RNA–Protein interactions for RNA: ENST00000611716.4

PCSK6-214, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCSK6, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-214ENST00000611716 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
PCSK6-214ENST00000611716 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
PCSK6-214ENST00000611716 ABCC8Q09428 1581 aa26.73■■□□□ 1.87
PCSK6-214ENST00000611716 ARXQ96QS3 562 aa26.73■■□□□ 1.87
PCSK6-214ENST00000611716 CHIC2Q9UKJ5 165 aa26.72■■□□□ 1.87
PCSK6-214ENST00000611716 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.71■■□□□ 1.87
PCSK6-214ENST00000611716 WRNQ14191 1432 aaPredicted RBP eCLIP26.7■■□□□ 1.86
PCSK6-214ENST00000611716 CCER2I3L3R5 266 aa26.69■■□□□ 1.86
PCSK6-214ENST00000611716 NEFMP07197 916 aa26.69■■□□□ 1.86
PCSK6-214ENST00000611716 CEP164Q9UPV0 1460 aa26.67■■□□□ 1.86
PCSK6-214ENST00000611716 TMC1Q8TDI8 760 aa26.66■■□□□ 1.86
PCSK6-214ENST00000611716 EIF4G2P78344 907 aaKnown RBP eCLIP26.64■■□□□ 1.86
PCSK6-214ENST00000611716 DHX57Q6P158 1386 aaKnown RBP26.63■■□□□ 1.85
PCSK6-214ENST00000611716 VPS8Q8N3P4 1428 aa26.62■■□□□ 1.85
PCSK6-214ENST00000611716 CCNB3Q8WWL7 1395 aa26.6■■□□□ 1.85
PCSK6-214ENST00000611716 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
PCSK6-214ENST00000611716 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
PCSK6-214ENST00000611716 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
PCSK6-214ENST00000611716 RUSC2Q8N2Y8 1516 aa26.5■■□□□ 1.83
PCSK6-214ENST00000611716 RRP7BPQ9NSQ0 103 aa26.5■■□□□ 1.83
PCSK6-214ENST00000611716 FANCIQ9NVI1 1328 aa26.48■■□□□ 1.83
PCSK6-214ENST00000611716 RAB3GAP2Q9H2M9 1393 aa26.47■■□□□ 1.83
PCSK6-214ENST00000611716 SLC4A1APQ9BWU0 796 aaKnown RBP26.45■■□□□ 1.82
PCSK6-214ENST00000611716 GLIPR1L2Q4G1C9 344 aa26.42■■□□□ 1.82
PCSK6-214ENST00000611716 PPM1GO15355 546 aaPredicted RBP26.42■■□□□ 1.82
PCSK6-214ENST00000611716 CANXP27824 592 aaKnown RBP26.41■■□□□ 1.82
PCSK6-214ENST00000611716 ANO8Q9HCE9 1232 aaPredicted RBP26.38■■□□□ 1.81
PCSK6-214ENST00000611716 ZNF777Q9ULD5 760 aaPredicted RBP26.38■■□□□ 1.81
PCSK6-214ENST00000611716 MSH5O43196 834 aa26.38■■□□□ 1.81
PCSK6-214ENST00000611716 PPP1R15AO75807 674 aaPredicted RBP26.38■■□□□ 1.81
PCSK6-214ENST00000611716 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
PCSK6-214ENST00000611716 NPM1P06748 294 aaKnown RBP eCLIP26.37■■□□□ 1.81
PCSK6-214ENST00000611716 IPO9Q96P70 1041 aaKnown RBP26.35■■□□□ 1.81
PCSK6-214ENST00000611716 PRKCSHP14314 528 aaPredicted RBP26.34■■□□□ 1.81
PCSK6-214ENST00000611716 SETD5Q9C0A6 1442 aa26.32■■□□□ 1.8
PCSK6-214ENST00000611716 HSPA5P11021 654 aaKnown RBP26.31■■□□□ 1.8
PCSK6-214ENST00000611716 ERICH6BQ5W0A0 696 aa26.31■■□□□ 1.8
PCSK6-214ENST00000611716 DDRGK1Q96HY6 314 aa26.3■■□□□ 1.8
PCSK6-214ENST00000611716 MTUS2Q5JR59 1369 aa26.29■■□□□ 1.8
PCSK6-214ENST00000611716 TIMELESSQ9UNS1 1208 aa26.29■■□□□ 1.8
PCSK6-214ENST00000611716 WIZO95785 1651 aa26.28■■□□□ 1.8
PCSK6-214ENST00000611716 KDM2AQ9Y2K7 1162 aa26.26■■□□□ 1.79
PCSK6-214ENST00000611716 KIF27Q86VH2 1401 aa26.24■■□□□ 1.79
PCSK6-214ENST00000611716 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
PCSK6-214ENST00000611716 PAK3O75914 559 aaPredicted RBP26.17■■□□□ 1.78
PCSK6-214ENST00000611716 RGS3P49796 1198 aa26.17■■□□□ 1.78
PCSK6-214ENST00000611716 RAPGEF2Q9Y4G8 1499 aa26.15■■□□□ 1.78
PCSK6-214ENST00000611716 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.78
PCSK6-214ENST00000611716 UPF2Q9HAU5 1272 aaKnown RBP26.14■■□□□ 1.77
PCSK6-214ENST00000611716 IL27Q8NEV9 243 aa26.13■■□□□ 1.77
PCSK6-214ENST00000611716 NAP1L5Q96NT1 182 aaPredicted RBP26.11■■□□□ 1.77
PCSK6-214ENST00000611716 FOXD1Q16676 465 aa26.08■■□□□ 1.77
PCSK6-214ENST00000611716 CADPSQ9ULU8 1353 aa26.06■■□□□ 1.76
PCSK6-214ENST00000611716 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.03■■□□□ 1.76
PCSK6-214ENST00000611716 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
PCSK6-214ENST00000611716 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
PCSK6-214ENST00000611716 HSP90AA1P07900 732 aaKnown RBP26.02■■□□□ 1.76
PCSK6-214ENST00000611716 SLC4A3P48751 1232 aa26.02■■□□□ 1.76
PCSK6-214ENST00000611716 CUX2O14529 1486 aa26.02■■□□□ 1.76
PCSK6-214ENST00000611716 NUDCQ9Y266 331 aa26■■□□□ 1.75
PCSK6-214ENST00000611716 WDR43Q15061 677 aaKnown RBP eCLIP25.98■■□□□ 1.75
PCSK6-214ENST00000611716 TCERG1O14776 1098 aaKnown RBP25.97■■□□□ 1.75
PCSK6-214ENST00000611716 ANP32BQ92688 251 aaKnown RBP25.96■■□□□ 1.75
PCSK6-214ENST00000611716 BECN1Q14457 450 aa25.95■■□□□ 1.74
PCSK6-214ENST00000611716 PRKRIP1Q9H875 184 aaPredicted RBP25.94■■□□□ 1.74
PCSK6-214ENST00000611716 ARID4BQ4LE39 1312 aaPredicted RBP25.94■■□□□ 1.74
PCSK6-214ENST00000611716 PDE4AP27815 886 aa25.92■■□□□ 1.74
PCSK6-214ENST00000611716 RCAN3Q9UKA8 241 aa25.91■■□□□ 1.74
PCSK6-214ENST00000611716 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
PCSK6-214ENST00000611716 CARD11Q9BXL7 1154 aa25.91■■□□□ 1.74
PCSK6-214ENST00000611716 CARMIL1Q5VZK9 1371 aa25.9■■□□□ 1.74
PCSK6-214ENST00000611716 TRIM44Q96DX7 344 aaPredicted RBP25.88■■□□□ 1.73
PCSK6-214ENST00000611716 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
PCSK6-214ENST00000611716 ZBED9Q6R2W3 1325 aa25.87■■□□□ 1.73
PCSK6-214ENST00000611716 ESF1Q9H501 851 aaKnown RBP25.87■■□□□ 1.73
PCSK6-214ENST00000611716 PLEKHD1A6NEE1 506 aa25.87■■□□□ 1.73
PCSK6-214ENST00000611716 GSE1Q14687 1217 aa25.86■■□□□ 1.73
PCSK6-214ENST00000611716 EXOC6Q8TAG9 804 aa25.86■■□□□ 1.73
PCSK6-214ENST00000611716 USP35Q9P2H5 1018 aa25.85■■□□□ 1.73
PCSK6-214ENST00000611716 SPRYD3Q8NCJ5 442 aa25.84■■□□□ 1.73
PCSK6-214ENST00000611716 CC2D1BQ5T0F9 858 aaKnown RBP25.83■■□□□ 1.73
PCSK6-214ENST00000611716 SLKQ9H2G2 1235 aaPredicted RBP25.83■■□□□ 1.73
PCSK6-214ENST00000611716 RGL3Q3MIN7 710 aa25.83■■□□□ 1.72
PCSK6-214ENST00000611716 BRPF3Q9ULD4 1205 aa25.83■■□□□ 1.72
PCSK6-214ENST00000611716 TSPY4P0CV99 314 aa25.82■■□□□ 1.72
PCSK6-214ENST00000611716 TSPY10P0CW01 314 aa25.82■■□□□ 1.72
PCSK6-214ENST00000611716 CCDC184Q52MB2 194 aa25.81■■□□□ 1.72
PCSK6-214ENST00000611716 GZF1Q9H116 711 aaPredicted RBP25.78■■□□□ 1.72
PCSK6-214ENST00000611716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.78■■□□□ 1.721e-6■□□□□ 11
PCSK6-214ENST00000611716 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
PCSK6-214ENST00000611716 PLIN1O60240 522 aa25.77■■□□□ 1.72
PCSK6-214ENST00000611716 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
PCSK6-214ENST00000611716 ARHGAP35Q9NRY4 1499 aa25.75■■□□□ 1.71
PCSK6-214ENST00000611716 KIF21BO75037 1637 aa25.74■■□□□ 1.71
PCSK6-214ENST00000611716 FHAD1B1AJZ9 1412 aa25.73■■□□□ 1.71
PCSK6-214ENST00000611716 MPHOSPH9Q99550 1183 aa25.73■■□□□ 1.71
PCSK6-214ENST00000611716 WASHC2AQ641Q2 1341 aa25.72■■□□□ 1.71
PCSK6-214ENST00000611716 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
PCSK6-214ENST00000611716 PNNQ9H307 717 aaKnown RBP25.69■■□□□ 1.7
PCSK6-214ENST00000611716 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms