RNA–Protein interactions for RNA: ENST00000608682.1

AP004247.3-201, humanhuman

BASIC

Gene AP004247.3, Length 624 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.3-201ENST00000608682 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
AP004247.3-201ENST00000608682 NUBP1P53384 320 aa9.72□□□□□ -0.85
AP004247.3-201ENST00000608682 REM2Q8IYK8 340 aaPredicted RBP9.71□□□□□ -0.86
AP004247.3-201ENST00000608682 RNF25Q96BH1 459 aaPredicted RBP9.71□□□□□ -0.86
AP004247.3-201ENST00000608682 HS6ST3Q8IZP7 471 aa9.7□□□□□ -0.86
AP004247.3-201ENST00000608682 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
AP004247.3-201ENST00000608682 CREBZFQ9NS37 354 aa9.67□□□□□ -0.86
AP004247.3-201ENST00000608682 RIOK3O14730 519 aaKnown RBP9.65□□□□□ -0.86
AP004247.3-201ENST00000608682 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
AP004247.3-201ENST00000608682 TPRNQ4KMQ1 711 aa9.63□□□□□ -0.87
AP004247.3-201ENST00000608682 MNX1P50219 401 aaPredicted RBP9.6□□□□□ -0.87
AP004247.3-201ENST00000608682 NKX1-1Q15270 411 aaPredicted RBP9.6□□□□□ -0.87
AP004247.3-201ENST00000608682 STK25O00506 426 aa9.59□□□□□ -0.87
AP004247.3-201ENST00000608682 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
AP004247.3-201ENST00000608682 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
AP004247.3-201ENST00000608682 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
AP004247.3-201ENST00000608682 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
AP004247.3-201ENST00000608682 GTPBP6O43824 516 aaPredicted RBP9.54□□□□□ -0.88
AP004247.3-201ENST00000608682 PYGBP11216 843 aa9.53□□□□□ -0.88
AP004247.3-201ENST00000608682 CHRM1P11229 460 aaPredicted RBP9.53□□□□□ -0.88
AP004247.3-201ENST00000608682 NBR1Q14596 966 aa9.53□□□□□ -0.88
AP004247.3-201ENST00000608682 STK24Q9Y6E0 443 aa9.52□□□□□ -0.89
AP004247.3-201ENST00000608682 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.51□□□□□ -0.89
AP004247.3-201ENST00000608682 ZFP91Q96JP5 570 aaPredicted RBP9.51□□□□□ -0.89
AP004247.3-201ENST00000608682 BCL11BQ9C0K0 894 aaPredicted RBP9.51□□□□□ -0.89
AP004247.3-201ENST00000608682 SGIP1Q9BQI5 828 aa9.45□□□□□ -0.9
AP004247.3-201ENST00000608682 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
AP004247.3-201ENST00000608682 TSPYL2Q9H2G4 693 aaPredicted RBP9.44□□□□□ -0.9
AP004247.3-201ENST00000608682 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
AP004247.3-201ENST00000608682 RYDENQ9NUL5 291 aaKnown RBP9.4□□□□□ -0.9
AP004247.3-201ENST00000608682 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
AP004247.3-201ENST00000608682 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
AP004247.3-201ENST00000608682 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
AP004247.3-201ENST00000608682 ZNF467Q7Z7K2 595 aaPredicted RBP9.35□□□□□ -0.91
AP004247.3-201ENST00000608682 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
AP004247.3-201ENST00000608682 PCDHB13Q9Y5F0 798 aa9.35□□□□□ -0.91
AP004247.3-201ENST00000608682 PDAP1Q13442 181 aaKnown RBP9.32□□□□□ -0.92
AP004247.3-201ENST00000608682 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
AP004247.3-201ENST00000608682 PSEN1P49768 467 aa9.28□□□□□ -0.92
AP004247.3-201ENST00000608682 CADPS2Q86UW7 1296 aa9.28□□□□□ -0.92
AP004247.3-201ENST00000608682 POTEHQ6S545 545 aa9.27□□□□□ -0.93
AP004247.3-201ENST00000608682 CCDC61Q9Y6R9 512 aa9.27□□□□□ -0.93
AP004247.3-201ENST00000608682 WDR70Q9NW82 654 aa9.26□□□□□ -0.93
AP004247.3-201ENST00000608682 P3H3Q8IVL6 736 aa9.24□□□□□ -0.93
AP004247.3-201ENST00000608682 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
AP004247.3-201ENST00000608682 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
AP004247.3-201ENST00000608682 PAK3O75914 559 aaPredicted RBP9.22□□□□□ -0.93
AP004247.3-201ENST00000608682 IFNL1Q8IU54 200 aa9.21□□□□□ -0.94
AP004247.3-201ENST00000608682 KCNV2Q8TDN2 545 aa9.2□□□□□ -0.94
AP004247.3-201ENST00000608682 MAP3K13O43283 966 aa9.19□□□□□ -0.94
AP004247.3-201ENST00000608682 PPP1R37O75864 691 aa9.18□□□□□ -0.94
AP004247.3-201ENST00000608682 EFCAB3Q8N7B9 438 aa9.18□□□□□ -0.94
AP004247.3-201ENST00000608682 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
AP004247.3-201ENST00000608682 KIF12Q96FN5 646 aa9.16□□□□□ -0.94
AP004247.3-201ENST00000608682 PHF8Q9UPP1 1060 aa9.15□□□□□ -0.94
AP004247.3-201ENST00000608682 NLRP6P59044 892 aa9.14□□□□□ -0.95
AP004247.3-201ENST00000608682 FBXO22Q8NEZ5 403 aa9.13□□□□□ -0.95
AP004247.3-201ENST00000608682 CD44P16070 742 aaKnown RBP9.12□□□□□ -0.95
AP004247.3-201ENST00000608682 SOX12O15370 315 aa9.11□□□□□ -0.95
AP004247.3-201ENST00000608682 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
AP004247.3-201ENST00000608682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.1□□□□□ -0.95
AP004247.3-201ENST00000608682 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
AP004247.3-201ENST00000608682 PHF12Q96QT6 1004 aa9.08□□□□□ -0.96
AP004247.3-201ENST00000608682 E2F4Q16254 413 aa9.07□□□□□ -0.96
AP004247.3-201ENST00000608682 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
AP004247.3-201ENST00000608682 ARHGEF1Q92888 912 aaKnown RBP9.06□□□□□ -0.96
AP004247.3-201ENST00000608682 C19orf67A6NJJ6 358 aa9.04□□□□□ -0.96
AP004247.3-201ENST00000608682 GOLGA2Q08379 1002 aa9.03□□□□□ -0.96
AP004247.3-201ENST00000608682 MS4A4AQ96JQ5 239 aa9.03□□□□□ -0.96
AP004247.3-201ENST00000608682 LARP6Q9BRS8 491 aaKnown RBP9.03□□□□□ -0.96
AP004247.3-201ENST00000608682 SEMA3EO15041 775 aa9.02□□□□□ -0.97
AP004247.3-201ENST00000608682 TMEM106CQ9BVX2 250 aa9.02□□□□□ -0.97
AP004247.3-201ENST00000608682 NCKAP5LQ9HCH0 1330 aa9.02□□□□□ -0.97
AP004247.3-201ENST00000608682 GTF3C3Q9Y5Q9 886 aa9.01□□□□□ -0.97
AP004247.3-201ENST00000608682 HAX1O00165 279 aa9□□□□□ -0.97
AP004247.3-201ENST00000608682 PDE4AP27815 886 aa8.99□□□□□ -0.97
AP004247.3-201ENST00000608682 TRPC6Q9Y210 931 aa8.98□□□□□ -0.97
AP004247.3-201ENST00000608682 TESPA1A2RU30 521 aaPredicted RBP8.97□□□□□ -0.97
AP004247.3-201ENST00000608682 TIMELESSQ9UNS1 1208 aa8.97□□□□□ -0.97
AP004247.3-201ENST00000608682 MKRN3Q13064 507 aaKnown RBP8.96□□□□□ -0.98
AP004247.3-201ENST00000608682 TMEM132AQ24JP5 1023 aa8.96□□□□□ -0.98
AP004247.3-201ENST00000608682 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.98
AP004247.3-201ENST00000608682 MS4A3Q96HJ5 214 aa8.96□□□□□ -0.98
AP004247.3-201ENST00000608682 DDX27Q96GQ7 796 aaKnown RBP8.95□□□□□ -0.98
AP004247.3-201ENST00000608682 MFSD10Q14728 455 aa8.94□□□□□ -0.98
AP004247.3-201ENST00000608682 CRISPLD2Q9H0B8 497 aa8.94□□□□□ -0.98
AP004247.3-201ENST00000608682 CLCN6P51797 869 aa8.92□□□□□ -0.98
AP004247.3-201ENST00000608682 BRPF1P55201 1214 aaPredicted RBP8.91□□□□□ -0.98
AP004247.3-201ENST00000608682 SMYD5Q6GMV2 418 aa8.9□□□□□ -0.98
AP004247.3-201ENST00000608682 SLC24A3Q9HC58 644 aa8.9□□□□□ -0.98
AP004247.3-201ENST00000608682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.99
AP004247.3-201ENST00000608682 NEUROD2Q15784 382 aa8.88□□□□□ -0.99
AP004247.3-201ENST00000608682 TTLL13PA6NNM8 815 aa8.87□□□□□ -0.99
AP004247.3-201ENST00000608682 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
AP004247.3-201ENST00000608682 TIE1P35590 1138 aa8.85□□□□□ -0.99
AP004247.3-201ENST00000608682 EVX2Q03828 476 aa8.85□□□□□ -0.99
AP004247.3-201ENST00000608682 PPP1R15BQ5SWA1 713 aa8.85□□□□□ -0.99
AP004247.3-201ENST00000608682 ARIH1Q9Y4X5 557 aaPredicted RBP8.85□□□□□ -0.99
AP004247.3-201ENST00000608682 BMP2KQ9NSY1 1161 aaPredicted RBP8.84□□□□□ -0.99
AP004247.3-201ENST00000608682 ZMYND10O75800 440 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms