RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 BAZ1BQ9UIG0 1483 aaKnown RBP15.48■□□□□ 0.07
ZNF559-213ENST00000603380 RTL5Q5HYW3 569 aaPredicted RBP15.48■□□□□ 0.07
ZNF559-213ENST00000603380 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
ZNF559-213ENST00000603380 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
ZNF559-213ENST00000603380 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
ZNF559-213ENST00000603380 KANK4Q5T7N3 995 aaPredicted RBP15.45■□□□□ 0.06
ZNF559-213ENST00000603380 WASHC2AQ641Q2 1341 aa15.44■□□□□ 0.06
ZNF559-213ENST00000603380 B4GALNT3Q6L9W6 998 aa15.43■□□□□ 0.06
ZNF559-213ENST00000603380 IPO9Q96P70 1041 aaKnown RBP15.43■□□□□ 0.06
ZNF559-213ENST00000603380 HIRIP3Q9BW71 556 aaPredicted RBP15.42■□□□□ 0.06
ZNF559-213ENST00000603380 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
ZNF559-213ENST00000603380 RAB3GAP2Q9H2M9 1393 aa15.41■□□□□ 0.06
ZNF559-213ENST00000603380 C11orf95C9JLR9 678 aaPredicted RBP15.39■□□□□ 0.05
ZNF559-213ENST00000603380 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
ZNF559-213ENST00000603380 SIN3AQ96ST3 1273 aa15.37■□□□□ 0.05
ZNF559-213ENST00000603380 RANGAP1P46060 587 aaPredicted RBP15.37■□□□□ 0.05
ZNF559-213ENST00000603380 ZBTB47Q9UFB7 747 aaPredicted RBP15.36■□□□□ 0.05
ZNF559-213ENST00000603380 ANP32AP39687 249 aaKnown RBP15.36■□□□□ 0.05
ZNF559-213ENST00000603380 WASHC2CQ9Y4E1 1318 aa15.35■□□□□ 0.05
ZNF559-213ENST00000603380 ARAP1Q96P48 1450 aa15.34■□□□□ 0.05
ZNF559-213ENST00000603380 TIMELESSQ9UNS1 1208 aa15.33■□□□□ 0.05
ZNF559-213ENST00000603380 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
ZNF559-213ENST00000603380 USP35Q9P2H5 1018 aa15.28■□□□□ 0.04
ZNF559-213ENST00000603380 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
ZNF559-213ENST00000603380 SETD5Q9C0A6 1442 aa15.27■□□□□ 0.04
ZNF559-213ENST00000603380 PKNOX2Q96KN3 472 aa15.27■□□□□ 0.04
ZNF559-213ENST00000603380 BRPF3Q9ULD4 1205 aa15.25■□□□□ 0.03
ZNF559-213ENST00000603380 NEFMP07197 916 aa15.24■□□□□ 0.03
ZNF559-213ENST00000603380 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
ZNF559-213ENST00000603380 SMARCA4P51532 1647 aa15.2■□□□□ 0.02
ZNF559-213ENST00000603380 CCDC184Q52MB2 194 aa15.19■□□□□ 0.02
ZNF559-213ENST00000603380 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
ZNF559-213ENST00000603380 LAS1LQ9Y4W2 734 aaKnown RBP15.19■□□□□ 0.02
ZNF559-213ENST00000603380 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
ZNF559-213ENST00000603380 ERICH3Q5RHP9 1530 aa15.14■□□□□ 0.01
ZNF559-213ENST00000603380 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
ZNF559-213ENST00000603380 GSE1Q14687 1217 aa15.13■□□□□ 0.01
ZNF559-213ENST00000603380 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
ZNF559-213ENST00000603380 RNF123Q5XPI4 1314 aa15.12■□□□□ 0.01
ZNF559-213ENST00000603380 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
ZNF559-213ENST00000603380 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
ZNF559-213ENST00000603380 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
ZNF559-213ENST00000603380 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
ZNF559-213ENST00000603380 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
ZNF559-213ENST00000603380 NPM2Q86SE8 214 aaKnown RBP15.09■□□□□ 0.01
ZNF559-213ENST00000603380 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
ZNF559-213ENST00000603380 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
ZNF559-213ENST00000603380 NCOA2Q15596 1464 aa15.06■□□□□ 0
ZNF559-213ENST00000603380 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ -0
ZNF559-213ENST00000603380 FAM43AQ8N2R8 423 aa15.04■□□□□ -0
ZNF559-213ENST00000603380 FRAT1Q92837 279 aaPredicted RBP15.04■□□□□ -0
ZNF559-213ENST00000603380 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
ZNF559-213ENST00000603380 CNTLNQ9NXG0 1405 aa15.04■□□□□ -0
ZNF559-213ENST00000603380 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
ZNF559-213ENST00000603380 MRS2Q9HD23 443 aa15.03■□□□□ -0
ZNF559-213ENST00000603380 PHLDB1Q86UU1 1377 aa15.03■□□□□ -0
ZNF559-213ENST00000603380 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
ZNF559-213ENST00000603380 TIAM1Q13009 1591 aa15.02□□□□□ -0.01
ZNF559-213ENST00000603380 PDE4AP27815 886 aa15.01□□□□□ -0.01
ZNF559-213ENST00000603380 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
ZNF559-213ENST00000603380 BACH2Q9BYV9 841 aa15.01□□□□□ -0.01
ZNF559-213ENST00000603380 NUDCQ9Y266 331 aa15.01□□□□□ -0.01
ZNF559-213ENST00000603380 NFKBIBQ15653 356 aa15□□□□□ -0.01
ZNF559-213ENST00000603380 ZMYND15Q9H091 742 aa15□□□□□ -0.01
ZNF559-213ENST00000603380 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
ZNF559-213ENST00000603380 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
ZNF559-213ENST00000603380 FAM50AQ14320 339 aaKnown RBP14.99□□□□□ -0.01
ZNF559-213ENST00000603380 GLIPR1L2Q4G1C9 344 aa14.98□□□□□ -0.01
ZNF559-213ENST00000603380 LRRC9Q6ZRR7 1453 aa14.97□□□□□ -0.01
ZNF559-213ENST00000603380 TOP2BQ02880 1626 aa14.97□□□□□ -0.01
ZNF559-213ENST00000603380 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.02
ZNF559-213ENST00000603380 VSIG10Q8N0Z9 540 aa14.94□□□□□ -0.02
ZNF559-213ENST00000603380 MS4A1P11836 297 aa14.94□□□□□ -0.02
ZNF559-213ENST00000603380 DDRGK1Q96HY6 314 aa14.91□□□□□ -0.02
ZNF559-213ENST00000603380 NCOA1Q15788 1441 aa14.9□□□□□ -0.02
ZNF559-213ENST00000603380 CCDC7Q96M83 1385 aa14.9□□□□□ -0.02
ZNF559-213ENST00000603380 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
ZNF559-213ENST00000603380 UACAQ9BZF9 1416 aa14.89□□□□□ -0.03
ZNF559-213ENST00000603380 EIF4G2P78344 907 aaKnown RBP eCLIP14.89□□□□□ -0.03
ZNF559-213ENST00000603380 CCDC18Q5T9S5 1454 aa14.87□□□□□ -0.03
ZNF559-213ENST00000603380 BIVM-ERCC5R4GMW8 1640 aa14.87□□□□□ -0.03
ZNF559-213ENST00000603380 PLEKHG5O94827 1062 aa14.87□□□□□ -0.03
ZNF559-213ENST00000603380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.87□□□□□ -0.03
ZNF559-213ENST00000603380 RRAGDQ9NQL2 400 aaPredicted RBP14.86□□□□□ -0.03
ZNF559-213ENST00000603380 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
ZNF559-213ENST00000603380 PODXL2Q9NZ53 605 aa14.86□□□□□ -0.03
ZNF559-213ENST00000603380 SLC4A3P48751 1232 aa14.84□□□□□ -0.03
ZNF559-213ENST00000603380 FRAT2O75474 233 aaPredicted RBP14.82□□□□□ -0.04
ZNF559-213ENST00000603380 CFAP43Q8NDM7 1665 aa14.82□□□□□ -0.04
ZNF559-213ENST00000603380 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
ZNF559-213ENST00000603380 RRP1P56182 461 aaKnown RBP14.81□□□□□ -0.04
ZNF559-213ENST00000603380 HFM1A2PYH4 1435 aa14.81□□□□□ -0.04
ZNF559-213ENST00000603380 ABCA5Q8WWZ7 1642 aa14.8□□□□□ -0.04
ZNF559-213ENST00000603380 RRP9O43818 475 aaKnown RBP14.79□□□□□ -0.04
ZNF559-213ENST00000603380 HSP90AA2PQ14568 343 aaPredicted RBP14.79□□□□□ -0.04
ZNF559-213ENST00000603380 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
ZNF559-213ENST00000603380 KIF27Q86VH2 1401 aa14.77□□□□□ -0.04
ZNF559-213ENST00000603380 KIF7Q2M1P5 1343 aa14.77□□□□□ -0.04
ZNF559-213ENST00000603380 SENP3-EIF4A1A0A087X0R7 540 aa14.77□□□□□ -0.05
ZNF559-213ENST00000603380 PTPRKQ15262 1439 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms