RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
TNFAIP3-206ENST00000612899 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.29
TNFAIP3-206ENST00000612899 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
TNFAIP3-206ENST00000612899 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.293e-7■■■■■ 30.4
TNFAIP3-206ENST00000612899 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
TNFAIP3-206ENST00000612899 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
TNFAIP3-206ENST00000612899 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
TNFAIP3-206ENST00000612899 IRX6P78412 446 aaPredicted RBP16.83■□□□□ 0.28
TNFAIP3-206ENST00000612899 CCDC136Q96JN2 1154 aa16.83■□□□□ 0.28
TNFAIP3-206ENST00000612899 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
TNFAIP3-206ENST00000612899 EIF5BO60841 1220 aaKnown RBP16.82■□□□□ 0.28
TNFAIP3-206ENST00000612899 RGL3Q3MIN7 710 aa16.81■□□□□ 0.28
TNFAIP3-206ENST00000612899 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
TNFAIP3-206ENST00000612899 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
TNFAIP3-206ENST00000612899 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
TNFAIP3-206ENST00000612899 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
TNFAIP3-206ENST00000612899 SIN3AQ96ST3 1273 aa16.76■□□□□ 0.27
TNFAIP3-206ENST00000612899 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
TNFAIP3-206ENST00000612899 SOGA1O94964 1423 aa16.75■□□□□ 0.27
TNFAIP3-206ENST00000612899 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP3-206ENST00000612899 HSP90AA1P07900 732 aaKnown RBP16.69■□□□□ 0.26
TNFAIP3-206ENST00000612899 UPF2Q9HAU5 1272 aaKnown RBP16.69■□□□□ 0.26
TNFAIP3-206ENST00000612899 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.26
TNFAIP3-206ENST00000612899 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
TNFAIP3-206ENST00000612899 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
TNFAIP3-206ENST00000612899 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
TNFAIP3-206ENST00000612899 CUX2O14529 1486 aa16.62■□□□□ 0.25
TNFAIP3-206ENST00000612899 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
TNFAIP3-206ENST00000612899 NBR1Q14596 966 aa16.59■□□□□ 0.25
TNFAIP3-206ENST00000612899 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
TNFAIP3-206ENST00000612899 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
TNFAIP3-206ENST00000612899 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
TNFAIP3-206ENST00000612899 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
TNFAIP3-206ENST00000612899 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
TNFAIP3-206ENST00000612899 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
TNFAIP3-206ENST00000612899 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
TNFAIP3-206ENST00000612899 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
TNFAIP3-206ENST00000612899 PRKCSHP14314 528 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP3-206ENST00000612899 CDCA8Q53HL2 280 aa16.51■□□□□ 0.23
TNFAIP3-206ENST00000612899 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
TNFAIP3-206ENST00000612899 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
TNFAIP3-206ENST00000612899 PPM1GO15355 546 aaPredicted RBP16.49■□□□□ 0.23
TNFAIP3-206ENST00000612899 ZBTB7CA1YPR0 619 aa16.48■□□□□ 0.23
TNFAIP3-206ENST00000612899 NEUROD2Q15784 382 aa16.48■□□□□ 0.23
TNFAIP3-206ENST00000612899 ANP32BQ92688 251 aaKnown RBP16.48■□□□□ 0.23
TNFAIP3-206ENST00000612899 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
TNFAIP3-206ENST00000612899 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
TNFAIP3-206ENST00000612899 ARXQ96QS3 562 aa16.47■□□□□ 0.23
TNFAIP3-206ENST00000612899 CFAP53Q96M91 514 aa16.46■□□□□ 0.23
TNFAIP3-206ENST00000612899 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
TNFAIP3-206ENST00000612899 MYH16Q9H6N6 1097 aa16.44■□□□□ 0.22
TNFAIP3-206ENST00000612899 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
TNFAIP3-206ENST00000612899 TNNT2P45379 298 aaPredicted RBP16.43■□□□□ 0.22
TNFAIP3-206ENST00000612899 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
TNFAIP3-206ENST00000612899 FOXD1Q16676 465 aa16.42■□□□□ 0.22
TNFAIP3-206ENST00000612899 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
TNFAIP3-206ENST00000612899 TIMELESSQ9UNS1 1208 aa16.41■□□□□ 0.22
TNFAIP3-206ENST00000612899 A0A0G2JS52 829 aa16.4■□□□□ 0.22
TNFAIP3-206ENST00000612899 POGKQ9P215 609 aa16.39■□□□□ 0.21
TNFAIP3-206ENST00000612899 PKD2Q13563 968 aa16.37■□□□□ 0.21
TNFAIP3-206ENST00000612899 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
TNFAIP3-206ENST00000612899 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
TNFAIP3-206ENST00000612899 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
TNFAIP3-206ENST00000612899 WIZO95785 1651 aa16.34■□□□□ 0.21
TNFAIP3-206ENST00000612899 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
TNFAIP3-206ENST00000612899 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
TNFAIP3-206ENST00000612899 TMF1P82094 1093 aa16.33■□□□□ 0.21
TNFAIP3-206ENST00000612899 PPP4R2Q9NY27 417 aa16.33■□□□□ 0.21
TNFAIP3-206ENST00000612899 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.2
TNFAIP3-206ENST00000612899 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.2
TNFAIP3-206ENST00000612899 B4GALNT3Q6L9W6 998 aa16.32■□□□□ 0.2
TNFAIP3-206ENST00000612899 FRAT1Q92837 279 aaPredicted RBP16.32■□□□□ 0.2
TNFAIP3-206ENST00000612899 NUDCQ9Y266 331 aa16.32■□□□□ 0.2
TNFAIP3-206ENST00000612899 U2SURPO15042 1029 aaKnown RBP16.3■□□□□ 0.2
TNFAIP3-206ENST00000612899 RGS3P49796 1198 aa16.3■□□□□ 0.2
TNFAIP3-206ENST00000612899 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
TNFAIP3-206ENST00000612899 MPHOSPH9Q99550 1183 aa16.29■□□□□ 0.2
TNFAIP3-206ENST00000612899 GGT6Q6P531 493 aa16.29■□□□□ 0.2
TNFAIP3-206ENST00000612899 MLECQ14165 292 aa16.29■□□□□ 0.2
TNFAIP3-206ENST00000612899 BECN1Q14457 450 aa16.28■□□□□ 0.2
TNFAIP3-206ENST00000612899 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
TNFAIP3-206ENST00000612899 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.2
TNFAIP3-206ENST00000612899 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.2
TNFAIP3-206ENST00000612899 CCER2I3L3R5 266 aa16.27■□□□□ 0.19
TNFAIP3-206ENST00000612899 FMN1Q68DA7 1419 aa16.27■□□□□ 0.19
TNFAIP3-206ENST00000612899 TOP2AP11388 1531 aaKnown RBP16.27■□□□□ 0.19
TNFAIP3-206ENST00000612899 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
TNFAIP3-206ENST00000612899 KANK1Q14678 1352 aa16.25■□□□□ 0.19
TNFAIP3-206ENST00000612899 CARMIL2Q6F5E8 1435 aa16.24■□□□□ 0.19
TNFAIP3-206ENST00000612899 NUP155O75694 1391 aa16.24■□□□□ 0.19
TNFAIP3-206ENST00000612899 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
TNFAIP3-206ENST00000612899 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
TNFAIP3-206ENST00000612899 HAP1P54257 671 aaPredicted RBP16.23■□□□□ 0.19
TNFAIP3-206ENST00000612899 SRPK2P78362 688 aaKnown RBP16.23■□□□□ 0.19
TNFAIP3-206ENST00000612899 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
TNFAIP3-206ENST00000612899 ERICH6BQ5W0A0 696 aa16.21■□□□□ 0.18
TNFAIP3-206ENST00000612899 SOX12O15370 315 aa16.2■□□□□ 0.18
TNFAIP3-206ENST00000612899 L3MBTL2Q969R5 705 aa16.2■□□□□ 0.18
TNFAIP3-206ENST00000612899 EFCAB2Q5VUJ9 269 aa16.19■□□□□ 0.18
TNFAIP3-206ENST00000612899 MORC1Q86VD1 984 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms