RNA–Protein interactions for RNA: ENST00000614176.4

FOXP1-220, Transcript of forkhead box P1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FOXP1, Length 6,384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-220ENST00000614176 WDR97A6NE52 1622 aa13.77□□□□□ -0.2
FOXP1-220ENST00000614176 SYNJ2O15056 1496 aa13.77□□□□□ -0.2
FOXP1-220ENST00000614176 CLIP1P30622 1438 aa13.77□□□□□ -0.21
FOXP1-220ENST00000614176 TNIKQ9UKE5 1360 aa13.76□□□□□ -0.21
FOXP1-220ENST00000614176 SYNJ1O43426 1573 aa13.76□□□□□ -0.21
FOXP1-220ENST00000614176 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
FOXP1-220ENST00000614176 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
FOXP1-220ENST00000614176 BIVM-ERCC5R4GMW8 1640 aa13.71□□□□□ -0.21
FOXP1-220ENST00000614176 PTPRGP23470 1445 aa13.71□□□□□ -0.21
FOXP1-220ENST00000614176 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
FOXP1-220ENST00000614176 ARID3CA6NKF2 412 aa13.69□□□□□ -0.22
FOXP1-220ENST00000614176 CYB5RLQ6IPT4 315 aa13.68□□□□□ -0.22
FOXP1-220ENST00000614176 MTUS2Q5JR59 1369 aa13.68□□□□□ -0.22
FOXP1-220ENST00000614176 CUL7Q14999 1698 aa13.67□□□□□ -0.22
FOXP1-220ENST00000614176 ZNF608Q9ULD9 1512 aaPredicted RBP13.66□□□□□ -0.22
FOXP1-220ENST00000614176 THOC2Q8NI27 1593 aaKnown RBP13.65□□□□□ -0.22
FOXP1-220ENST00000614176 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
FOXP1-220ENST00000614176 KIAA0586Q9BVV6 1533 aa13.64□□□□□ -0.23
FOXP1-220ENST00000614176 GRIN2AQ12879 1464 aa13.64□□□□□ -0.23
FOXP1-220ENST00000614176 KCNH8Q96L42 1107 aa13.63□□□□□ -0.23
FOXP1-220ENST00000614176 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
FOXP1-220ENST00000614176 CEP162Q5TB80 1403 aa13.6□□□□□ -0.23
FOXP1-220ENST00000614176 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
FOXP1-220ENST00000614176 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
FOXP1-220ENST00000614176 CENPBP07199 599 aaPredicted RBP13.59□□□□□ -0.23
FOXP1-220ENST00000614176 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.24
FOXP1-220ENST00000614176 EIF4G3O43432 1585 aaKnown RBP13.57□□□□□ -0.24
FOXP1-220ENST00000614176 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
FOXP1-220ENST00000614176 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
FOXP1-220ENST00000614176 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
FOXP1-220ENST00000614176 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
FOXP1-220ENST00000614176 KIF21BO75037 1637 aa13.52□□□□□ -0.25
FOXP1-220ENST00000614176 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
FOXP1-220ENST00000614176 EFCAB5A4FU69 1503 aa13.5□□□□□ -0.25
FOXP1-220ENST00000614176 ITGAEP38570 1179 aa13.5□□□□□ -0.25
FOXP1-220ENST00000614176 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
FOXP1-220ENST00000614176 CFDP1Q9UEE9 299 aaPredicted RBP13.49□□□□□ -0.25
FOXP1-220ENST00000614176 EFCAB2Q5VUJ9 269 aa13.49□□□□□ -0.25
FOXP1-220ENST00000614176 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
FOXP1-220ENST00000614176 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
FOXP1-220ENST00000614176 TARBP1Q13395 1621 aaKnown RBP13.47□□□□□ -0.25
FOXP1-220ENST00000614176 MYT1Q01538 1121 aa13.47□□□□□ -0.25
FOXP1-220ENST00000614176 FHOD3Q2V2M9 1422 aa13.46□□□□□ -0.25
FOXP1-220ENST00000614176 CCDC18Q5T9S5 1454 aa13.45□□□□□ -0.26
FOXP1-220ENST00000614176 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
FOXP1-220ENST00000614176 VPS8Q8N3P4 1428 aa13.43□□□□□ -0.26
FOXP1-220ENST00000614176 UACAQ9BZF9 1416 aa13.43□□□□□ -0.26
FOXP1-220ENST00000614176 NUP160Q12769 1436 aa13.43□□□□□ -0.26
FOXP1-220ENST00000614176 FAM69CQ0P6D2 419 aa13.42□□□□□ -0.26
FOXP1-220ENST00000614176 RSPH4AQ5TD94 716 aa13.41□□□□□ -0.26
FOXP1-220ENST00000614176 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
FOXP1-220ENST00000614176 PBRM1Q86U86 1689 aa13.4□□□□□ -0.26
FOXP1-220ENST00000614176 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
FOXP1-220ENST00000614176 TRIM52Q96A61 297 aa13.38□□□□□ -0.27
FOXP1-220ENST00000614176 AEBP2Q6ZN18 517 aaPredicted RBP13.34□□□□□ -0.27
FOXP1-220ENST00000614176 PLB1Q6P1J6 1458 aa13.33□□□□□ -0.28
FOXP1-220ENST00000614176 CASKIN1Q8WXD9 1431 aa13.32□□□□□ -0.28
FOXP1-220ENST00000614176 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
FOXP1-220ENST00000614176 UGGT2Q9NYU1 1516 aa13.3□□□□□ -0.28
FOXP1-220ENST00000614176 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
FOXP1-220ENST00000614176 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
FOXP1-220ENST00000614176 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
FOXP1-220ENST00000614176 HECW1Q76N89 1606 aa13.29□□□□□ -0.28
FOXP1-220ENST00000614176 STAG3Q9UJ98 1225 aa13.28□□□□□ -0.28
FOXP1-220ENST00000614176 KANK1Q14678 1352 aa13.26□□□□□ -0.29
FOXP1-220ENST00000614176 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
FOXP1-220ENST00000614176 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
FOXP1-220ENST00000614176 SPAG9O60271 1321 aaKnown RBP13.23□□□□□ -0.29
FOXP1-220ENST00000614176 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
FOXP1-220ENST00000614176 TEX14Q8IWB6 1497 aa13.22□□□□□ -0.29
FOXP1-220ENST00000614176 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
FOXP1-220ENST00000614176 CHD1O14646 1710 aa13.21□□□□□ -0.29
FOXP1-220ENST00000614176 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.3
FOXP1-220ENST00000614176 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
FOXP1-220ENST00000614176 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
FOXP1-220ENST00000614176 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
FOXP1-220ENST00000614176 BCANQ96GW7 911 aa13.19□□□□□ -0.3
FOXP1-220ENST00000614176 KIAA0556O60303 1618 aa13.19□□□□□ -0.3
FOXP1-220ENST00000614176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■■■□□ 16.4
FOXP1-220ENST00000614176 ANKRD30AQ9BXX3 1397 aa13.18□□□□□ -0.3
FOXP1-220ENST00000614176 CD109Q6YHK3 1445 aa13.17□□□□□ -0.3
FOXP1-220ENST00000614176 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
FOXP1-220ENST00000614176 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
FOXP1-220ENST00000614176 PLPPR3Q6T4P5 718 aa13.15□□□□□ -0.3
FOXP1-220ENST00000614176 EHBP1L1Q8N3D4 1523 aa13.15□□□□□ -0.3
FOXP1-220ENST00000614176 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
FOXP1-220ENST00000614176 POGZQ7Z3K3 1410 aa13.15□□□□□ -0.31
FOXP1-220ENST00000614176 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
FOXP1-220ENST00000614176 EPRSP07814 1512 aaKnown RBP13.14□□□□□ -0.31
FOXP1-220ENST00000614176 ASXL2Q76L83 1435 aa13.13□□□□□ -0.31
FOXP1-220ENST00000614176 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
FOXP1-220ENST00000614176 UHRF1BP1LA0JNW5 1464 aa13.13□□□□□ -0.31
FOXP1-220ENST00000614176 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
FOXP1-220ENST00000614176 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
FOXP1-220ENST00000614176 WDR7Q9Y4E6 1490 aa13.12□□□□□ -0.31
FOXP1-220ENST00000614176 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
FOXP1-220ENST00000614176 RAPGEF6Q8TEU7 1601 aa13.11□□□□□ -0.31
FOXP1-220ENST00000614176 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
FOXP1-220ENST00000614176 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
FOXP1-220ENST00000614176 MLECQ14165 292 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms