RNA–Protein interactions for RNA: ENST00000603189.1

MRPS35P3-201, Transcript of mitochondrial ribosomal protein S35 pseudogene 3, humanhuman

BASIC

Gene MRPS35P3, Length 709 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P3-201ENST00000603189 GALR2O43603 387 aaPredicted RBP13.87□□□□□ -0.19
MRPS35P3-201ENST00000603189 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
MRPS35P3-201ENST00000603189 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
MRPS35P3-201ENST00000603189 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
MRPS35P3-201ENST00000603189 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
MRPS35P3-201ENST00000603189 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
MRPS35P3-201ENST00000603189 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
MRPS35P3-201ENST00000603189 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
MRPS35P3-201ENST00000603189 MAP3K13O43283 966 aa13.68□□□□□ -0.22
MRPS35P3-201ENST00000603189 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
MRPS35P3-201ENST00000603189 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
MRPS35P3-201ENST00000603189 ATMINO43313 823 aaPredicted RBP13.61□□□□□ -0.23
MRPS35P3-201ENST00000603189 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
MRPS35P3-201ENST00000603189 LHX8Q68G74 356 aa13.6□□□□□ -0.23
MRPS35P3-201ENST00000603189 TIE1P35590 1138 aa13.59□□□□□ -0.23
MRPS35P3-201ENST00000603189 GSE1Q14687 1217 aa13.59□□□□□ -0.23
MRPS35P3-201ENST00000603189 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
MRPS35P3-201ENST00000603189 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
MRPS35P3-201ENST00000603189 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
MRPS35P3-201ENST00000603189 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
MRPS35P3-201ENST00000603189 TRPC6Q9Y210 931 aa13.56□□□□□ -0.24
MRPS35P3-201ENST00000603189 IFNL1Q8IU54 200 aa13.53□□□□□ -0.24
MRPS35P3-201ENST00000603189 ATN1P54259 1190 aaPredicted RBP13.52□□□□□ -0.25
MRPS35P3-201ENST00000603189 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
MRPS35P3-201ENST00000603189 PYGBP11216 843 aa13.51□□□□□ -0.25
MRPS35P3-201ENST00000603189 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
MRPS35P3-201ENST00000603189 C7P10643 843 aa13.49□□□□□ -0.25
MRPS35P3-201ENST00000603189 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
MRPS35P3-201ENST00000603189 METRNQ9UJH8 293 aa13.47□□□□□ -0.25
MRPS35P3-201ENST00000603189 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
MRPS35P3-201ENST00000603189 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
MRPS35P3-201ENST00000603189 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
MRPS35P3-201ENST00000603189 IER5LQ5T953 404 aa13.38□□□□□ -0.27
MRPS35P3-201ENST00000603189 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
MRPS35P3-201ENST00000603189 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
MRPS35P3-201ENST00000603189 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
MRPS35P3-201ENST00000603189 TRIM41Q8WV44 630 aa13.36□□□□□ -0.27
MRPS35P3-201ENST00000603189 POTEFA5A3E0 1075 aa13.33□□□□□ -0.28
MRPS35P3-201ENST00000603189 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
MRPS35P3-201ENST00000603189 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
MRPS35P3-201ENST00000603189 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
MRPS35P3-201ENST00000603189 PSEN1P49768 467 aa13.24□□□□□ -0.29
MRPS35P3-201ENST00000603189 PDAP1Q13442 181 aaKnown RBP13.24□□□□□ -0.29
MRPS35P3-201ENST00000603189 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
MRPS35P3-201ENST00000603189 SEC24BO95487 1268 aa13.23□□□□□ -0.29
MRPS35P3-201ENST00000603189 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
MRPS35P3-201ENST00000603189 PLCG2P16885 1265 aa13.17□□□□□ -0.3
MRPS35P3-201ENST00000603189 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
MRPS35P3-201ENST00000603189 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
MRPS35P3-201ENST00000603189 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
MRPS35P3-201ENST00000603189 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
MRPS35P3-201ENST00000603189 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
MRPS35P3-201ENST00000603189 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
MRPS35P3-201ENST00000603189 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
MRPS35P3-201ENST00000603189 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
MRPS35P3-201ENST00000603189 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
MRPS35P3-201ENST00000603189 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
MRPS35P3-201ENST00000603189 PKD2Q13563 968 aa13.03□□□□□ -0.32
MRPS35P3-201ENST00000603189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.33
MRPS35P3-201ENST00000603189 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
MRPS35P3-201ENST00000603189 ECM2O94769 699 aaPredicted RBP12.99□□□□□ -0.33
MRPS35P3-201ENST00000603189 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
MRPS35P3-201ENST00000603189 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
MRPS35P3-201ENST00000603189 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
MRPS35P3-201ENST00000603189 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
MRPS35P3-201ENST00000603189 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
MRPS35P3-201ENST00000603189 RGL2O15211 777 aa12.9□□□□□ -0.34
MRPS35P3-201ENST00000603189 SOX12O15370 315 aa12.89□□□□□ -0.35
MRPS35P3-201ENST00000603189 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.89□□□□□ -0.35
MRPS35P3-201ENST00000603189 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
MRPS35P3-201ENST00000603189 LCE2DQ5TA82 110 aaPredicted RBP12.86□□□□□ -0.35
MRPS35P3-201ENST00000603189 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
MRPS35P3-201ENST00000603189 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
MRPS35P3-201ENST00000603189 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
MRPS35P3-201ENST00000603189 TMEM121BQ9BXQ6 578 aaPredicted RBP12.82□□□□□ -0.36
MRPS35P3-201ENST00000603189 STK25O00506 426 aa12.81□□□□□ -0.36
MRPS35P3-201ENST00000603189 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
MRPS35P3-201ENST00000603189 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
MRPS35P3-201ENST00000603189 POTEMA6NI47 508 aa12.78□□□□□ -0.36
MRPS35P3-201ENST00000603189 G3V3G9 751 aa12.78□□□□□ -0.36
MRPS35P3-201ENST00000603189 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
MRPS35P3-201ENST00000603189 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
MRPS35P3-201ENST00000603189 NLRP6P59044 892 aa12.76□□□□□ -0.37
MRPS35P3-201ENST00000603189 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
MRPS35P3-201ENST00000603189 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
MRPS35P3-201ENST00000603189 SNPHO15079 494 aa12.74□□□□□ -0.37
MRPS35P3-201ENST00000603189 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
MRPS35P3-201ENST00000603189 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
MRPS35P3-201ENST00000603189 ST18O60284 1047 aa12.69□□□□□ -0.38
MRPS35P3-201ENST00000603189 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
MRPS35P3-201ENST00000603189 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
MRPS35P3-201ENST00000603189 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
MRPS35P3-201ENST00000603189 TMEM92Q6UXU6 159 aa12.61□□□□□ -0.39
MRPS35P3-201ENST00000603189 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
MRPS35P3-201ENST00000603189 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
MRPS35P3-201ENST00000603189 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
MRPS35P3-201ENST00000603189 KIF3CO14782 793 aa12.49□□□□□ -0.41
MRPS35P3-201ENST00000603189 PPP1R37O75864 691 aa12.48□□□□□ -0.41
MRPS35P3-201ENST00000603189 NKX1-1Q15270 411 aaPredicted RBP12.47□□□□□ -0.41
MRPS35P3-201ENST00000603189 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms