RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, humanhuman

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-208ENST00000611841 SIN3AQ96ST3 1273 aa16.46■□□□□ 0.23
EP400-208ENST00000611841 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
EP400-208ENST00000611841 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
EP400-208ENST00000611841 BCANQ96GW7 911 aa16.44■□□□□ 0.22
EP400-208ENST00000611841 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
EP400-208ENST00000611841 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
EP400-208ENST00000611841 HIRIP3Q9BW71 556 aaPredicted RBP16.4■□□□□ 0.22
EP400-208ENST00000611841 FHOD3Q2V2M9 1422 aa16.38■□□□□ 0.21
EP400-208ENST00000611841 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
EP400-208ENST00000611841 NESP48681 1621 aa16.36■□□□□ 0.21
EP400-208ENST00000611841 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
EP400-208ENST00000611841 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
EP400-208ENST00000611841 FHAD1B1AJZ9 1412 aa16.34■□□□□ 0.21
EP400-208ENST00000611841 SETD5Q9C0A6 1442 aa16.34■□□□□ 0.21
EP400-208ENST00000611841 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
EP400-208ENST00000611841 ARID3CA6NKF2 412 aa16.34■□□□□ 0.21
EP400-208ENST00000611841 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
EP400-208ENST00000611841 LRRC9Q6ZRR7 1453 aa16.32■□□□□ 0.2
EP400-208ENST00000611841 KCNH8Q96L42 1107 aa16.31■□□□□ 0.2
EP400-208ENST00000611841 MTUS2Q5JR59 1369 aa16.28■□□□□ 0.2
EP400-208ENST00000611841 TIAM1Q13009 1591 aa16.27■□□□□ 0.2
EP400-208ENST00000611841 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
EP400-208ENST00000611841 CHIC2Q9UKJ5 165 aa16.24■□□□□ 0.19
EP400-208ENST00000611841 RBM19Q9Y4C8 960 aaKnown RBP16.24■□□□□ 0.19
EP400-208ENST00000611841 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
EP400-208ENST00000611841 FKBP8Q14318 412 aa16.2■□□□□ 0.18
EP400-208ENST00000611841 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
EP400-208ENST00000611841 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
EP400-208ENST00000611841 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
EP400-208ENST00000611841 PPP1R15AO75807 674 aaPredicted RBP16.17■□□□□ 0.18
EP400-208ENST00000611841 ABCA10Q8WWZ4 1543 aa16.17■□□□□ 0.18
EP400-208ENST00000611841 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
EP400-208ENST00000611841 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
EP400-208ENST00000611841 MAPKBP1O60336 1514 aa16.16■□□□□ 0.18
EP400-208ENST00000611841 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
EP400-208ENST00000611841 DNMBPQ6XZF7 1577 aa16.15■□□□□ 0.18
EP400-208ENST00000611841 ERICH6Q7L0X2 663 aa16.15■□□□□ 0.18
EP400-208ENST00000611841 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
EP400-208ENST00000611841 CASKIN1Q8WXD9 1431 aa16.15■□□□□ 0.18
EP400-208ENST00000611841 ANP32CO43423 234 aa16.12■□□□□ 0.17
EP400-208ENST00000611841 MSH5O43196 834 aa16.12■□□□□ 0.17
EP400-208ENST00000611841 WDR97A6NE52 1622 aa16.11■□□□□ 0.17
EP400-208ENST00000611841 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
EP400-208ENST00000611841 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
EP400-208ENST00000611841 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
EP400-208ENST00000611841 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
EP400-208ENST00000611841 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
EP400-208ENST00000611841 FGD6Q6ZV73 1430 aa16.1■□□□□ 0.17
EP400-208ENST00000611841 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
EP400-208ENST00000611841 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
EP400-208ENST00000611841 PTPRKQ15262 1439 aa16.04■□□□□ 0.16
EP400-208ENST00000611841 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
EP400-208ENST00000611841 FOXD1Q16676 465 aa16.03■□□□□ 0.16
EP400-208ENST00000611841 CCDC18Q5T9S5 1454 aa16.02■□□□□ 0.15
EP400-208ENST00000611841 FBLN2P98095 1184 aa16.02■□□□□ 0.15
EP400-208ENST00000611841 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.152e-7■■■■□ 21.4
EP400-208ENST00000611841 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
EP400-208ENST00000611841 NEFLP07196 543 aa16.01■□□□□ 0.15
EP400-208ENST00000611841 CNGB1Q14028 1251 aaPredicted RBP15.99■□□□□ 0.15
EP400-208ENST00000611841 MYOM3Q5VTT5 1437 aa15.98■□□□□ 0.15
EP400-208ENST00000611841 DEKP35659 375 aaKnown RBP15.98■□□□□ 0.15
EP400-208ENST00000611841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.98■□□□□ 0.15
EP400-208ENST00000611841 CUL7Q14999 1698 aa15.97■□□□□ 0.15
EP400-208ENST00000611841 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.15
EP400-208ENST00000611841 CFAP43Q8NDM7 1665 aa15.96■□□□□ 0.15
EP400-208ENST00000611841 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
EP400-208ENST00000611841 ZNF777Q9ULD5 760 aaPredicted RBP15.95■□□□□ 0.14
EP400-208ENST00000611841 LAMC3Q9Y6N6 1575 aa15.95■□□□□ 0.14
EP400-208ENST00000611841 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
EP400-208ENST00000611841 NAIPQ13075 1403 aa15.95■□□□□ 0.14
EP400-208ENST00000611841 MPHOSPH9Q99550 1183 aa15.93■□□□□ 0.14
EP400-208ENST00000611841 HSPA5P11021 654 aaKnown RBP15.92■□□□□ 0.14
EP400-208ENST00000611841 ZNF644Q9H582 1327 aaPredicted RBP15.91■□□□□ 0.14
EP400-208ENST00000611841 POLR3GLQ9BT43 218 aa15.91■□□□□ 0.14
EP400-208ENST00000611841 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
EP400-208ENST00000611841 CCER2I3L3R5 266 aa15.9■□□□□ 0.14
EP400-208ENST00000611841 CCDC136Q96JN2 1154 aa15.9■□□□□ 0.14
EP400-208ENST00000611841 L3MBTL2Q969R5 705 aa15.9■□□□□ 0.14
EP400-208ENST00000611841 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
EP400-208ENST00000611841 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
EP400-208ENST00000611841 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
EP400-208ENST00000611841 ZNF326Q5BKZ1 582 aaKnown RBP15.89■□□□□ 0.13
EP400-208ENST00000611841 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
EP400-208ENST00000611841 SALL2Q9Y467 1007 aaPredicted RBP15.89■□□□□ 0.13
EP400-208ENST00000611841 CDK11AQ9UQ88 783 aaPredicted RBP15.88■□□□□ 0.13
EP400-208ENST00000611841 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
EP400-208ENST00000611841 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
EP400-208ENST00000611841 CDK13Q14004 1512 aaKnown RBP15.84■□□□□ 0.13
EP400-208ENST00000611841 NBR1Q14596 966 aa15.84■□□□□ 0.13
EP400-208ENST00000611841 PTPN23Q9H3S7 1636 aa15.84■□□□□ 0.13
EP400-208ENST00000611841 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
EP400-208ENST00000611841 CFDP1Q9UEE9 299 aaPredicted RBP15.83■□□□□ 0.12
EP400-208ENST00000611841 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
EP400-208ENST00000611841 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
EP400-208ENST00000611841 MAGI3Q5TCQ9 1506 aa15.82■□□□□ 0.12
EP400-208ENST00000611841 EHBP1L1Q8N3D4 1523 aa15.82■□□□□ 0.12
EP400-208ENST00000611841 EPRSP07814 1512 aaKnown RBP15.81■□□□□ 0.12
EP400-208ENST00000611841 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
EP400-208ENST00000611841 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
EP400-208ENST00000611841 FANCIQ9NVI1 1328 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms