RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 MRS2Q9HD23 443 aa6.05□□□□□ -1.44
CHD9-221ENST00000615216 KIF27Q86VH2 1401 aa6.04□□□□□ -1.44
CHD9-221ENST00000615216 EIF4G2P78344 907 aaKnown RBP eCLIP6.03□□□□□ -1.44
CHD9-221ENST00000615216 CDCA8Q53HL2 280 aa6.03□□□□□ -1.44
CHD9-221ENST00000615216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.02□□□□□ -1.451e-7■■■■□ 23.5
CHD9-221ENST00000615216 WRNQ14191 1432 aaPredicted RBP eCLIP6.02□□□□□ -1.457e-6■■■■■ 31.3
CHD9-221ENST00000615216 GOLGA6L22H0YM25 854 aa6.01□□□□□ -1.45
CHD9-221ENST00000615216 CASC1Q6TDU7 716 aa6.01□□□□□ -1.45
CHD9-221ENST00000615216 NCLP19338 710 aaKnown RBP6.01□□□□□ -1.45
CHD9-221ENST00000615216 CHIC2Q9UKJ5 165 aa6.01□□□□□ -1.45
CHD9-221ENST00000615216 NBR1Q14596 966 aa6.01□□□□□ -1.45
CHD9-221ENST00000615216 TNIKQ9UKE5 1360 aa6.01□□□□□ -1.45
CHD9-221ENST00000615216 FHAD1B1AJZ9 1412 aa6□□□□□ -1.45
CHD9-221ENST00000615216 CDK11BP21127 795 aaKnown RBP6□□□□□ -1.45
CHD9-221ENST00000615216 CHMP7Q8WUX9 453 aaPredicted RBP6□□□□□ -1.45
CHD9-221ENST00000615216 MYO15BQ96JP2 1530 aa6□□□□□ -1.45
CHD9-221ENST00000615216 CFAP53Q96M91 514 aa6□□□□□ -1.45
CHD9-221ENST00000615216 KDM2AQ9Y2K7 1162 aa5.98□□□□□ -1.45
CHD9-221ENST00000615216 TRIM44Q96DX7 344 aaPredicted RBP5.98□□□□□ -1.45
CHD9-221ENST00000615216 CHMP4BQ9H444 224 aaKnown RBP5.98□□□□□ -1.45
CHD9-221ENST00000615216 MIER1Q8N108 512 aa5.97□□□□□ -1.45
CHD9-221ENST00000615216 SALL2Q9Y467 1007 aaPredicted RBP5.97□□□□□ -1.45
CHD9-221ENST00000615216 KNSTRNQ9Y448 316 aa5.96□□□□□ -1.45
CHD9-221ENST00000615216 PPP1R15AO75807 674 aaPredicted RBP5.96□□□□□ -1.46
CHD9-221ENST00000615216 PLEKHD1A6NEE1 506 aa5.96□□□□□ -1.46
CHD9-221ENST00000615216 SMARCA2P51531 1590 aa5.96□□□□□ -1.46
CHD9-221ENST00000615216 FTSJ3Q8IY81 847 aaKnown RBP5.95□□□□□ -1.46
CHD9-221ENST00000615216 SCAF1Q9H7N4 1312 aaKnown RBP5.95□□□□□ -1.46
CHD9-221ENST00000615216 MS4A1P11836 297 aa5.95□□□□□ -1.46
CHD9-221ENST00000615216 PPM1GO15355 546 aaPredicted RBP5.95□□□□□ -1.46
CHD9-221ENST00000615216 RRP7BPQ9NSQ0 103 aa5.95□□□□□ -1.46
CHD9-221ENST00000615216 TNNT2P45379 298 aaPredicted RBP5.95□□□□□ -1.46
CHD9-221ENST00000615216 ZRSR1Q15695 479 aaKnown RBP5.95□□□□□ -1.46
CHD9-221ENST00000615216 PNNQ9H307 717 aaKnown RBP5.95□□□□□ -1.46
CHD9-221ENST00000615216 ARHGAP35Q9NRY4 1499 aa5.94□□□□□ -1.46
CHD9-221ENST00000615216 ERCC6Q03468 1493 aa5.94□□□□□ -1.46
CHD9-221ENST00000615216 EIF4G1Q04637 1599 aaKnown RBP5.94□□□□□ -1.46
CHD9-221ENST00000615216 KANK1Q14678 1352 aa5.94□□□□□ -1.46
CHD9-221ENST00000615216 GOLGA6L6A8MZA4 724 aa5.93□□□□□ -1.46
CHD9-221ENST00000615216 ARXQ96QS3 562 aa5.93□□□□□ -1.46
CHD9-221ENST00000615216 CFDP1Q9UEE9 299 aaPredicted RBP5.92□□□□□ -1.46
CHD9-221ENST00000615216 PPP4R2Q9NY27 417 aa5.92□□□□□ -1.46
CHD9-221ENST00000615216 CCNB3Q8WWL7 1395 aa5.92□□□□□ -1.46
CHD9-221ENST00000615216 MAPK8IP3Q9UPT6 1336 aa5.92□□□□□ -1.46
CHD9-221ENST00000615216 PTMAP06454 111 aaKnown RBP5.92□□□□□ -1.46
CHD9-221ENST00000615216 IRX6P78412 446 aaPredicted RBP5.92□□□□□ -1.46
CHD9-221ENST00000615216 CFAP44Q96MT7 982 aa5.92□□□□□ -1.46
CHD9-221ENST00000615216 NUDCQ9Y266 331 aa5.91□□□□□ -1.46
CHD9-221ENST00000615216 ERICH6BQ5W0A0 696 aa5.91□□□□□ -1.46
CHD9-221ENST00000615216 PLPPR3Q6T4P5 718 aa5.91□□□□□ -1.46
CHD9-221ENST00000615216 CARD11Q9BXL7 1154 aa5.91□□□□□ -1.46
CHD9-221ENST00000615216 TIMELESSQ9UNS1 1208 aa5.91□□□□□ -1.46
CHD9-221ENST00000615216 TOP2AP11388 1531 aaKnown RBP5.9□□□□□ -1.46
CHD9-221ENST00000615216 C14orf37Q86TY3 774 aa5.9□□□□□ -1.47
CHD9-221ENST00000615216 NOP58Q9Y2X3 529 aaKnown RBP5.89□□□□□ -1.47
CHD9-221ENST00000615216 SETD5Q9C0A6 1442 aa5.89□□□□□ -1.47
CHD9-221ENST00000615216 PTMSP20962 102 aa5.89□□□□□ -1.47
CHD9-221ENST00000615216 VPS8Q8N3P4 1428 aa5.89□□□□□ -1.47
CHD9-221ENST00000615216 NRDCO43847 1150 aa5.88□□□□□ -1.47
CHD9-221ENST00000615216 CCER2I3L3R5 266 aa5.88□□□□□ -1.47
CHD9-221ENST00000615216 CUX2O14529 1486 aa5.88□□□□□ -1.47
CHD9-221ENST00000615216 HSP90AB1P08238 724 aaKnown RBP5.88□□□□□ -1.47
CHD9-221ENST00000615216 ARID4BQ4LE39 1312 aaPredicted RBP5.88□□□□□ -1.47
CHD9-221ENST00000615216 HIRIP3Q9BW71 556 aaPredicted RBP5.88□□□□□ -1.47
CHD9-221ENST00000615216 ZBTB7CA1YPR0 619 aa5.87□□□□□ -1.47
CHD9-221ENST00000615216 TMF1P82094 1093 aa5.87□□□□□ -1.47
CHD9-221ENST00000615216 KCNH8Q96L42 1107 aa5.87□□□□□ -1.47
CHD9-221ENST00000615216 SUPT16HQ9Y5B9 1047 aaKnown RBP5.87□□□□□ -1.47
CHD9-221ENST00000615216 WIZO95785 1651 aa5.87□□□□□ -1.47
CHD9-221ENST00000615216 EIF3AQ14152 1382 aaKnown RBP5.87□□□□□ -1.47
CHD9-221ENST00000615216 DNTTIP2Q5QJE6 756 aaKnown RBP5.87□□□□□ -1.47
CHD9-221ENST00000615216 FMN1Q68DA7 1419 aa5.87□□□□□ -1.47
CHD9-221ENST00000615216 L1TD1Q5T7N2 865 aaKnown RBP5.87□□□□□ -1.47
CHD9-221ENST00000615216 HSCBQ8IWL3 235 aa5.86□□□□□ -1.47
CHD9-221ENST00000615216 MCCP23508 829 aa5.86□□□□□ -1.47
CHD9-221ENST00000615216 POGKQ9P215 609 aa5.86□□□□□ -1.47
CHD9-221ENST00000615216 RGL3Q3MIN7 710 aa5.86□□□□□ -1.47
CHD9-221ENST00000615216 KTN1Q86UP2 1357 aaKnown RBP5.86□□□□□ -1.47
CHD9-221ENST00000615216 ABCC8Q09428 1581 aa5.86□□□□□ -1.47
CHD9-221ENST00000615216 HAP1P54257 671 aaPredicted RBP5.86□□□□□ -1.47
CHD9-221ENST00000615216 CARMIL1Q5VZK9 1371 aa5.86□□□□□ -1.47
CHD9-221ENST00000615216 CHAF1AQ13111 956 aaPredicted RBP5.86□□□□□ -1.47
CHD9-221ENST00000615216 A0A0G2JS52 829 aa5.85□□□□□ -1.47
CHD9-221ENST00000615216 HDGFP51858 240 aaKnown RBP5.85□□□□□ -1.47
CHD9-221ENST00000615216 CARMIL2Q6F5E8 1435 aa5.85□□□□□ -1.47
CHD9-221ENST00000615216 OS9Q13438 667 aaPredicted RBP5.84□□□□□ -1.47
CHD9-221ENST00000615216 NAP1L5Q96NT1 182 aaPredicted RBP5.84□□□□□ -1.47
CHD9-221ENST00000615216 CCDC88BA6NC98 1476 aa5.84□□□□□ -1.47
CHD9-221ENST00000615216 CALD1Q05682 793 aaKnown RBP5.84□□□□□ -1.47
CHD9-221ENST00000615216 LAS1LQ9Y4W2 734 aaKnown RBP5.84□□□□□ -1.48
CHD9-221ENST00000615216 SMARCA4P51532 1647 aa5.83□□□□□ -1.48
CHD9-221ENST00000615216 FGD1P98174 961 aa5.83□□□□□ -1.48
CHD9-221ENST00000615216 CCDC18Q5T9S5 1454 aa5.82□□□□□ -1.48
CHD9-221ENST00000615216 CC2D1BQ5T0F9 858 aaKnown RBP5.82□□□□□ -1.48
CHD9-221ENST00000615216 KCNJ4P48050 445 aa5.82□□□□□ -1.48
CHD9-221ENST00000615216 RGS3P49796 1198 aa5.82□□□□□ -1.48
CHD9-221ENST00000615216 FRAT1Q92837 279 aaPredicted RBP5.82□□□□□ -1.48
CHD9-221ENST00000615216 RALBP1Q15311 655 aa5.82□□□□□ -1.48
CHD9-221ENST00000615216 ROCK2O75116 1388 aaKnown RBP5.82□□□□□ -1.48
CHD9-221ENST00000615216 IPO8O15397 1037 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms