RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ZNF579Q8NAF0 562 aaKnown RBP10.52□□□□□ -0.73
RNU6-88P-201ENST00000606801 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.73
RNU6-88P-201ENST00000606801 GABBR2O75899 941 aa10.47□□□□□ -0.73
RNU6-88P-201ENST00000606801 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
RNU6-88P-201ENST00000606801 CLCN6P51797 869 aa10.46□□□□□ -0.73
RNU6-88P-201ENST00000606801 FAM212AQ96EL1 285 aa10.46□□□□□ -0.73
RNU6-88P-201ENST00000606801 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
RNU6-88P-201ENST00000606801 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
RNU6-88P-201ENST00000606801 GSE1Q14687 1217 aa10.39□□□□□ -0.75
RNU6-88P-201ENST00000606801 ECM2O94769 699 aaPredicted RBP10.38□□□□□ -0.75
RNU6-88P-201ENST00000606801 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
RNU6-88P-201ENST00000606801 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
RNU6-88P-201ENST00000606801 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
RNU6-88P-201ENST00000606801 RGL2O15211 777 aa10.34□□□□□ -0.75
RNU6-88P-201ENST00000606801 MAP3K13O43283 966 aa10.33□□□□□ -0.76
RNU6-88P-201ENST00000606801 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
RNU6-88P-201ENST00000606801 PYGBP11216 843 aa10.31□□□□□ -0.76
RNU6-88P-201ENST00000606801 SGIP1Q9BQI5 828 aa10.3□□□□□ -0.76
RNU6-88P-201ENST00000606801 CHRM1P11229 460 aaPredicted RBP10.29□□□□□ -0.76
RNU6-88P-201ENST00000606801 PCDHB13Q9Y5F0 798 aa10.28□□□□□ -0.76
RNU6-88P-201ENST00000606801 POTEIP0CG38 1075 aa10.26□□□□□ -0.77
RNU6-88P-201ENST00000606801 RNF25Q96BH1 459 aaPredicted RBP10.26□□□□□ -0.77
RNU6-88P-201ENST00000606801 DCBLD2Q96PD2 775 aa10.26□□□□□ -0.77
RNU6-88P-201ENST00000606801 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
RNU6-88P-201ENST00000606801 TRIM41Q8WV44 630 aa10.25□□□□□ -0.77
RNU6-88P-201ENST00000606801 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
RNU6-88P-201ENST00000606801 TRPC6Q9Y210 931 aa10.23□□□□□ -0.77
RNU6-88P-201ENST00000606801 ASTLQ6HA08 431 aaPredicted RBP10.19□□□□□ -0.78
RNU6-88P-201ENST00000606801 PCDHB8Q9UN66 801 aa10.19□□□□□ -0.78
RNU6-88P-201ENST00000606801 TIE1P35590 1138 aa10.18□□□□□ -0.78
RNU6-88P-201ENST00000606801 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
RNU6-88P-201ENST00000606801 ATMINO43313 823 aaPredicted RBP10.17□□□□□ -0.78
RNU6-88P-201ENST00000606801 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
RNU6-88P-201ENST00000606801 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
RNU6-88P-201ENST00000606801 PELP1Q8IZL8 1130 aaKnown RBP10.14□□□□□ -0.79
RNU6-88P-201ENST00000606801 TTLL13PA6NNM8 815 aa10.13□□□□□ -0.79
RNU6-88P-201ENST00000606801 ATN1P54259 1190 aaPredicted RBP10.13□□□□□ -0.79
RNU6-88P-201ENST00000606801 RIOK3O14730 519 aaKnown RBP10.12□□□□□ -0.79
RNU6-88P-201ENST00000606801 PLCB2Q00722 1185 aa10.11□□□□□ -0.79
RNU6-88P-201ENST00000606801 TMEM106CQ9BVX2 250 aa10.11□□□□□ -0.79
RNU6-88P-201ENST00000606801 CHGAP10645 457 aaKnown RBP10.1□□□□□ -0.79
RNU6-88P-201ENST00000606801 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
RNU6-88P-201ENST00000606801 PSEN1P49768 467 aa10.07□□□□□ -0.8
RNU6-88P-201ENST00000606801 PDAP1Q13442 181 aaKnown RBP10.07□□□□□ -0.8
RNU6-88P-201ENST00000606801 HS6ST3Q8IZP7 471 aa10.07□□□□□ -0.8
RNU6-88P-201ENST00000606801 TRIM35Q9UPQ4 493 aa10.06□□□□□ -0.8
RNU6-88P-201ENST00000606801 VGFO15240 615 aaPredicted RBP10.05□□□□□ -0.8
RNU6-88P-201ENST00000606801 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
RNU6-88P-201ENST00000606801 DNAJC5Q9H3Z4 198 aa10.04□□□□□ -0.8
RNU6-88P-201ENST00000606801 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.03□□□□□ -0.8
RNU6-88P-201ENST00000606801 C7P10643 843 aa10.03□□□□□ -0.8
RNU6-88P-201ENST00000606801 ZFP91Q96JP5 570 aaPredicted RBP10.03□□□□□ -0.8
RNU6-88P-201ENST00000606801 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
RNU6-88P-201ENST00000606801 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
RNU6-88P-201ENST00000606801 IER5LQ5T953 404 aa9.99□□□□□ -0.81
RNU6-88P-201ENST00000606801 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
RNU6-88P-201ENST00000606801 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
RNU6-88P-201ENST00000606801 STK25O00506 426 aa9.98□□□□□ -0.81
RNU6-88P-201ENST00000606801 TAOK2Q9UL54 1235 aa9.98□□□□□ -0.81
RNU6-88P-201ENST00000606801 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
RNU6-88P-201ENST00000606801 POTEFA5A3E0 1075 aa9.96□□□□□ -0.82
RNU6-88P-201ENST00000606801 LHX8Q68G74 356 aa9.96□□□□□ -0.82
RNU6-88P-201ENST00000606801 CFAP44Q96MT7 982 aa9.95□□□□□ -0.82
RNU6-88P-201ENST00000606801 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
RNU6-88P-201ENST00000606801 CABP2Q9NPB3 220 aa9.94□□□□□ -0.82
RNU6-88P-201ENST00000606801 COLQQ9Y215 455 aaPredicted RBP9.94□□□□□ -0.82
RNU6-88P-201ENST00000606801 STK24Q9Y6E0 443 aa9.94□□□□□ -0.82
RNU6-88P-201ENST00000606801 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
RNU6-88P-201ENST00000606801 SEC24BO95487 1268 aa9.93□□□□□ -0.82
RNU6-88P-201ENST00000606801 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
RNU6-88P-201ENST00000606801 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
RNU6-88P-201ENST00000606801 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
RNU6-88P-201ENST00000606801 HAP1P54257 671 aaPredicted RBP9.92□□□□□ -0.82
RNU6-88P-201ENST00000606801 GTPBP6O43824 516 aaPredicted RBP9.91□□□□□ -0.82
RNU6-88P-201ENST00000606801 OCEL1Q9H607 264 aa9.89□□□□□ -0.83
RNU6-88P-201ENST00000606801 PLCG2P16885 1265 aa9.88□□□□□ -0.83
RNU6-88P-201ENST00000606801 EFCAB3Q8N7B9 438 aa9.88□□□□□ -0.83
RNU6-88P-201ENST00000606801 ILDR1Q86SU0 546 aaPredicted RBP9.87□□□□□ -0.83
RNU6-88P-201ENST00000606801 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
RNU6-88P-201ENST00000606801 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
RNU6-88P-201ENST00000606801 PDCD7Q8N8D1 485 aaKnown RBP9.86□□□□□ -0.83
RNU6-88P-201ENST00000606801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.86□□□□□ -0.83
RNU6-88P-201ENST00000606801 SOX12O15370 315 aa9.83□□□□□ -0.84
RNU6-88P-201ENST00000606801 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
RNU6-88P-201ENST00000606801 OTUD5Q96G74 571 aa9.81□□□□□ -0.84
RNU6-88P-201ENST00000606801 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
RNU6-88P-201ENST00000606801 MFRPQ9BY79 579 aa9.8□□□□□ -0.84
RNU6-88P-201ENST00000606801 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
RNU6-88P-201ENST00000606801 PHF8Q9UPP1 1060 aa9.78□□□□□ -0.84
RNU6-88P-201ENST00000606801 DPY19L2Q6NUT2 758 aa9.77□□□□□ -0.85
RNU6-88P-201ENST00000606801 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
RNU6-88P-201ENST00000606801 NLRP6P59044 892 aa9.75□□□□□ -0.85
RNU6-88P-201ENST00000606801 FBXO22Q8NEZ5 403 aa9.75□□□□□ -0.85
RNU6-88P-201ENST00000606801 MS4A4AQ96JQ5 239 aa9.75□□□□□ -0.85
RNU6-88P-201ENST00000606801 SCUBE2Q9NQ36 999 aa9.75□□□□□ -0.85
RNU6-88P-201ENST00000606801 PPP1R37O75864 691 aa9.72□□□□□ -0.85
RNU6-88P-201ENST00000606801 BOLA1Q9Y3E2 137 aa9.71□□□□□ -0.86
RNU6-88P-201ENST00000606801 RYDENQ9NUL5 291 aaKnown RBP9.7□□□□□ -0.86
RNU6-88P-201ENST00000606801 TMEM121BQ9BXQ6 578 aaPredicted RBP9.68□□□□□ -0.86
RNU6-88P-201ENST00000606801 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms