RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
CLIC1-210ENST00000616760 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
CLIC1-210ENST00000616760 SPDYE2BA6NHP3 402 aa17.69■□□□□ 0.42
CLIC1-210ENST00000616760 SPDYE6P0CI01 402 aa17.69■□□□□ 0.42
CLIC1-210ENST00000616760 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
CLIC1-210ENST00000616760 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
CLIC1-210ENST00000616760 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
CLIC1-210ENST00000616760 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
CLIC1-210ENST00000616760 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
CLIC1-210ENST00000616760 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
CLIC1-210ENST00000616760 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
CLIC1-210ENST00000616760 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
CLIC1-210ENST00000616760 DNMBPQ6XZF7 1577 aa17.65■□□□□ 0.42
CLIC1-210ENST00000616760 CHD1O14646 1710 aa17.58■□□□□ 0.41
CLIC1-210ENST00000616760 ARHGEF11O15085 1522 aa17.58■□□□□ 0.41
CLIC1-210ENST00000616760 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
CLIC1-210ENST00000616760 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
CLIC1-210ENST00000616760 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
CLIC1-210ENST00000616760 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
CLIC1-210ENST00000616760 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
CLIC1-210ENST00000616760 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
CLIC1-210ENST00000616760 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.391e-9■■■■■ 31.5
CLIC1-210ENST00000616760 SPDYE4A6NLX3 237 aa17.4■□□□□ 0.38
CLIC1-210ENST00000616760 SOGA1O94964 1423 aa17.38■□□□□ 0.37
CLIC1-210ENST00000616760 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
CLIC1-210ENST00000616760 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
CLIC1-210ENST00000616760 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
CLIC1-210ENST00000616760 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
CLIC1-210ENST00000616760 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
CLIC1-210ENST00000616760 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
CLIC1-210ENST00000616760 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
CLIC1-210ENST00000616760 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.37
CLIC1-210ENST00000616760 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
CLIC1-210ENST00000616760 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
CLIC1-210ENST00000616760 PBRM1Q86U86 1689 aa17.3■□□□□ 0.36
CLIC1-210ENST00000616760 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
CLIC1-210ENST00000616760 CUX1P39880 1505 aa17.3■□□□□ 0.36
CLIC1-210ENST00000616760 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
CLIC1-210ENST00000616760 PITPNM1O00562 1244 aa17.27■□□□□ 0.36
CLIC1-210ENST00000616760 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
CLIC1-210ENST00000616760 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
CLIC1-210ENST00000616760 SPDYE1Q8NFV5 336 aaPredicted RBP17.23■□□□□ 0.35
CLIC1-210ENST00000616760 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
CLIC1-210ENST00000616760 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
CLIC1-210ENST00000616760 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
CLIC1-210ENST00000616760 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
CLIC1-210ENST00000616760 FKBP8Q14318 412 aa17.15■□□□□ 0.34
CLIC1-210ENST00000616760 PROM2Q8N271 834 aa17.09■□□□□ 0.33
CLIC1-210ENST00000616760 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
CLIC1-210ENST00000616760 POTEHQ6S545 545 aa17.08■□□□□ 0.32
CLIC1-210ENST00000616760 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
CLIC1-210ENST00000616760 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
CLIC1-210ENST00000616760 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.329e-8■□□□□ 9
CLIC1-210ENST00000616760 TOP2BQ02880 1626 aa17.05■□□□□ 0.32
CLIC1-210ENST00000616760 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
CLIC1-210ENST00000616760 PIP4P2Q8N4L2 257 aa17.01■□□□□ 0.31
CLIC1-210ENST00000616760 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
CLIC1-210ENST00000616760 SHROOM2Q13796 1616 aa17■□□□□ 0.31
CLIC1-210ENST00000616760 NUP160Q12769 1436 aa17■□□□□ 0.31
CLIC1-210ENST00000616760 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
CLIC1-210ENST00000616760 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
CLIC1-210ENST00000616760 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
CLIC1-210ENST00000616760 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
CLIC1-210ENST00000616760 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
CLIC1-210ENST00000616760 KIF13AQ9H1H9 1805 aa16.88■□□□□ 0.29
CLIC1-210ENST00000616760 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
CLIC1-210ENST00000616760 PRKAR2AP13861 404 aaKnown RBP16.83■□□□□ 0.28
CLIC1-210ENST00000616760 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.28
CLIC1-210ENST00000616760 CHADLQ6NUI6 762 aa16.77■□□□□ 0.28
CLIC1-210ENST00000616760 CUL7Q14999 1698 aa16.77■□□□□ 0.28
CLIC1-210ENST00000616760 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
CLIC1-210ENST00000616760 MAPKBP1O60336 1514 aa16.74■□□□□ 0.27
CLIC1-210ENST00000616760 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLIC1-210ENST00000616760 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
CLIC1-210ENST00000616760 ABCC10Q5T3U5 1492 aa16.7■□□□□ 0.26
CLIC1-210ENST00000616760 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
CLIC1-210ENST00000616760 DIP2BQ9P265 1576 aa16.69■□□□□ 0.26
CLIC1-210ENST00000616760 CREBZFQ9NS37 354 aa16.69■□□□□ 0.26
CLIC1-210ENST00000616760 KIF27Q86VH2 1401 aa16.68■□□□□ 0.26
CLIC1-210ENST00000616760 FAM69CQ0P6D2 419 aa16.64■□□□□ 0.25
CLIC1-210ENST00000616760 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
CLIC1-210ENST00000616760 TSPOAP1O95153 1857 aa16.62■□□□□ 0.25
CLIC1-210ENST00000616760 KDM6BO15054 1643 aa16.62■□□□□ 0.25
CLIC1-210ENST00000616760 IGF1RP08069 1367 aa16.61■□□□□ 0.25
CLIC1-210ENST00000616760 FARP1Q9Y4F1 1045 aaPredicted RBP16.59■□□□□ 0.25
CLIC1-210ENST00000616760 CARMIL2Q6F5E8 1435 aa16.57■□□□□ 0.24
CLIC1-210ENST00000616760 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
CLIC1-210ENST00000616760 PTPRGP23470 1445 aa16.54■□□□□ 0.24
CLIC1-210ENST00000616760 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
CLIC1-210ENST00000616760 HAX1O00165 279 aa16.53■□□□□ 0.24
CLIC1-210ENST00000616760 MIER1Q8N108 512 aa16.53■□□□□ 0.24
CLIC1-210ENST00000616760 ABCC2Q92887 1545 aa16.52■□□□□ 0.24
CLIC1-210ENST00000616760 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
CLIC1-210ENST00000616760 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
CLIC1-210ENST00000616760 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
CLIC1-210ENST00000616760 GLI2P10070 1586 aa16.48■□□□□ 0.23
CLIC1-210ENST00000616760 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
CLIC1-210ENST00000616760 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
CLIC1-210ENST00000616760 UHRF1BP1LA0JNW5 1464 aa16.47■□□□□ 0.23
CLIC1-210ENST00000616760 PPRC1Q5VV67 1664 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms