RNA–Protein interactions for RNA: ENST00000614285.4

CACNA1A-214, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-214ENST00000614285 RTN4Q9NQC3 1192 aaKnown RBP22.6■■□□□ 1.21
CACNA1A-214ENST00000614285 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
CACNA1A-214ENST00000614285 WDR43Q15061 677 aaKnown RBP eCLIP22.55■■□□□ 1.2
CACNA1A-214ENST00000614285 FAM9BQ8IZU0 186 aa22.54■■□□□ 1.2
CACNA1A-214ENST00000614285 TMC1Q8TDI8 760 aa22.52■■□□□ 1.2
CACNA1A-214ENST00000614285 KIAA2012Q0VF49 1180 aa22.51■■□□□ 1.19
CACNA1A-214ENST00000614285 PNNQ9H307 717 aaKnown RBP22.44■■□□□ 1.18
CACNA1A-214ENST00000614285 DRC7Q8IY82 874 aa22.44■■□□□ 1.18
CACNA1A-214ENST00000614285 A0A0U1RQG5 324 aaPredicted RBP22.44■■□□□ 1.18
CACNA1A-214ENST00000614285 TONSLQ96HA7 1378 aa22.44■■□□□ 1.18
CACNA1A-214ENST00000614285 MSNP26038 577 aaKnown RBP22.43■■□□□ 1.18
CACNA1A-214ENST00000614285 CHGAP10645 457 aaKnown RBP22.41■■□□□ 1.18
CACNA1A-214ENST00000614285 ARID4BQ4LE39 1312 aaPredicted RBP22.4■■□□□ 1.18
CACNA1A-214ENST00000614285 NPHP1O15259 732 aa22.39■■□□□ 1.18
CACNA1A-214ENST00000614285 FGD1P98174 961 aa22.37■■□□□ 1.17
CACNA1A-214ENST00000614285 NAP1L2Q9ULW6 460 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-214ENST00000614285 PLEKHG5O94827 1062 aa22.35■■□□□ 1.17
CACNA1A-214ENST00000614285 FBLN2P98095 1184 aa22.35■■□□□ 1.17
CACNA1A-214ENST00000614285 ZBTB7CA1YPR0 619 aa22.34■■□□□ 1.17
CACNA1A-214ENST00000614285 GOLGA6L1Q8N7Z2 621 aa22.32■■□□□ 1.16
CACNA1A-214ENST00000614285 ARID3AQ99856 593 aa22.32■■□□□ 1.16
CACNA1A-214ENST00000614285 GOLGA6L4A6NEF3 574 aa22.28■■□□□ 1.16
CACNA1A-214ENST00000614285 SETQ01105 290 aaPredicted RBP22.27■■□□□ 1.16
CACNA1A-214ENST00000614285 GOLGA2Q08379 1002 aa22.26■■□□□ 1.15
CACNA1A-214ENST00000614285 C14orf37Q86TY3 774 aa22.25■■□□□ 1.15
CACNA1A-214ENST00000614285 HSP90AB1P08238 724 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-214ENST00000614285 PDE4CQ08493 712 aa22.23■■□□□ 1.15
CACNA1A-214ENST00000614285 PPM1GO15355 546 aaPredicted RBP22.23■■□□□ 1.15
CACNA1A-214ENST00000614285 FBXO3Q9UK99 471 aa22.23■■□□□ 1.15
CACNA1A-214ENST00000614285 USP35Q9P2H5 1018 aa22.23■■□□□ 1.15
CACNA1A-214ENST00000614285 ZNF777Q9ULD5 760 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-214ENST00000614285 IRX6P78412 446 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-214ENST00000614285 KRI1Q8N9T8 703 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-214ENST00000614285 KCNJ4P48050 445 aa22.21■■□□□ 1.15
CACNA1A-214ENST00000614285 FTSJ3Q8IY81 847 aaKnown RBP22.19■■□□□ 1.14
CACNA1A-214ENST00000614285 ISY1Q9ULR0 285 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-214ENST00000614285 KAT6BQ8WYB5 2073 aa22.14■■□□□ 1.13
CACNA1A-214ENST00000614285 GNL2Q13823 731 aaKnown RBP22.13■■□□□ 1.13
CACNA1A-214ENST00000614285 HAP1P54257 671 aaPredicted RBP22.13■■□□□ 1.13
CACNA1A-214ENST00000614285 LAS1LQ9Y4W2 734 aaKnown RBP22.1■■□□□ 1.13
CACNA1A-214ENST00000614285 CHMP4BQ9H444 224 aaKnown RBP22.09■■□□□ 1.13
CACNA1A-214ENST00000614285 MRS2Q9HD23 443 aa22.09■■□□□ 1.13
CACNA1A-214ENST00000614285 PATL2C9JE40 543 aaKnown RBP22.08■■□□□ 1.13
CACNA1A-214ENST00000614285 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.12
CACNA1A-214ENST00000614285 OS9Q13438 667 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-214ENST00000614285 ARID3CA6NKF2 412 aa22.06■■□□□ 1.12
CACNA1A-214ENST00000614285 ANO8Q9HCE9 1232 aaPredicted RBP22■■□□□ 1.11
CACNA1A-214ENST00000614285 CEP89Q96ST8 783 aa21.99■■□□□ 1.11
CACNA1A-214ENST00000614285 RRP12Q5JTH9 1297 aaKnown RBP21.99■■□□□ 1.11
CACNA1A-214ENST00000614285 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.97■■□□□ 1.11
CACNA1A-214ENST00000614285 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
CACNA1A-214ENST00000614285 MCCP23508 829 aa21.97■■□□□ 1.11
CACNA1A-214ENST00000614285 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
CACNA1A-214ENST00000614285 PTMSP20962 102 aa21.96■■□□□ 1.11
CACNA1A-214ENST00000614285 CFAP44Q96MT7 982 aa21.96■■□□□ 1.11
CACNA1A-214ENST00000614285 HSCBQ8IWL3 235 aa21.93■■□□□ 1.1
CACNA1A-214ENST00000614285 TAF7LQ5H9L4 462 aa21.9■■□□□ 1.1
CACNA1A-214ENST00000614285 MS4A1P11836 297 aa21.89■■□□□ 1.09
CACNA1A-214ENST00000614285 TPM4P67936 248 aa21.89■■□□□ 1.09
CACNA1A-214ENST00000614285 CCDC34Q96HJ3 373 aa21.88■■□□□ 1.09
CACNA1A-214ENST00000614285 NOP58Q9Y2X3 529 aaKnown RBP21.88■■□□□ 1.09
CACNA1A-214ENST00000614285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.09
CACNA1A-214ENST00000614285 EIF4G2P78344 907 aaKnown RBP eCLIP21.87■■□□□ 1.09
CACNA1A-214ENST00000614285 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
CACNA1A-214ENST00000614285 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
CACNA1A-214ENST00000614285 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
CACNA1A-214ENST00000614285 CREBRFQ8IUR6 639 aa21.84■■□□□ 1.09
CACNA1A-214ENST00000614285 SPRYD3Q8NCJ5 442 aa21.83■■□□□ 1.09
CACNA1A-214ENST00000614285 SYAP1Q96A49 352 aaPredicted RBP21.83■■□□□ 1.08
CACNA1A-214ENST00000614285 APPP05067 770 aa21.83■■□□□ 1.08
CACNA1A-214ENST00000614285 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-214ENST00000614285 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
CACNA1A-214ENST00000614285 CDCA8Q53HL2 280 aa21.81■■□□□ 1.08
CACNA1A-214ENST00000614285 RGS3P49796 1198 aa21.81■■□□□ 1.08
CACNA1A-214ENST00000614285 MAPK8IP3Q9UPT6 1336 aa21.77■■□□□ 1.08
CACNA1A-214ENST00000614285 TPM3P06753 285 aa21.75■■□□□ 1.07
CACNA1A-214ENST00000614285 KNSTRNQ9Y448 316 aa21.75■■□□□ 1.07
CACNA1A-214ENST00000614285 WWC1Q8IX03 1113 aa21.74■■□□□ 1.07
CACNA1A-214ENST00000614285 GBP4Q96PP9 640 aa21.72■■□□□ 1.07
CACNA1A-214ENST00000614285 KIAA1211Q6ZU35 1233 aa21.72■■□□□ 1.07
CACNA1A-214ENST00000614285 DEKP35659 375 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-214ENST00000614285 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
CACNA1A-214ENST00000614285 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
CACNA1A-214ENST00000614285 GZF1Q9H116 711 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-214ENST00000614285 CNKSR2Q8WXI2 1034 aa21.7■■□□□ 1.06
CACNA1A-214ENST00000614285 RASSF8Q8NHQ8 419 aa21.68■■□□□ 1.06
CACNA1A-214ENST00000614285 HSP90AA2PQ14568 343 aaPredicted RBP21.68■■□□□ 1.06
CACNA1A-214ENST00000614285 NUDCQ9Y266 331 aa21.68■■□□□ 1.06
CACNA1A-214ENST00000614285 CCDC70Q6NSX1 233 aa21.67■■□□□ 1.06
CACNA1A-214ENST00000614285 HSP90B1P14625 803 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-214ENST00000614285 FRAT1Q92837 279 aaPredicted RBP21.66■■□□□ 1.06
CACNA1A-214ENST00000614285 PES1O00541 588 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-214ENST00000614285 PHF14O94880 888 aa21.66■■□□□ 1.06
CACNA1A-214ENST00000614285 ZNF771Q7L3S4 317 aaPredicted RBP21.65■■□□□ 1.06
CACNA1A-214ENST00000614285 CSPP1Q1MSJ5 1256 aa21.65■■□□□ 1.06
CACNA1A-214ENST00000614285 CCAR2Q8N163 923 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-214ENST00000614285 GPS2Q13227 327 aa21.65■■□□□ 1.06
CACNA1A-214ENST00000614285 TSR1Q2NL82 804 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-214ENST00000614285 MAP7D2Q96T17 732 aa21.64■■□□□ 1.06
CACNA1A-214ENST00000614285 LMOD2Q6P5Q4 547 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 1105.3 ms