RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 SENP3-EIF4A1A0A087X0R7 540 aa21.57■■□□□ 1.04
RER1-209ENST00000605895 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
RER1-209ENST00000605895 SMARCA4P51532 1647 aa21.52■■□□□ 1.03
RER1-209ENST00000605895 RTN4Q9NQC3 1192 aaKnown RBP21.51■■□□□ 1.03
RER1-209ENST00000605895 PAK3O75914 559 aaPredicted RBP21.5■■□□□ 1.03
RER1-209ENST00000605895 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
RER1-209ENST00000605895 CCER2I3L3R5 266 aa21.47■■□□□ 1.03
RER1-209ENST00000605895 ARAP1Q96P48 1450 aa21.47■■□□□ 1.03
RER1-209ENST00000605895 CCDC136Q96JN2 1154 aa21.47■■□□□ 1.03
RER1-209ENST00000605895 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
RER1-209ENST00000605895 MAPKBP1O60336 1514 aa21.46■■□□□ 1.03
RER1-209ENST00000605895 FAM9BQ8IZU0 186 aa21.43■■□□□ 1.02
RER1-209ENST00000605895 RRBP1Q9P2E9 1410 aaKnown RBP21.42■■□□□ 1.02
RER1-209ENST00000605895 CCDC184Q52MB2 194 aa21.42■■□□□ 1.02
RER1-209ENST00000605895 SALL2Q9Y467 1007 aaPredicted RBP21.4■■□□□ 1.02
RER1-209ENST00000605895 NOP58Q9Y2X3 529 aaKnown RBP21.36■■□□□ 1.01
RER1-209ENST00000605895 SETD5Q9C0A6 1442 aa21.36■■□□□ 1.01
RER1-209ENST00000605895 PPP4R2Q9NY27 417 aa21.34■■□□□ 1.01
RER1-209ENST00000605895 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.32■■□□□ 1
RER1-209ENST00000605895 IL27Q8NEV9 243 aa21.32■■□□□ 1
RER1-209ENST00000605895 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
RER1-209ENST00000605895 TONSLQ96HA7 1378 aa21.28■■□□□ 1
RER1-209ENST00000605895 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
RER1-209ENST00000605895 PHLDB1Q86UU1 1377 aa21.25■□□□□ 0.99
RER1-209ENST00000605895 CUX2O14529 1486 aa21.23■□□□□ 0.99
RER1-209ENST00000605895 RTL5Q5HYW3 569 aaPredicted RBP21.23■□□□□ 0.99
RER1-209ENST00000605895 MRS2Q9HD23 443 aa21.19■□□□□ 0.98
RER1-209ENST00000605895 ARHGAP35Q9NRY4 1499 aa21.17■□□□□ 0.98
RER1-209ENST00000605895 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
RER1-209ENST00000605895 LAS1LQ9Y4W2 734 aaKnown RBP21.16■□□□□ 0.98
RER1-209ENST00000605895 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
RER1-209ENST00000605895 HSPA5P11021 654 aaKnown RBP21.15■□□□□ 0.98
RER1-209ENST00000605895 PRXQ9BXM0 1461 aa21.15■□□□□ 0.98
RER1-209ENST00000605895 WASHC2AQ641Q2 1341 aa21.14■□□□□ 0.97
RER1-209ENST00000605895 ZBTB47Q9UFB7 747 aaPredicted RBP21.14■□□□□ 0.97
RER1-209ENST00000605895 ANP32AP39687 249 aaKnown RBP21.13■□□□□ 0.97
RER1-209ENST00000605895 BICRAQ9NZM4 1560 aa21.09■□□□□ 0.97
RER1-209ENST00000605895 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
RER1-209ENST00000605895 IPO9Q96P70 1041 aaKnown RBP21.06■□□□□ 0.96
RER1-209ENST00000605895 CHIC2Q9UKJ5 165 aa21.05■□□□□ 0.96
RER1-209ENST00000605895 TIMELESSQ9UNS1 1208 aa21.04■□□□□ 0.96
RER1-209ENST00000605895 AKNAQ7Z591 1439 aa21.04■□□□□ 0.96
RER1-209ENST00000605895 FOXD1Q16676 465 aa21.03■□□□□ 0.96
RER1-209ENST00000605895 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
RER1-209ENST00000605895 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
RER1-209ENST00000605895 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
RER1-209ENST00000605895 NEFMP07197 916 aa20.99■□□□□ 0.95
RER1-209ENST00000605895 LRRC9Q6ZRR7 1453 aa20.97■□□□□ 0.95
RER1-209ENST00000605895 ERICH3Q5RHP9 1530 aa20.97■□□□□ 0.95
RER1-209ENST00000605895 EIF5BO60841 1220 aaKnown RBP20.97■□□□□ 0.95
RER1-209ENST00000605895 ERICH6BQ5W0A0 696 aa20.96■□□□□ 0.95
RER1-209ENST00000605895 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
RER1-209ENST00000605895 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
RER1-209ENST00000605895 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
RER1-209ENST00000605895 TIAM1Q13009 1591 aa20.92■□□□□ 0.94
RER1-209ENST00000605895 SKAP1Q86WV1 359 aa20.92■□□□□ 0.94
RER1-209ENST00000605895 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
RER1-209ENST00000605895 ZBED9Q6R2W3 1325 aa20.91■□□□□ 0.94
RER1-209ENST00000605895 BRPF3Q9ULD4 1205 aa20.9■□□□□ 0.94
RER1-209ENST00000605895 AQRO60306 1485 aaKnown RBP eCLIP20.87■□□□□ 0.932e-6■■■□□ 15.2
RER1-209ENST00000605895 ZNF326Q5BKZ1 582 aaKnown RBP20.86■□□□□ 0.93
RER1-209ENST00000605895 CCDC18Q5T9S5 1454 aa20.85■□□□□ 0.93
RER1-209ENST00000605895 L3MBTL2Q969R5 705 aa20.85■□□□□ 0.93
RER1-209ENST00000605895 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
RER1-209ENST00000605895 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
RER1-209ENST00000605895 SLC4A3P48751 1232 aa20.84■□□□□ 0.93
RER1-209ENST00000605895 PTPRKQ15262 1439 aa20.83■□□□□ 0.93
RER1-209ENST00000605895 CUX1P39880 1505 aa20.83■□□□□ 0.93
RER1-209ENST00000605895 IGF1RP08069 1367 aa20.8■□□□□ 0.92
RER1-209ENST00000605895 CNTLNQ9NXG0 1405 aa20.79■□□□□ 0.92
RER1-209ENST00000605895 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
RER1-209ENST00000605895 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
RER1-209ENST00000605895 EXOC6Q8TAG9 804 aa20.78■□□□□ 0.92
RER1-209ENST00000605895 NUDCQ9Y266 331 aa20.78■□□□□ 0.92
RER1-209ENST00000605895 NBPF8Q3BBV2 869 aa20.75■□□□□ 0.91
RER1-209ENST00000605895 CCDC7Q96M83 1385 aa20.75■□□□□ 0.91
RER1-209ENST00000605895 KIF7Q2M1P5 1343 aa20.74■□□□□ 0.91
RER1-209ENST00000605895 PDE4AP27815 886 aa20.73■□□□□ 0.91
RER1-209ENST00000605895 UACAQ9BZF9 1416 aa20.73■□□□□ 0.91
RER1-209ENST00000605895 MTUS2Q5JR59 1369 aa20.73■□□□□ 0.91
RER1-209ENST00000605895 BIVM-ERCC5R4GMW8 1640 aa20.7■□□□□ 0.9
RER1-209ENST00000605895 FGD6Q6ZV73 1430 aa20.69■□□□□ 0.9
RER1-209ENST00000605895 PCF11O94913 1555 aaKnown RBP20.69■□□□□ 0.9
RER1-209ENST00000605895 PLIN1O60240 522 aa20.68■□□□□ 0.9
RER1-209ENST00000605895 TMC1Q8TDI8 760 aa20.67■□□□□ 0.9
RER1-209ENST00000605895 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
RER1-209ENST00000605895 NAIPQ13075 1403 aa20.65■□□□□ 0.9
RER1-209ENST00000605895 KDM5BQ9UGL1 1544 aa20.64■□□□□ 0.9
RER1-209ENST00000605895 SMG6Q86US8 1419 aaKnown RBP20.63■□□□□ 0.89
RER1-209ENST00000605895 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
RER1-209ENST00000605895 FRAT1Q92837 279 aaPredicted RBP20.61■□□□□ 0.89
RER1-209ENST00000605895 BACH2Q9BYV9 841 aa20.59■□□□□ 0.89
RER1-209ENST00000605895 FMN1Q68DA7 1419 aa20.58■□□□□ 0.89
RER1-209ENST00000605895 GSE1Q14687 1217 aa20.58■□□□□ 0.89
RER1-209ENST00000605895 NCOA1Q15788 1441 aa20.58■□□□□ 0.88
RER1-209ENST00000605895 MAP3K1Q13233 1512 aa20.57■□□□□ 0.88
RER1-209ENST00000605895 NFKBIBQ15653 356 aa20.57■□□□□ 0.88
RER1-209ENST00000605895 ARXQ96QS3 562 aa20.57■□□□□ 0.88
RER1-209ENST00000605895 NCOA2Q15596 1464 aa20.57■□□□□ 0.88
RER1-209ENST00000605895 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms