RNA–Protein interactions for RNA: ENST00000611967.4

PCSK6-215, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best) BASIC

Gene PCSK6, Length 3,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-215ENST00000611967 RAD54L2Q9Y4B4 1467 aa30.79■■■□□ 2.52
PCSK6-215ENST00000611967 ANP32CO43423 234 aa30.79■■■□□ 2.52
PCSK6-215ENST00000611967 CUX2O14529 1486 aa30.75■■■□□ 2.51
PCSK6-215ENST00000611967 FAM50AQ14320 339 aaKnown RBP30.75■■■□□ 2.51
PCSK6-215ENST00000611967 TDRD9Q8NDG6 1382 aaKnown RBP30.73■■■□□ 2.51
PCSK6-215ENST00000611967 MSH5O43196 834 aa30.7■■■□□ 2.51
PCSK6-215ENST00000611967 FGD5Q6ZNL6 1462 aa30.69■■■□□ 2.5
PCSK6-215ENST00000611967 CDK11AQ9UQ88 783 aaPredicted RBP30.68■■■□□ 2.5
PCSK6-215ENST00000611967 KIF21BO75037 1637 aa30.67■■■□□ 2.5
PCSK6-215ENST00000611967 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
PCSK6-215ENST00000611967 HNRNPUQ00839 825 aaKnown RBP eCLIP30.61■■■□□ 2.49
PCSK6-215ENST00000611967 FBLN2P98095 1184 aa30.6■■■□□ 2.49
PCSK6-215ENST00000611967 ERCC6Q03468 1493 aa30.59■■■□□ 2.49
PCSK6-215ENST00000611967 CCNB3Q8WWL7 1395 aa30.59■■■□□ 2.49
PCSK6-215ENST00000611967 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
PCSK6-215ENST00000611967 KIF27Q86VH2 1401 aa30.58■■■□□ 2.49
PCSK6-215ENST00000611967 RAB3GAP2Q9H2M9 1393 aa30.58■■■□□ 2.49
PCSK6-215ENST00000611967 TOPBP1Q92547 1522 aa30.48■■■□□ 2.47
PCSK6-215ENST00000611967 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
PCSK6-215ENST00000611967 NBR1Q14596 966 aa30.45■■■□□ 2.46
PCSK6-215ENST00000611967 ARID3CA6NKF2 412 aa30.44■■■□□ 2.46
PCSK6-215ENST00000611967 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
PCSK6-215ENST00000611967 PPP1R15AO75807 674 aaPredicted RBP30.43■■■□□ 2.46
PCSK6-215ENST00000611967 CNGB1Q14028 1251 aaPredicted RBP30.42■■■□□ 2.46
PCSK6-215ENST00000611967 IGF1RP08069 1367 aa30.39■■■□□ 2.46
PCSK6-215ENST00000611967 KIF21AQ7Z4S6 1674 aa30.38■■■□□ 2.45
PCSK6-215ENST00000611967 CARMIL1Q5VZK9 1371 aa30.37■■■□□ 2.45
PCSK6-215ENST00000611967 BIVM-ERCC5R4GMW8 1640 aa30.35■■■□□ 2.45
PCSK6-215ENST00000611967 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
PCSK6-215ENST00000611967 CCER2I3L3R5 266 aa30.34■■■□□ 2.45
PCSK6-215ENST00000611967 AQRO60306 1485 aaKnown RBP eCLIP30.34■■■□□ 2.456e-7■■□□□ 11.9
PCSK6-215ENST00000611967 ARAP1Q96P48 1450 aa30.34■■■□□ 2.45
PCSK6-215ENST00000611967 DEKP35659 375 aaKnown RBP30.33■■■□□ 2.45
PCSK6-215ENST00000611967 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
PCSK6-215ENST00000611967 RRBP1Q9P2E9 1410 aaKnown RBP30.3■■■□□ 2.44
PCSK6-215ENST00000611967 B4GALNT3Q6L9W6 998 aa30.29■■■□□ 2.44
PCSK6-215ENST00000611967 SETD5Q9C0A6 1442 aa30.26■■■□□ 2.43
PCSK6-215ENST00000611967 FAM9BQ8IZU0 186 aa30.23■■■□□ 2.43
PCSK6-215ENST00000611967 FANCIQ9NVI1 1328 aa30.23■■■□□ 2.43
PCSK6-215ENST00000611967 TONSLQ96HA7 1378 aa30.22■■■□□ 2.43
PCSK6-215ENST00000611967 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
PCSK6-215ENST00000611967 SENP3-EIF4A1A0A087X0R7 540 aa30.17■■■□□ 2.42
PCSK6-215ENST00000611967 MAPKBP1O60336 1514 aa30.16■■■□□ 2.42
PCSK6-215ENST00000611967 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
PCSK6-215ENST00000611967 ZNF608Q9ULD9 1512 aaPredicted RBP30.13■■■□□ 2.41
PCSK6-215ENST00000611967 PRXQ9BXM0 1461 aa30.12■■■□□ 2.41
PCSK6-215ENST00000611967 PPP4R2Q9NY27 417 aa30.09■■■□□ 2.41
PCSK6-215ENST00000611967 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
PCSK6-215ENST00000611967 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
PCSK6-215ENST00000611967 CHMP7Q8WUX9 453 aaPredicted RBP30.03■■■□□ 2.4
PCSK6-215ENST00000611967 PHLDB1Q86UU1 1377 aa30■■■□□ 2.39
PCSK6-215ENST00000611967 NOP58Q9Y2X3 529 aaKnown RBP30■■■□□ 2.39
PCSK6-215ENST00000611967 RTL5Q5HYW3 569 aaPredicted RBP29.99■■■□□ 2.39
PCSK6-215ENST00000611967 POLR3GLQ9BT43 218 aa29.99■■■□□ 2.39
PCSK6-215ENST00000611967 PAK3O75914 559 aaPredicted RBP29.97■■■□□ 2.39
PCSK6-215ENST00000611967 CCDC184Q52MB2 194 aa29.97■■■□□ 2.39
PCSK6-215ENST00000611967 ABCA10Q8WWZ4 1543 aa29.97■■■□□ 2.39
PCSK6-215ENST00000611967 ARHGAP35Q9NRY4 1499 aa29.97■■■□□ 2.39
PCSK6-215ENST00000611967 MRS2Q9HD23 443 aa29.96■■■□□ 2.39
PCSK6-215ENST00000611967 PRKCSHP14314 528 aaPredicted RBP29.96■■■□□ 2.39
PCSK6-215ENST00000611967 RTN4Q9NQC3 1192 aaKnown RBP29.95■■■□□ 2.38
PCSK6-215ENST00000611967 TIMELESSQ9UNS1 1208 aa29.93■■■□□ 2.38
PCSK6-215ENST00000611967 MYT1LQ9UL68 1186 aa29.93■■■□□ 2.38
PCSK6-215ENST00000611967 FHOD3Q2V2M9 1422 aa29.91■■■□□ 2.38
PCSK6-215ENST00000611967 NPM2Q86SE8 214 aaKnown RBP29.89■■■□□ 2.38
PCSK6-215ENST00000611967 ANO8Q9HCE9 1232 aaPredicted RBP29.88■■■□□ 2.37
PCSK6-215ENST00000611967 HSPA5P11021 654 aaKnown RBP29.86■■■□□ 2.37
PCSK6-215ENST00000611967 ANP32AP39687 249 aaKnown RBP29.85■■■□□ 2.37
PCSK6-215ENST00000611967 ERICH3Q5RHP9 1530 aa29.83■■■□□ 2.37
PCSK6-215ENST00000611967 CHIC2Q9UKJ5 165 aa29.82■■■□□ 2.36
PCSK6-215ENST00000611967 CCDC136Q96JN2 1154 aa29.81■■■□□ 2.36
PCSK6-215ENST00000611967 ZBTB47Q9UFB7 747 aaPredicted RBP29.79■■■□□ 2.36
PCSK6-215ENST00000611967 WASHC2AQ641Q2 1341 aa29.76■■■□□ 2.35
PCSK6-215ENST00000611967 RRP7BPQ9NSQ0 103 aa29.75■■■□□ 2.35
PCSK6-215ENST00000611967 EIF4G2P78344 907 aaKnown RBP eCLIP29.73■■■□□ 2.35
PCSK6-215ENST00000611967 LRRC9Q6ZRR7 1453 aa29.73■■■□□ 2.35
PCSK6-215ENST00000611967 SNAPC4Q5SXM2 1469 aa29.7■■■□□ 2.34
PCSK6-215ENST00000611967 ERICH6BQ5W0A0 696 aa29.67■■■□□ 2.34
PCSK6-215ENST00000611967 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
PCSK6-215ENST00000611967 SALL2Q9Y467 1007 aaPredicted RBP29.66■■■□□ 2.34
PCSK6-215ENST00000611967 LAS1LQ9Y4W2 734 aaKnown RBP29.66■■■□□ 2.34
PCSK6-215ENST00000611967 FOXD1Q16676 465 aa29.65■■■□□ 2.34
PCSK6-215ENST00000611967 TIAM1Q13009 1591 aa29.65■■■□□ 2.34
PCSK6-215ENST00000611967 IFT140Q96RY7 1462 aa29.64■■■□□ 2.34
PCSK6-215ENST00000611967 IL27Q8NEV9 243 aa29.63■■■□□ 2.33
PCSK6-215ENST00000611967 GRIN2BQ13224 1484 aa29.62■■■□□ 2.33
PCSK6-215ENST00000611967 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.61■■■□□ 2.33
PCSK6-215ENST00000611967 PRKRIP1Q9H875 184 aaPredicted RBP29.61■■■□□ 2.33
PCSK6-215ENST00000611967 WDR62O43379 1518 aa29.59■■■□□ 2.33
PCSK6-215ENST00000611967 IPO9Q96P70 1041 aaKnown RBP29.59■■■□□ 2.33
PCSK6-215ENST00000611967 ZNF326Q5BKZ1 582 aaKnown RBP29.58■■■□□ 2.33
PCSK6-215ENST00000611967 C11orf95C9JLR9 678 aaPredicted RBP29.55■■■□□ 2.32
PCSK6-215ENST00000611967 MTUS2Q5JR59 1369 aa29.55■■■□□ 2.32
PCSK6-215ENST00000611967 ABCA5Q8WWZ7 1642 aa29.55■■■□□ 2.32
PCSK6-215ENST00000611967 CCDC18Q5T9S5 1454 aa29.54■■■□□ 2.32
PCSK6-215ENST00000611967 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
PCSK6-215ENST00000611967 THOC2Q8NI27 1593 aaKnown RBP29.51■■■□□ 2.31
PCSK6-215ENST00000611967 ZBED9Q6R2W3 1325 aa29.51■■■□□ 2.31
PCSK6-215ENST00000611967 AKNAQ7Z591 1439 aa29.51■■■□□ 2.31
PCSK6-215ENST00000611967 EIF4G3O43432 1585 aaKnown RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms