618944 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
TP53-223ENST00000618944 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
TP53-223ENST00000618944 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
TP53-223ENST00000618944 NAIPQ13075 1403 aa15.97■□□□□ 0.15
TP53-223ENST00000618944 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
TP53-223ENST00000618944 TRIM52Q96A61 297 aa15.95■□□□□ 0.14
TP53-223ENST00000618944 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
TP53-223ENST00000618944 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
TP53-223ENST00000618944 SUPT6HQ7KZ85 1726 aaKnown RBP15.94■□□□□ 0.14
TP53-223ENST00000618944 IQGAP2Q13576 1575 aa15.93■□□□□ 0.14
TP53-223ENST00000618944 PTPN23Q9H3S7 1636 aa15.93■□□□□ 0.14
TP53-223ENST00000618944 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
TP53-223ENST00000618944 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
TP53-223ENST00000618944 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
TP53-223ENST00000618944 CDK13Q14004 1512 aaKnown RBP15.92■□□□□ 0.14
TP53-223ENST00000618944 EPRSP07814 1512 aaKnown RBP15.92■□□□□ 0.14
TP53-223ENST00000618944 ADAMTS12P58397 1594 aa15.91■□□□□ 0.14
TP53-223ENST00000618944 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
TP53-223ENST00000618944 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
TP53-223ENST00000618944 FBLN2P98095 1184 aa15.87■□□□□ 0.13
TP53-223ENST00000618944 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
TP53-223ENST00000618944 FOXD1Q16676 465 aa15.87■□□□□ 0.13
TP53-223ENST00000618944 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
TP53-223ENST00000618944 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
TP53-223ENST00000618944 ANP32CO43423 234 aa15.84■□□□□ 0.13
TP53-223ENST00000618944 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
TP53-223ENST00000618944 MPHOSPH9Q99550 1183 aa15.84■□□□□ 0.13
TP53-223ENST00000618944 TCOF1Q13428 1488 aaKnown RBP15.83■□□□□ 0.13
TP53-223ENST00000618944 WDR62O43379 1518 aa15.82■□□□□ 0.12
TP53-223ENST00000618944 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
TP53-223ENST00000618944 DISP1Q96F81 1524 aa15.81■□□□□ 0.12
TP53-223ENST00000618944 MIA2Q96PC5 1412 aa15.81■□□□□ 0.12
TP53-223ENST00000618944 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
TP53-223ENST00000618944 KDM6BO15054 1643 aa15.79■□□□□ 0.12
TP53-223ENST00000618944 CDK11AQ9UQ88 783 aaPredicted RBP15.79■□□□□ 0.12
TP53-223ENST00000618944 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
TP53-223ENST00000618944 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
TP53-223ENST00000618944 L3MBTL2Q969R5 705 aa15.76■□□□□ 0.11
TP53-223ENST00000618944 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
TP53-223ENST00000618944 NUP153P49790 1475 aaKnown RBP15.76■□□□□ 0.11
TP53-223ENST00000618944 HSPA5P11021 654 aaKnown RBP15.76■□□□□ 0.11
TP53-223ENST00000618944 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
TP53-223ENST00000618944 KIAA0556O60303 1618 aa15.75■□□□□ 0.11
TP53-223ENST00000618944 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
TP53-223ENST00000618944 KDM5BQ9UGL1 1544 aa15.74■□□□□ 0.11
TP53-223ENST00000618944 ABCC5O15440 1437 aa15.74■□□□□ 0.11
TP53-223ENST00000618944 DAPK1P53355 1430 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms