RNA–Protein interactions for RNA: ENST00000610404.4

TTR-204, Transcript of transthyretin, humanhuman

TSL 5 BASIC

Gene TTR, Length 1,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-204ENST00000610404 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
TTR-204ENST00000610404 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
TTR-204ENST00000610404 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
TTR-204ENST00000610404 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
TTR-204ENST00000610404 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
TTR-204ENST00000610404 HAX1O00165 279 aa17.05■□□□□ 0.32
TTR-204ENST00000610404 WDR62O43379 1518 aa17.04■□□□□ 0.32
TTR-204ENST00000610404 WIZO95785 1651 aa17.01■□□□□ 0.31
TTR-204ENST00000610404 PRKAR2AP13861 404 aaKnown RBP16.95■□□□□ 0.3
TTR-204ENST00000610404 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
TTR-204ENST00000610404 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
TTR-204ENST00000610404 CFTRP13569 1480 aa16.86■□□□□ 0.29
TTR-204ENST00000610404 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
TTR-204ENST00000610404 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
TTR-204ENST00000610404 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
TTR-204ENST00000610404 EVX2Q03828 476 aa16.77■□□□□ 0.28
TTR-204ENST00000610404 TOP2AP11388 1531 aaKnown RBP16.76■□□□□ 0.27
TTR-204ENST00000610404 CHADLQ6NUI6 762 aa16.72■□□□□ 0.27
TTR-204ENST00000610404 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
TTR-204ENST00000610404 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
TTR-204ENST00000610404 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
TTR-204ENST00000610404 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
TTR-204ENST00000610404 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
TTR-204ENST00000610404 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
TTR-204ENST00000610404 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
TTR-204ENST00000610404 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
TTR-204ENST00000610404 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
TTR-204ENST00000610404 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
TTR-204ENST00000610404 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
TTR-204ENST00000610404 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
TTR-204ENST00000610404 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
TTR-204ENST00000610404 FARP1Q9Y4F1 1045 aaPredicted RBP16.52■□□□□ 0.24
TTR-204ENST00000610404 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
TTR-204ENST00000610404 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
TTR-204ENST00000610404 GABBR2O75899 941 aa16.45■□□□□ 0.22
TTR-204ENST00000610404 CYB5RLQ6IPT4 315 aa16.45■□□□□ 0.22
TTR-204ENST00000610404 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
TTR-204ENST00000610404 CHD1O14646 1710 aa16.44■□□□□ 0.22
TTR-204ENST00000610404 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
TTR-204ENST00000610404 CD44P16070 742 aaKnown RBP16.42■□□□□ 0.22
TTR-204ENST00000610404 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
TTR-204ENST00000610404 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
TTR-204ENST00000610404 CREBZFQ9NS37 354 aa16.38■□□□□ 0.21
TTR-204ENST00000610404 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
TTR-204ENST00000610404 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
TTR-204ENST00000610404 SOGA1O94964 1423 aa16.29■□□□□ 0.2
TTR-204ENST00000610404 CLCN6P51797 869 aa16.29■□□□□ 0.2
TTR-204ENST00000610404 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
TTR-204ENST00000610404 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
TTR-204ENST00000610404 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
TTR-204ENST00000610404 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
TTR-204ENST00000610404 CUX1P39880 1505 aa16.2■□□□□ 0.18
TTR-204ENST00000610404 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
TTR-204ENST00000610404 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
TTR-204ENST00000610404 PROM2Q8N271 834 aa16.19■□□□□ 0.18
TTR-204ENST00000610404 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
TTR-204ENST00000610404 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
TTR-204ENST00000610404 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
TTR-204ENST00000610404 ZNF579Q8NAF0 562 aaKnown RBP16.17■□□□□ 0.18
TTR-204ENST00000610404 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
TTR-204ENST00000610404 NPM1P06748 294 aaKnown RBP eCLIP16.14■□□□□ 0.17
TTR-204ENST00000610404 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
TTR-204ENST00000610404 PBRM1Q86U86 1689 aa16.09■□□□□ 0.17
TTR-204ENST00000610404 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
TTR-204ENST00000610404 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
TTR-204ENST00000610404 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
TTR-204ENST00000610404 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
TTR-204ENST00000610404 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
TTR-204ENST00000610404 LHX8Q68G74 356 aa16.03■□□□□ 0.16
TTR-204ENST00000610404 DCBLD2Q96PD2 775 aa16.03■□□□□ 0.16
TTR-204ENST00000610404 ERCC6L2Q5T890 1561 aa16.01■□□□□ 0.15
TTR-204ENST00000610404 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
TTR-204ENST00000610404 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
TTR-204ENST00000610404 CEP170Q5SW79 1584 aa15.95■□□□□ 0.14
TTR-204ENST00000610404 NUP160Q12769 1436 aa15.94■□□□□ 0.14
TTR-204ENST00000610404 GALR2O43603 387 aaPredicted RBP15.94■□□□□ 0.14
TTR-204ENST00000610404 PHF12Q96QT6 1004 aa15.93■□□□□ 0.14
TTR-204ENST00000610404 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
TTR-204ENST00000610404 PLEKHG5O94827 1062 aa15.89■□□□□ 0.13
TTR-204ENST00000610404 SHROOM2Q13796 1616 aa15.89■□□□□ 0.13
TTR-204ENST00000610404 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
TTR-204ENST00000610404 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
TTR-204ENST00000610404 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
TTR-204ENST00000610404 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
TTR-204ENST00000610404 MIER1Q8N108 512 aa15.84■□□□□ 0.13
TTR-204ENST00000610404 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
TTR-204ENST00000610404 KIF13AQ9H1H9 1805 aa15.8■□□□□ 0.12
TTR-204ENST00000610404 PRG4Q92954 1404 aaPredicted RBP15.8■□□□□ 0.12
TTR-204ENST00000610404 TSPYL2Q9H2G4 693 aaPredicted RBP15.79■□□□□ 0.12
TTR-204ENST00000610404 FKBP8Q14318 412 aa15.76■□□□□ 0.11
TTR-204ENST00000610404 JPH4Q96JJ6 628 aa15.76■□□□□ 0.11
TTR-204ENST00000610404 MS4A3Q96HJ5 214 aa15.73■□□□□ 0.11
TTR-204ENST00000610404 CCDC61Q9Y6R9 512 aa15.73■□□□□ 0.11
TTR-204ENST00000610404 RUSC2Q8N2Y8 1516 aa15.73■□□□□ 0.11
TTR-204ENST00000610404 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
TTR-204ENST00000610404 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.1
TTR-204ENST00000610404 FAM69CQ0P6D2 419 aa15.69■□□□□ 0.1
TTR-204ENST00000610404 ADCY10Q96PN6 1610 aa15.67■□□□□ 0.1
TTR-204ENST00000610404 MAPKBP1O60336 1514 aa15.67■□□□□ 0.1
TTR-204ENST00000610404 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms