RNA–Protein interactions for RNA: ENST00000615771.5

RBM39-244, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-244ENST00000615771 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
RBM39-244ENST00000615771 NUBP1P53384 320 aa14.84□□□□□ -0.03
RBM39-244ENST00000615771 DCBLD2Q96PD2 775 aa14.84□□□□□ -0.03
RBM39-244ENST00000615771 MS4A3Q96HJ5 214 aa14.78□□□□□ -0.04
RBM39-244ENST00000615771 KIF12Q96FN5 646 aa14.77□□□□□ -0.05
RBM39-244ENST00000615771 FAM212AQ96EL1 285 aa14.73□□□□□ -0.05
RBM39-244ENST00000615771 MAP3K13O43283 966 aa14.67□□□□□ -0.06
RBM39-244ENST00000615771 ASTLQ6HA08 431 aaPredicted RBP14.66□□□□□ -0.06
RBM39-244ENST00000615771 KLHL34Q8N239 644 aa14.65□□□□□ -0.06
RBM39-244ENST00000615771 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
RBM39-244ENST00000615771 LHX8Q68G74 356 aa14.64□□□□□ -0.07
RBM39-244ENST00000615771 ATMINO43313 823 aaPredicted RBP14.6□□□□□ -0.07
RBM39-244ENST00000615771 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
RBM39-244ENST00000615771 IFNLR1Q8IU57 520 aaPredicted RBP14.59□□□□□ -0.07
RBM39-244ENST00000615771 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
RBM39-244ENST00000615771 PCDHB13Q9Y5F0 798 aa14.57□□□□□ -0.08
RBM39-244ENST00000615771 TIE1P35590 1138 aa14.56□□□□□ -0.08
RBM39-244ENST00000615771 GSE1Q14687 1217 aa14.54□□□□□ -0.08
RBM39-244ENST00000615771 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
RBM39-244ENST00000615771 BMP2KQ9NSY1 1161 aaPredicted RBP14.53□□□□□ -0.08
RBM39-244ENST00000615771 SPOCK2Q92563 424 aa14.52□□□□□ -0.09
RBM39-244ENST00000615771 ATN1P54259 1190 aaPredicted RBP14.51□□□□□ -0.09
RBM39-244ENST00000615771 IFNL1Q8IU54 200 aa14.5□□□□□ -0.09
RBM39-244ENST00000615771 SLC39A7Q92504 469 aa14.5□□□□□ -0.09
RBM39-244ENST00000615771 C7P10643 843 aa14.48□□□□□ -0.09
RBM39-244ENST00000615771 PYGBP11216 843 aa14.48□□□□□ -0.09
RBM39-244ENST00000615771 METRNQ9UJH8 293 aa14.47□□□□□ -0.09
RBM39-244ENST00000615771 TTLL13PA6NNM8 815 aa14.45□□□□□ -0.1
RBM39-244ENST00000615771 CHRM1P11229 460 aaPredicted RBP14.43□□□□□ -0.1
RBM39-244ENST00000615771 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
RBM39-244ENST00000615771 ZNF467Q7Z7K2 595 aaPredicted RBP14.35□□□□□ -0.11
RBM39-244ENST00000615771 TMEM106CQ9BVX2 250 aa14.35□□□□□ -0.11
RBM39-244ENST00000615771 TRIM35Q9UPQ4 493 aa14.35□□□□□ -0.11
RBM39-244ENST00000615771 IER5LQ5T953 404 aa14.34□□□□□ -0.11
RBM39-244ENST00000615771 PCDHB8Q9UN66 801 aa14.34□□□□□ -0.11
RBM39-244ENST00000615771 CIZ1Q9ULV3 898 aaPredicted RBP14.32□□□□□ -0.12
RBM39-244ENST00000615771 POTEFA5A3E0 1075 aa14.29□□□□□ -0.12
RBM39-244ENST00000615771 OTUD5Q96G74 571 aa14.28□□□□□ -0.12
RBM39-244ENST00000615771 TRIM41Q8WV44 630 aa14.27□□□□□ -0.13
RBM39-244ENST00000615771 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
RBM39-244ENST00000615771 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
RBM39-244ENST00000615771 SEC24BO95487 1268 aa14.22□□□□□ -0.13
RBM39-244ENST00000615771 MAMSTRQ6ZN01 415 aa14.22□□□□□ -0.13
RBM39-244ENST00000615771 PSEN1P49768 467 aa14.17□□□□□ -0.14
RBM39-244ENST00000615771 IRX5P78411 483 aaPredicted RBP14.17□□□□□ -0.14
RBM39-244ENST00000615771 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
RBM39-244ENST00000615771 PLCG2P16885 1265 aa14.13□□□□□ -0.15
RBM39-244ENST00000615771 SCUBE2Q9NQ36 999 aa14.13□□□□□ -0.15
RBM39-244ENST00000615771 OCEL1Q9H607 264 aa14.1□□□□□ -0.15
RBM39-244ENST00000615771 GOLGA2Q08379 1002 aa14.08□□□□□ -0.16
RBM39-244ENST00000615771 MKRN3Q13064 507 aaKnown RBP14.05□□□□□ -0.16
RBM39-244ENST00000615771 RIOK3O14730 519 aaKnown RBP14.02□□□□□ -0.17
RBM39-244ENST00000615771 RNF25Q96BH1 459 aaPredicted RBP14.02□□□□□ -0.17
RBM39-244ENST00000615771 PDCD7Q8N8D1 485 aaKnown RBP14.01□□□□□ -0.17
RBM39-244ENST00000615771 ILDR1Q86SU0 546 aaPredicted RBP14□□□□□ -0.17
RBM39-244ENST00000615771 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
RBM39-244ENST00000615771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.173e-28■■□□□ 13.4
RBM39-244ENST00000615771 VGFO15240 615 aaPredicted RBP13.95□□□□□ -0.18
RBM39-244ENST00000615771 PKD2Q13563 968 aa13.9□□□□□ -0.18
RBM39-244ENST00000615771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.89□□□□□ -0.19
RBM39-244ENST00000615771 L3MBTL3Q96JM7 780 aaPredicted RBP13.89□□□□□ -0.19
RBM39-244ENST00000615771 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
RBM39-244ENST00000615771 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
RBM39-244ENST00000615771 ECM2O94769 699 aaPredicted RBP13.88□□□□□ -0.19
RBM39-244ENST00000615771 SLAIN1Q8ND83 568 aa13.87□□□□□ -0.19
RBM39-244ENST00000615771 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
RBM39-244ENST00000615771 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.84□□□□□ -0.19
RBM39-244ENST00000615771 SOX12O15370 315 aa13.8□□□□□ -0.2
RBM39-244ENST00000615771 LCE2DQ5TA82 110 aaPredicted RBP13.8□□□□□ -0.2
RBM39-244ENST00000615771 DPY19L2Q6NUT2 758 aa13.79□□□□□ -0.2
RBM39-244ENST00000615771 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
RBM39-244ENST00000615771 RGL2O15211 777 aa13.77□□□□□ -0.21
RBM39-244ENST00000615771 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
RBM39-244ENST00000615771 BOLA1Q9Y3E2 137 aa13.76□□□□□ -0.21
RBM39-244ENST00000615771 POTEMA6NI47 508 aa13.75□□□□□ -0.21
RBM39-244ENST00000615771 FAM163AQ96GL9 167 aaPredicted RBP13.75□□□□□ -0.21
RBM39-244ENST00000615771 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
RBM39-244ENST00000615771 G3V3G9 751 aa13.72□□□□□ -0.21
RBM39-244ENST00000615771 TMEM121BQ9BXQ6 578 aaPredicted RBP13.72□□□□□ -0.21
RBM39-244ENST00000615771 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
RBM39-244ENST00000615771 STK25O00506 426 aa13.7□□□□□ -0.22
RBM39-244ENST00000615771 SNPHO15079 494 aa13.69□□□□□ -0.22
RBM39-244ENST00000615771 MS4A4AQ96JQ5 239 aa13.69□□□□□ -0.22
RBM39-244ENST00000615771 PHF8Q9UPP1 1060 aa13.68□□□□□ -0.22
RBM39-244ENST00000615771 NLRP6P59044 892 aa13.65□□□□□ -0.22
RBM39-244ENST00000615771 FBXO22Q8NEZ5 403 aa13.64□□□□□ -0.23
RBM39-244ENST00000615771 ST18O60284 1047 aa13.63□□□□□ -0.23
RBM39-244ENST00000615771 MICALL2Q8IY33 904 aa13.62□□□□□ -0.23
RBM39-244ENST00000615771 MFRPQ9BY79 579 aa13.61□□□□□ -0.23
RBM39-244ENST00000615771 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
RBM39-244ENST00000615771 HS6ST3Q8IZP7 471 aa13.54□□□□□ -0.24
RBM39-244ENST00000615771 TMEM92Q6UXU6 159 aa13.5□□□□□ -0.25
RBM39-244ENST00000615771 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
RBM39-244ENST00000615771 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
RBM39-244ENST00000615771 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
RBM39-244ENST00000615771 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
RBM39-244ENST00000615771 CDAN1Q8IWY9 1227 aa13.4□□□□□ -0.26
RBM39-244ENST00000615771 MARVELD3Q96A59 401 aa13.4□□□□□ -0.26
RBM39-244ENST00000615771 EMP3P54852 163 aa13.37□□□□□ -0.27
RBM39-244ENST00000615771 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms