RNA–Protein interactions for RNA: ENST00000604751.1

SNX30-203, Transcript of sorting nexin family member 30, humanhuman

TSL 2

Gene SNX30, Length 4,068 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-203ENST00000604751 TOPBP1Q92547 1522 aa12.15□□□□□ -0.46
SNX30-203ENST00000604751 EFCAB2Q5VUJ9 269 aa12.14□□□□□ -0.47
SNX30-203ENST00000604751 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
SNX30-203ENST00000604751 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
SNX30-203ENST00000604751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNX30-203ENST00000604751 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
SNX30-203ENST00000604751 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
SNX30-203ENST00000604751 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
SNX30-203ENST00000604751 SNAPC4Q5SXM2 1469 aa12.07□□□□□ -0.48
SNX30-203ENST00000604751 PRG4Q92954 1404 aaPredicted RBP12.07□□□□□ -0.48
SNX30-203ENST00000604751 CLIP1P30622 1438 aa12.06□□□□□ -0.48
SNX30-203ENST00000604751 GOLGA3Q08378 1498 aa12.06□□□□□ -0.48
SNX30-203ENST00000604751 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
SNX30-203ENST00000604751 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
SNX30-203ENST00000604751 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
SNX30-203ENST00000604751 RAPGEF2Q9Y4G8 1499 aa12.02□□□□□ -0.48
SNX30-203ENST00000604751 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
SNX30-203ENST00000604751 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
SNX30-203ENST00000604751 GGT6Q6P531 493 aa12□□□□□ -0.49
SNX30-203ENST00000604751 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
SNX30-203ENST00000604751 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
SNX30-203ENST00000604751 URB2Q14146 1524 aaKnown RBP11.98□□□□□ -0.49
SNX30-203ENST00000604751 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
SNX30-203ENST00000604751 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
SNX30-203ENST00000604751 SYNJ1O43426 1573 aa11.97□□□□□ -0.49
SNX30-203ENST00000604751 PCGF6Q9BYE7 350 aa11.97□□□□□ -0.49
SNX30-203ENST00000604751 CHIC2Q9UKJ5 165 aa11.96□□□□□ -0.49
SNX30-203ENST00000604751 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.49
SNX30-203ENST00000604751 IGF1RP08069 1367 aa11.95□□□□□ -0.5
SNX30-203ENST00000604751 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
SNX30-203ENST00000604751 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
SNX30-203ENST00000604751 SPAG9O60271 1321 aaKnown RBP11.9□□□□□ -0.51
SNX30-203ENST00000604751 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
SNX30-203ENST00000604751 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
SNX30-203ENST00000604751 POLR3GLQ9BT43 218 aa11.88□□□□□ -0.51
SNX30-203ENST00000604751 KANK1Q14678 1352 aa11.88□□□□□ -0.51
SNX30-203ENST00000604751 CCER1Q8TC90 406 aaPredicted RBP11.87□□□□□ -0.51
SNX30-203ENST00000604751 EID1Q9Y6B2 187 aa11.86□□□□□ -0.51
SNX30-203ENST00000604751 WDR62O43379 1518 aa11.85□□□□□ -0.51
SNX30-203ENST00000604751 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
SNX30-203ENST00000604751 POGZQ7Z3K3 1410 aa11.84□□□□□ -0.51
SNX30-203ENST00000604751 ABCA10Q8WWZ4 1543 aa11.84□□□□□ -0.51
SNX30-203ENST00000604751 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
SNX30-203ENST00000604751 KIF3BO15066 747 aa11.83□□□□□ -0.52
SNX30-203ENST00000604751 KIAA0586Q9BVV6 1533 aa11.83□□□□□ -0.52
SNX30-203ENST00000604751 CUX1P39880 1505 aa11.82□□□□□ -0.52
SNX30-203ENST00000604751 WASHC2CQ9Y4E1 1318 aa11.82□□□□□ -0.52
SNX30-203ENST00000604751 UACAQ9BZF9 1416 aa11.8□□□□□ -0.52
SNX30-203ENST00000604751 FHOD3Q2V2M9 1422 aa11.79□□□□□ -0.52
SNX30-203ENST00000604751 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
SNX30-203ENST00000604751 RRP7BPQ9NSQ0 103 aa11.77□□□□□ -0.53
SNX30-203ENST00000604751 HNRNPMP52272 730 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNX30-203ENST00000604751 DMRT2Q9Y5R5 561 aa11.76□□□□□ -0.53
SNX30-203ENST00000604751 CD109Q6YHK3 1445 aa11.75□□□□□ -0.53
SNX30-203ENST00000604751 ACIN1Q9UKV3 1341 aaKnown RBP11.75□□□□□ -0.53
SNX30-203ENST00000604751 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
SNX30-203ENST00000604751 PLB1Q6P1J6 1458 aa11.74□□□□□ -0.53
SNX30-203ENST00000604751 RAPGEF3O95398 923 aa11.74□□□□□ -0.53
SNX30-203ENST00000604751 A0A0G2JS52 829 aa11.73□□□□□ -0.53
SNX30-203ENST00000604751 MYT1Q01538 1121 aa11.73□□□□□ -0.53
SNX30-203ENST00000604751 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
SNX30-203ENST00000604751 LMOD2Q6P5Q4 547 aa11.72□□□□□ -0.53
SNX30-203ENST00000604751 ERICH3Q5RHP9 1530 aa11.72□□□□□ -0.53
SNX30-203ENST00000604751 PHF23Q9BUL5 403 aaPredicted RBP11.71□□□□□ -0.53
SNX30-203ENST00000604751 TEX14Q8IWB6 1497 aa11.71□□□□□ -0.54
SNX30-203ENST00000604751 NEUROD1Q13562 356 aa11.7□□□□□ -0.54
SNX30-203ENST00000604751 CEP162Q5TB80 1403 aa11.7□□□□□ -0.54
SNX30-203ENST00000604751 TOP2BQ02880 1626 aa11.69□□□□□ -0.54
SNX30-203ENST00000604751 ARHGEF11O15085 1522 aa11.66□□□□□ -0.54
SNX30-203ENST00000604751 AFAP1Q8N556 730 aa11.66□□□□□ -0.54
SNX30-203ENST00000604751 EIF4G3O43432 1585 aaKnown RBP11.65□□□□□ -0.54
SNX30-203ENST00000604751 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
SNX30-203ENST00000604751 POGKQ9P215 609 aa11.64□□□□□ -0.55
SNX30-203ENST00000604751 PRDM2Q13029 1718 aa11.64□□□□□ -0.55
SNX30-203ENST00000604751 THEMISQ8N1K5 641 aaPredicted RBP11.63□□□□□ -0.55
SNX30-203ENST00000604751 ANKRD30AQ9BXX3 1397 aa11.62□□□□□ -0.55
SNX30-203ENST00000604751 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
SNX30-203ENST00000604751 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
SNX30-203ENST00000604751 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
SNX30-203ENST00000604751 RUSC2Q8N2Y8 1516 aa11.61□□□□□ -0.55
SNX30-203ENST00000604751 IQGAP2Q13576 1575 aa11.61□□□□□ -0.55
SNX30-203ENST00000604751 PHLDB1Q86UU1 1377 aa11.61□□□□□ -0.55
SNX30-203ENST00000604751 ZBTB7CA1YPR0 619 aa11.61□□□□□ -0.55
SNX30-203ENST00000604751 ASXL2Q76L83 1435 aa11.61□□□□□ -0.55
SNX30-203ENST00000604751 SCAPERQ9BY12 1400 aa11.6□□□□□ -0.55
SNX30-203ENST00000604751 THOC2Q8NI27 1593 aaKnown RBP11.6□□□□□ -0.55
SNX30-203ENST00000604751 CNGB1Q14028 1251 aaPredicted RBP11.59□□□□□ -0.55
SNX30-203ENST00000604751 ANKLE2Q86XL3 938 aa11.59□□□□□ -0.55
SNX30-203ENST00000604751 AKNAQ7Z591 1439 aa11.58□□□□□ -0.56
SNX30-203ENST00000604751 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
SNX30-203ENST00000604751 NEFMP07197 916 aa11.57□□□□□ -0.56
SNX30-203ENST00000604751 ARHGAP5Q13017 1502 aa11.56□□□□□ -0.56
SNX30-203ENST00000604751 CCDC9Q9Y3X0 531 aaKnown RBP11.56□□□□□ -0.56
SNX30-203ENST00000604751 DENND4BO75064 1496 aaPredicted RBP11.55□□□□□ -0.56
SNX30-203ENST00000604751 CUL7Q14999 1698 aa11.55□□□□□ -0.56
SNX30-203ENST00000604751 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
SNX30-203ENST00000604751 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
SNX30-203ENST00000604751 ATF3P18847 181 aa11.54□□□□□ -0.56
SNX30-203ENST00000604751 NUP160Q12769 1436 aa11.54□□□□□ -0.56
SNX30-203ENST00000604751 FOXD1Q16676 465 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms