RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 OSCARQ8IYS5 282 aa9.96□□□□□ -0.82
RFC3-203ENST00000616236 ARXQ96QS3 562 aa9.96□□□□□ -0.82
RFC3-203ENST00000616236 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
RFC3-203ENST00000616236 RNF25Q96BH1 459 aaPredicted RBP9.94□□□□□ -0.82
RFC3-203ENST00000616236 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
RFC3-203ENST00000616236 GTPBP6O43824 516 aaPredicted RBP9.91□□□□□ -0.82
RFC3-203ENST00000616236 TMEM132AQ24JP5 1023 aa9.91□□□□□ -0.82
RFC3-203ENST00000616236 DAXXQ9UER7 740 aaPredicted RBP9.9□□□□□ -0.82
RFC3-203ENST00000616236 GSE1Q14687 1217 aa9.86□□□□□ -0.83
RFC3-203ENST00000616236 RIOK3O14730 519 aaKnown RBP9.84□□□□□ -0.83
RFC3-203ENST00000616236 C14orf37Q86TY3 774 aa9.81□□□□□ -0.84
RFC3-203ENST00000616236 STK25O00506 426 aa9.8□□□□□ -0.84
RFC3-203ENST00000616236 DSG3P32926 999 aa9.79□□□□□ -0.84
RFC3-203ENST00000616236 NUBP1P53384 320 aa9.78□□□□□ -0.84
RFC3-203ENST00000616236 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
RFC3-203ENST00000616236 HOMEZQ8IX15 550 aa9.76□□□□□ -0.85
RFC3-203ENST00000616236 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
RFC3-203ENST00000616236 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
RFC3-203ENST00000616236 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
RFC3-203ENST00000616236 RYDENQ9NUL5 291 aaKnown RBP9.69□□□□□ -0.86
RFC3-203ENST00000616236 STK24Q9Y6E0 443 aa9.69□□□□□ -0.86
RFC3-203ENST00000616236 LMOD2Q6P5Q4 547 aa9.68□□□□□ -0.86
RFC3-203ENST00000616236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.67□□□□□ -0.86
RFC3-203ENST00000616236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
RFC3-203ENST00000616236 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
RFC3-203ENST00000616236 SGIP1Q9BQI5 828 aa9.66□□□□□ -0.86
RFC3-203ENST00000616236 FAM212AQ96EL1 285 aa9.65□□□□□ -0.86
RFC3-203ENST00000616236 CHRM1P11229 460 aaPredicted RBP9.64□□□□□ -0.87
RFC3-203ENST00000616236 KCNV2Q8TDN2 545 aa9.64□□□□□ -0.87
RFC3-203ENST00000616236 BRPF1P55201 1214 aaPredicted RBP9.63□□□□□ -0.87
RFC3-203ENST00000616236 WDR70Q9NW82 654 aa9.62□□□□□ -0.87
RFC3-203ENST00000616236 CADPS2Q86UW7 1296 aa9.59□□□□□ -0.87
RFC3-203ENST00000616236 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
RFC3-203ENST00000616236 RASEFQ8IZ41 740 aa9.56□□□□□ -0.88
RFC3-203ENST00000616236 CREBZFQ9NS37 354 aa9.55□□□□□ -0.88
RFC3-203ENST00000616236 PYGBP11216 843 aa9.54□□□□□ -0.88
RFC3-203ENST00000616236 MNX1P50219 401 aaPredicted RBP9.54□□□□□ -0.88
RFC3-203ENST00000616236 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
RFC3-203ENST00000616236 ZC3H15Q8WU90 426 aaKnown RBP9.53□□□□□ -0.88
RFC3-203ENST00000616236 SPDYE1Q8NFV5 336 aaPredicted RBP9.49□□□□□ -0.89
RFC3-203ENST00000616236 SLC24A3Q9HC58 644 aa9.48□□□□□ -0.89
RFC3-203ENST00000616236 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
RFC3-203ENST00000616236 ARHGEF1Q92888 912 aaKnown RBP9.45□□□□□ -0.9
RFC3-203ENST00000616236 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
RFC3-203ENST00000616236 TESPA1A2RU30 521 aaPredicted RBP9.41□□□□□ -0.9
RFC3-203ENST00000616236 SEMA3EO15041 775 aa9.41□□□□□ -0.9
RFC3-203ENST00000616236 E2F4Q16254 413 aa9.39□□□□□ -0.91
RFC3-203ENST00000616236 ZNF467Q7Z7K2 595 aaPredicted RBP9.38□□□□□ -0.91
RFC3-203ENST00000616236 MFRPQ9BY79 579 aa9.38□□□□□ -0.91
RFC3-203ENST00000616236 PDAP1Q13442 181 aaKnown RBP9.37□□□□□ -0.91
RFC3-203ENST00000616236 ZMYND10O75800 440 aa9.36□□□□□ -0.91
RFC3-203ENST00000616236 PPP1R37O75864 691 aa9.34□□□□□ -0.91
RFC3-203ENST00000616236 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
RFC3-203ENST00000616236 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
RFC3-203ENST00000616236 PCDHB8Q9UN66 801 aa9.32□□□□□ -0.92
RFC3-203ENST00000616236 PCDHB13Q9Y5F0 798 aa9.32□□□□□ -0.92
RFC3-203ENST00000616236 UBTFP17480 764 aaKnown RBP9.31□□□□□ -0.92
RFC3-203ENST00000616236 SMYD5Q6GMV2 418 aa9.3□□□□□ -0.92
RFC3-203ENST00000616236 TSPYL2Q9H2G4 693 aaPredicted RBP9.3□□□□□ -0.92
RFC3-203ENST00000616236 PSEN1P49768 467 aa9.29□□□□□ -0.92
RFC3-203ENST00000616236 BARGINQ6ZT62 677 aa9.29□□□□□ -0.92
RFC3-203ENST00000616236 REM2Q8IYK8 340 aaPredicted RBP9.28□□□□□ -0.92
RFC3-203ENST00000616236 ZMYND15Q9H091 742 aa9.27□□□□□ -0.93
RFC3-203ENST00000616236 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
RFC3-203ENST00000616236 GPBP1L1Q9HC44 474 aaPredicted RBP9.26□□□□□ -0.93
RFC3-203ENST00000616236 RBM42Q9BTD8 480 aaKnown RBP9.25□□□□□ -0.93
RFC3-203ENST00000616236 NLRP6P59044 892 aa9.24□□□□□ -0.93
RFC3-203ENST00000616236 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
RFC3-203ENST00000616236 AK7Q96M32 723 aa9.24□□□□□ -0.93
RFC3-203ENST00000616236 NCKAP5LQ9HCH0 1330 aa9.23□□□□□ -0.93
RFC3-203ENST00000616236 EFCAB3Q8N7B9 438 aa9.22□□□□□ -0.93
RFC3-203ENST00000616236 ZNF579Q8NAF0 562 aaKnown RBP9.22□□□□□ -0.93
RFC3-203ENST00000616236 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
RFC3-203ENST00000616236 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
RFC3-203ENST00000616236 PHF8Q9UPP1 1060 aa9.22□□□□□ -0.93
RFC3-203ENST00000616236 SOX12O15370 315 aa9.19□□□□□ -0.94
RFC3-203ENST00000616236 PDE4AP27815 886 aa9.19□□□□□ -0.94
RFC3-203ENST00000616236 RANGAP1P46060 587 aaPredicted RBP9.19□□□□□ -0.94
RFC3-203ENST00000616236 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
RFC3-203ENST00000616236 KRI1Q8N9T8 703 aaKnown RBP9.19□□□□□ -0.94
RFC3-203ENST00000616236 ARIH1Q9Y4X5 557 aaPredicted RBP9.19□□□□□ -0.94
RFC3-203ENST00000616236 MFSD10Q14728 455 aa9.18□□□□□ -0.94
RFC3-203ENST00000616236 RBM26Q5T8P6 1007 aaKnown RBP9.18□□□□□ -0.94
RFC3-203ENST00000616236 KDM4CQ9H3R0 1056 aa9.18□□□□□ -0.94
RFC3-203ENST00000616236 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
RFC3-203ENST00000616236 GPIHBP1Q8IV16 184 aa9.17□□□□□ -0.94
RFC3-203ENST00000616236 PITPNM1O00562 1244 aa9.16□□□□□ -0.94
RFC3-203ENST00000616236 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
RFC3-203ENST00000616236 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
RFC3-203ENST00000616236 MLLT3P42568 568 aaPredicted RBP9.14□□□□□ -0.95
RFC3-203ENST00000616236 DDX27Q96GQ7 796 aaKnown RBP9.14□□□□□ -0.95
RFC3-203ENST00000616236 ARID3AQ99856 593 aa9.14□□□□□ -0.95
RFC3-203ENST00000616236 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
RFC3-203ENST00000616236 TRIM66O15016 1216 aa9.13□□□□□ -0.95
RFC3-203ENST00000616236 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
RFC3-203ENST00000616236 HRCP23327 699 aa9.12□□□□□ -0.95
RFC3-203ENST00000616236 PDE4DQ08499 809 aa9.12□□□□□ -0.95
RFC3-203ENST00000616236 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
RFC3-203ENST00000616236 FARP1Q9Y4F1 1045 aaPredicted RBP9.11□□□□□ -0.95
RFC3-203ENST00000616236 MKRN3Q13064 507 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms