RNA–Protein interactions for RNA: ENST00000604751.1

SNX30-203, Transcript of sorting nexin family member 30, humanhuman

TSL 2

Gene SNX30, Length 4,068 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-203ENST00000604751 NISCHQ9Y2I1 1504 aa16.45■□□□□ 0.22
SNX30-203ENST00000604751 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
SNX30-203ENST00000604751 ABCC9O60706 1549 aa14.94□□□□□ -0.02
SNX30-203ENST00000604751 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNX30-203ENST00000604751 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
SNX30-203ENST00000604751 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
SNX30-203ENST00000604751 CCDC180Q9P1Z9 1646 aa14.09□□□□□ -0.15
SNX30-203ENST00000604751 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
SNX30-203ENST00000604751 FAM9AQ8IZU1 332 aaPredicted RBP13.97□□□□□ -0.17
SNX30-203ENST00000604751 NACADO15069 1562 aa13.78□□□□□ -0.2
SNX30-203ENST00000604751 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
SNX30-203ENST00000604751 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
SNX30-203ENST00000604751 FBLN2P98095 1184 aa13.5□□□□□ -0.25
SNX30-203ENST00000604751 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
SNX30-203ENST00000604751 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
SNX30-203ENST00000604751 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
SNX30-203ENST00000604751 TTBK1Q5TCY1 1321 aaPredicted RBP13.34□□□□□ -0.27
SNX30-203ENST00000604751 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
SNX30-203ENST00000604751 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
SNX30-203ENST00000604751 RANGAP1P46060 587 aaPredicted RBP13.27□□□□□ -0.29
SNX30-203ENST00000604751 APLP2Q06481 763 aa13.26□□□□□ -0.29
SNX30-203ENST00000604751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
SNX30-203ENST00000604751 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
SNX30-203ENST00000604751 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
SNX30-203ENST00000604751 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
SNX30-203ENST00000604751 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNX30-203ENST00000604751 DNAJC5BQ9UF47 199 aa13.18□□□□□ -0.3
SNX30-203ENST00000604751 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
SNX30-203ENST00000604751 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
SNX30-203ENST00000604751 UBTFP17480 764 aaKnown RBP13.14□□□□□ -0.31
SNX30-203ENST00000604751 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
SNX30-203ENST00000604751 PDS5BQ9NTI5 1447 aa13.07□□□□□ -0.32
SNX30-203ENST00000604751 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
SNX30-203ENST00000604751 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
SNX30-203ENST00000604751 SMARCA2P51531 1590 aa12.97□□□□□ -0.33
SNX30-203ENST00000604751 EIF4G1Q04637 1599 aaKnown RBP12.88□□□□□ -0.35
SNX30-203ENST00000604751 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
SNX30-203ENST00000604751 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
SNX30-203ENST00000604751 ATAD2BQ9ULI0 1458 aa12.81□□□□□ -0.36
SNX30-203ENST00000604751 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
SNX30-203ENST00000604751 ESF1Q9H501 851 aaKnown RBP12.77□□□□□ -0.37
SNX30-203ENST00000604751 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
SNX30-203ENST00000604751 AEBP2Q6ZN18 517 aaPredicted RBP12.75□□□□□ -0.37
SNX30-203ENST00000604751 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
SNX30-203ENST00000604751 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
SNX30-203ENST00000604751 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
SNX30-203ENST00000604751 CDK11AQ9UQ88 783 aaPredicted RBP12.71□□□□□ -0.38
SNX30-203ENST00000604751 ARID3CA6NKF2 412 aa12.67□□□□□ -0.38
SNX30-203ENST00000604751 CHIC1Q5VXU3 224 aa12.66□□□□□ -0.38
SNX30-203ENST00000604751 P3H3Q8IVL6 736 aa12.65□□□□□ -0.38
SNX30-203ENST00000604751 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
SNX30-203ENST00000604751 PLPPR3Q6T4P5 718 aa12.62□□□□□ -0.39
SNX30-203ENST00000604751 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
SNX30-203ENST00000604751 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
SNX30-203ENST00000604751 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
SNX30-203ENST00000604751 SOGA1O94964 1423 aa12.58□□□□□ -0.39
SNX30-203ENST00000604751 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
SNX30-203ENST00000604751 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
SNX30-203ENST00000604751 CSRNP3Q8WYN3 585 aa12.57□□□□□ -0.4
SNX30-203ENST00000604751 KCNH8Q96L42 1107 aa12.57□□□□□ -0.4
SNX30-203ENST00000604751 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
SNX30-203ENST00000604751 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
SNX30-203ENST00000604751 KIF27Q86VH2 1401 aa12.49□□□□□ -0.41
SNX30-203ENST00000604751 MRC2Q9UBG0 1479 aa12.48□□□□□ -0.41
SNX30-203ENST00000604751 NESP48681 1621 aa12.48□□□□□ -0.41
SNX30-203ENST00000604751 PLEKHD1A6NEE1 506 aa12.47□□□□□ -0.41
SNX30-203ENST00000604751 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
SNX30-203ENST00000604751 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.41
SNX30-203ENST00000604751 HMGXB3Q12766 1538 aa12.45□□□□□ -0.42
SNX30-203ENST00000604751 CUX2O14529 1486 aa12.44□□□□□ -0.42
SNX30-203ENST00000604751 BCANQ96GW7 911 aa12.44□□□□□ -0.42
SNX30-203ENST00000604751 CARMIL2Q6F5E8 1435 aa12.43□□□□□ -0.42
SNX30-203ENST00000604751 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
SNX30-203ENST00000604751 JPH4Q96JJ6 628 aa12.4□□□□□ -0.42
SNX30-203ENST00000604751 ITGAEP38570 1179 aa12.39□□□□□ -0.43
SNX30-203ENST00000604751 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
SNX30-203ENST00000604751 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
SNX30-203ENST00000604751 WIZO95785 1651 aa12.36□□□□□ -0.43
SNX30-203ENST00000604751 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
SNX30-203ENST00000604751 CARMIL1Q5VZK9 1371 aa12.34□□□□□ -0.43
SNX30-203ENST00000604751 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
SNX30-203ENST00000604751 FAM69CQ0P6D2 419 aa12.32□□□□□ -0.44
SNX30-203ENST00000604751 FAM50AQ14320 339 aaKnown RBP12.31□□□□□ -0.44
SNX30-203ENST00000604751 CFTRP13569 1480 aa12.3□□□□□ -0.44
SNX30-203ENST00000604751 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
SNX30-203ENST00000604751 AQRO60306 1485 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNX30-203ENST00000604751 TSPY4P0CV99 314 aa12.28□□□□□ -0.44
SNX30-203ENST00000604751 TSPY10P0CW01 314 aa12.28□□□□□ -0.44
SNX30-203ENST00000604751 GAPVD1Q14C86 1478 aa12.24□□□□□ -0.45
SNX30-203ENST00000604751 PTPRGP23470 1445 aa12.23□□□□□ -0.45
SNX30-203ENST00000604751 MLECQ14165 292 aa12.23□□□□□ -0.45
SNX30-203ENST00000604751 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
SNX30-203ENST00000604751 TRIM52Q96A61 297 aa12.2□□□□□ -0.46
SNX30-203ENST00000604751 FGD5Q6ZNL6 1462 aa12.19□□□□□ -0.46
SNX30-203ENST00000604751 EEA1Q15075 1411 aa12.19□□□□□ -0.46
SNX30-203ENST00000604751 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
SNX30-203ENST00000604751 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
SNX30-203ENST00000604751 PPARGC1BQ86YN6 1023 aaKnown RBP12.18□□□□□ -0.46
SNX30-203ENST00000604751 LOC105371045A0A1W2PR82 267 aa12.18□□□□□ -0.46
SNX30-203ENST00000604751 CHGAP10645 457 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms