RNA–Protein interactions for RNA: ENST00000615771.5

RBM39-244, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-244ENST00000615771 AEBP2Q6ZN18 517 aaPredicted RBP29.84■■■□□ 2.37
RBM39-244ENST00000615771 CHIC1Q5VXU3 224 aa28.66■■■□□ 2.18
RBM39-244ENST00000615771 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
RBM39-244ENST00000615771 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
RBM39-244ENST00000615771 FOXD1Q16676 465 aa23.64■■□□□ 1.37
RBM39-244ENST00000615771 PLPPR3Q6T4P5 718 aa23.04■■□□□ 1.28
RBM39-244ENST00000615771 PPP6R1Q9UPN7 881 aa22.31■■□□□ 1.16
RBM39-244ENST00000615771 ADRA2BP18089 450 aa22.23■■□□□ 1.15
RBM39-244ENST00000615771 PIAS4Q8N2W9 510 aaPredicted RBP22.16■■□□□ 1.14
RBM39-244ENST00000615771 MSH5O43196 834 aa22.07■■□□□ 1.12
RBM39-244ENST00000615771 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
RBM39-244ENST00000615771 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
RBM39-244ENST00000615771 MAPK8IP2Q13387 824 aaPredicted RBP20.32■□□□□ 0.84
RBM39-244ENST00000615771 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
RBM39-244ENST00000615771 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
RBM39-244ENST00000615771 CNKSR2Q8WXI2 1034 aa19.79■□□□□ 0.76
RBM39-244ENST00000615771 HOXD11P31277 338 aaPredicted RBP19.62■□□□□ 0.73
RBM39-244ENST00000615771 RNF216Q9NWF9 866 aaPredicted RBP19.55■□□□□ 0.72
RBM39-244ENST00000615771 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
RBM39-244ENST00000615771 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
RBM39-244ENST00000615771 NPM3O75607 178 aaKnown RBP19.23■□□□□ 0.67
RBM39-244ENST00000615771 KCNA4P22459 653 aa19.09■□□□□ 0.65
RBM39-244ENST00000615771 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
RBM39-244ENST00000615771 RNF39Q9H2S5 420 aa18.85■□□□□ 0.61
RBM39-244ENST00000615771 CACNB1Q02641 598 aaPredicted RBP18.69■□□□□ 0.58
RBM39-244ENST00000615771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.577e-13■■□□□ 11.7
RBM39-244ENST00000615771 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
RBM39-244ENST00000615771 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
RBM39-244ENST00000615771 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
RBM39-244ENST00000615771 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
RBM39-244ENST00000615771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
RBM39-244ENST00000615771 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
RBM39-244ENST00000615771 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
RBM39-244ENST00000615771 APLP2Q06481 763 aa17.86■□□□□ 0.45
RBM39-244ENST00000615771 CAPN15O75808 1086 aa17.84■□□□□ 0.45
RBM39-244ENST00000615771 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
RBM39-244ENST00000615771 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
RBM39-244ENST00000615771 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
RBM39-244ENST00000615771 DSG3P32926 999 aa17.73■□□□□ 0.43
RBM39-244ENST00000615771 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
RBM39-244ENST00000615771 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
RBM39-244ENST00000615771 ZBTB22O15209 634 aa17.58■□□□□ 0.4
RBM39-244ENST00000615771 ABCB7O75027 752 aa17.44■□□□□ 0.38
RBM39-244ENST00000615771 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
RBM39-244ENST00000615771 ATXN8OSP0DMR3 200 aa17.25■□□□□ 0.35
RBM39-244ENST00000615771 POLA2Q14181 598 aa17.24■□□□□ 0.35
RBM39-244ENST00000615771 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.32
RBM39-244ENST00000615771 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
RBM39-244ENST00000615771 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
RBM39-244ENST00000615771 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
RBM39-244ENST00000615771 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
RBM39-244ENST00000615771 FBLN2P98095 1184 aa16.65■□□□□ 0.26
RBM39-244ENST00000615771 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
RBM39-244ENST00000615771 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
RBM39-244ENST00000615771 POTEHQ6S545 545 aa16.51■□□□□ 0.23
RBM39-244ENST00000615771 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
RBM39-244ENST00000615771 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
RBM39-244ENST00000615771 SPDYE2Q495Y8 402 aa16.48■□□□□ 0.23
RBM39-244ENST00000615771 CHRDL2Q6WN34 429 aa16.42■□□□□ 0.22
RBM39-244ENST00000615771 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
RBM39-244ENST00000615771 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
RBM39-244ENST00000615771 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.2
RBM39-244ENST00000615771 PITPNM1O00562 1244 aa16.23■□□□□ 0.19
RBM39-244ENST00000615771 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
RBM39-244ENST00000615771 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
RBM39-244ENST00000615771 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.165e-6■□□□□ 9.5
RBM39-244ENST00000615771 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.166e-8■□□□□ 8.5
RBM39-244ENST00000615771 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
RBM39-244ENST00000615771 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
RBM39-244ENST00000615771 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
RBM39-244ENST00000615771 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
RBM39-244ENST00000615771 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
RBM39-244ENST00000615771 HAX1O00165 279 aa15.67■□□□□ 0.1
RBM39-244ENST00000615771 PROM2Q8N271 834 aa15.67■□□□□ 0.1
RBM39-244ENST00000615771 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
RBM39-244ENST00000615771 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
RBM39-244ENST00000615771 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
RBM39-244ENST00000615771 EVX2Q03828 476 aa15.5■□□□□ 0.07
RBM39-244ENST00000615771 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
RBM39-244ENST00000615771 FARP1Q9Y4F1 1045 aaPredicted RBP15.5■□□□□ 0.07
RBM39-244ENST00000615771 FKBP8Q14318 412 aa15.39■□□□□ 0.05
RBM39-244ENST00000615771 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
RBM39-244ENST00000615771 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
RBM39-244ENST00000615771 NPM1P06748 294 aaKnown RBP eCLIP15.24■□□□□ 0.03
RBM39-244ENST00000615771 GABBR2O75899 941 aa15.2■□□□□ 0.02
RBM39-244ENST00000615771 CLCN6P51797 869 aa15.17■□□□□ 0.02
RBM39-244ENST00000615771 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
RBM39-244ENST00000615771 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
RBM39-244ENST00000615771 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
RBM39-244ENST00000615771 MIER1Q8N108 512 aa15.12■□□□□ 0.01
RBM39-244ENST00000615771 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
RBM39-244ENST00000615771 FBXO3Q9UK99 471 aa15.06■□□□□ 0
RBM39-244ENST00000615771 PLCD3Q8N3E9 789 aa15.05■□□□□ -0
RBM39-244ENST00000615771 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
RBM39-244ENST00000615771 PHF12Q96QT6 1004 aa14.95□□□□□ -0.02
RBM39-244ENST00000615771 RASEFQ8IZ41 740 aa14.89□□□□□ -0.03
RBM39-244ENST00000615771 TSPYL2Q9H2G4 693 aaPredicted RBP14.89□□□□□ -0.03
RBM39-244ENST00000615771 CCDC61Q9Y6R9 512 aa14.89□□□□□ -0.03
RBM39-244ENST00000615771 GALR2O43603 387 aaPredicted RBP14.88□□□□□ -0.03
RBM39-244ENST00000615771 POTEIP0CG38 1075 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms