RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 RIOK3O14730 519 aaKnown RBP8.95□□□□□ -0.98
AC004542.1-201ENST00000602955 SPDYE1Q8NFV5 336 aaPredicted RBP8.93□□□□□ -0.98
AC004542.1-201ENST00000602955 NKX1-1Q15270 411 aaPredicted RBP8.92□□□□□ -0.98
AC004542.1-201ENST00000602955 NBR1Q14596 966 aa8.91□□□□□ -0.98
AC004542.1-201ENST00000602955 DCAF8Q5TAQ9 597 aa8.91□□□□□ -0.98
AC004542.1-201ENST00000602955 GTPBP6O43824 516 aaPredicted RBP8.89□□□□□ -0.99
AC004542.1-201ENST00000602955 CHRM1P11229 460 aaPredicted RBP8.89□□□□□ -0.99
AC004542.1-201ENST00000602955 CACNB1Q02641 598 aaPredicted RBP8.88□□□□□ -0.99
AC004542.1-201ENST00000602955 FAM212AQ96EL1 285 aa8.88□□□□□ -0.99
AC004542.1-201ENST00000602955 VGFO15240 615 aaPredicted RBP8.87□□□□□ -0.99
AC004542.1-201ENST00000602955 AKT1S1Q96B36 256 aa8.87□□□□□ -0.99
AC004542.1-201ENST00000602955 CREBZFQ9NS37 354 aa8.87□□□□□ -0.99
AC004542.1-201ENST00000602955 MNX1P50219 401 aaPredicted RBP8.86□□□□□ -0.99
AC004542.1-201ENST00000602955 SGIP1Q9BQI5 828 aa8.85□□□□□ -0.99
AC004542.1-201ENST00000602955 RBM42Q9BTD8 480 aaKnown RBP8.85□□□□□ -0.99
AC004542.1-201ENST00000602955 STK25O00506 426 aa8.84□□□□□ -0.99
AC004542.1-201ENST00000602955 PRR29P0C7W0 189 aa8.83□□□□□ -1
AC004542.1-201ENST00000602955 RASEFQ8IZ41 740 aa8.81□□□□□ -1
AC004542.1-201ENST00000602955 RYDENQ9NUL5 291 aaKnown RBP8.8□□□□□ -1
AC004542.1-201ENST00000602955 CLEC11AQ9Y240 323 aa8.79□□□□□ -1
AC004542.1-201ENST00000602955 REM2Q8IYK8 340 aaPredicted RBP8.78□□□□□ -1
AC004542.1-201ENST00000602955 BCL11BQ9C0K0 894 aaPredicted RBP8.78□□□□□ -1
AC004542.1-201ENST00000602955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.77□□□□□ -1.01
AC004542.1-201ENST00000602955 ZFP91Q96JP5 570 aaPredicted RBP8.77□□□□□ -1.01
AC004542.1-201ENST00000602955 STK24Q9Y6E0 443 aa8.76□□□□□ -1.01
AC004542.1-201ENST00000602955 PYGBP11216 843 aa8.72□□□□□ -1.01
AC004542.1-201ENST00000602955 P3H3Q8IVL6 736 aa8.67□□□□□ -1.02
AC004542.1-201ENST00000602955 PITPNM1O00562 1244 aa8.66□□□□□ -1.02
AC004542.1-201ENST00000602955 ZNF467Q7Z7K2 595 aaPredicted RBP8.65□□□□□ -1.02
AC004542.1-201ENST00000602955 PDAP1Q13442 181 aaKnown RBP8.62□□□□□ -1.03
AC004542.1-201ENST00000602955 CADPS2Q86UW7 1296 aa8.6□□□□□ -1.03
AC004542.1-201ENST00000602955 KCNV2Q8TDN2 545 aa8.58□□□□□ -1.04
AC004542.1-201ENST00000602955 TSPYL2Q9H2G4 693 aaPredicted RBP8.58□□□□□ -1.04
AC004542.1-201ENST00000602955 WDR70Q9NW82 654 aa8.58□□□□□ -1.04
AC004542.1-201ENST00000602955 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
AC004542.1-201ENST00000602955 PSEN1P49768 467 aa8.54□□□□□ -1.04
AC004542.1-201ENST00000602955 ZNF579Q8NAF0 562 aaKnown RBP8.54□□□□□ -1.04
AC004542.1-201ENST00000602955 MFRPQ9BY79 579 aa8.54□□□□□ -1.04
AC004542.1-201ENST00000602955 PCDHB8Q9UN66 801 aa8.54□□□□□ -1.04
AC004542.1-201ENST00000602955 PCDHB13Q9Y5F0 798 aa8.54□□□□□ -1.04
AC004542.1-201ENST00000602955 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
AC004542.1-201ENST00000602955 TMEM132AQ24JP5 1023 aa8.53□□□□□ -1.04
AC004542.1-201ENST00000602955 CHADLQ6NUI6 762 aa8.53□□□□□ -1.04
AC004542.1-201ENST00000602955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.53□□□□□ -1.04
AC004542.1-201ENST00000602955 LMOD2Q6P5Q4 547 aa8.52□□□□□ -1.05
AC004542.1-201ENST00000602955 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
AC004542.1-201ENST00000602955 CCDC61Q9Y6R9 512 aa8.52□□□□□ -1.05
AC004542.1-201ENST00000602955 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
AC004542.1-201ENST00000602955 ERICH6Q7L0X2 663 aa8.5□□□□□ -1.05
AC004542.1-201ENST00000602955 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
AC004542.1-201ENST00000602955 FBXO22Q8NEZ5 403 aa8.47□□□□□ -1.05
AC004542.1-201ENST00000602955 NLRP6P59044 892 aa8.46□□□□□ -1.06
AC004542.1-201ENST00000602955 SOX12O15370 315 aa8.45□□□□□ -1.06
AC004542.1-201ENST00000602955 PPP1R37O75864 691 aa8.45□□□□□ -1.06
AC004542.1-201ENST00000602955 PRKAR2AP13861 404 aaKnown RBP8.44□□□□□ -1.06
AC004542.1-201ENST00000602955 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
AC004542.1-201ENST00000602955 E2F4Q16254 413 aa8.43□□□□□ -1.06
AC004542.1-201ENST00000602955 EFCAB3Q8N7B9 438 aa8.43□□□□□ -1.06
AC004542.1-201ENST00000602955 PAK3O75914 559 aaPredicted RBP8.42□□□□□ -1.06
AC004542.1-201ENST00000602955 KIF12Q96FN5 646 aa8.41□□□□□ -1.06
AC004542.1-201ENST00000602955 CABP2Q9NPB3 220 aa8.41□□□□□ -1.06
AC004542.1-201ENST00000602955 TESPA1A2RU30 521 aaPredicted RBP8.4□□□□□ -1.06
AC004542.1-201ENST00000602955 FXR2P51116 673 aaKnown RBP eCLIP8.4□□□□□ -1.06
AC004542.1-201ENST00000602955 PHF8Q9UPP1 1060 aa8.4□□□□□ -1.06
AC004542.1-201ENST00000602955 MAP3K13O43283 966 aa8.39□□□□□ -1.07
AC004542.1-201ENST00000602955 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
AC004542.1-201ENST00000602955 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
AC004542.1-201ENST00000602955 NCKAP5LQ9HCH0 1330 aa8.36□□□□□ -1.07
AC004542.1-201ENST00000602955 SEMA3EO15041 775 aa8.36□□□□□ -1.07
AC004542.1-201ENST00000602955 MFSD10Q14728 455 aa8.35□□□□□ -1.07
AC004542.1-201ENST00000602955 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
AC004542.1-201ENST00000602955 PDE4AP27815 886 aa8.33□□□□□ -1.08
AC004542.1-201ENST00000602955 MS4A4AQ96JQ5 239 aa8.32□□□□□ -1.08
AC004542.1-201ENST00000602955 LARP6Q9BRS8 491 aaKnown RBP8.32□□□□□ -1.08
AC004542.1-201ENST00000602955 CRISPLD2Q9H0B8 497 aa8.32□□□□□ -1.08
AC004542.1-201ENST00000602955 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
AC004542.1-201ENST00000602955 ZMYND10O75800 440 aa8.29□□□□□ -1.08
AC004542.1-201ENST00000602955 CAMK2BQ13554 666 aa8.29□□□□□ -1.08
AC004542.1-201ENST00000602955 C14orf37Q86TY3 774 aa8.29□□□□□ -1.08
AC004542.1-201ENST00000602955 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
AC004542.1-201ENST00000602955 NEUROD2Q15784 382 aa8.28□□□□□ -1.08
AC004542.1-201ENST00000602955 PIP4P2Q8N4L2 257 aa8.28□□□□□ -1.08
AC004542.1-201ENST00000602955 DDX27Q96GQ7 796 aaKnown RBP8.28□□□□□ -1.08
AC004542.1-201ENST00000602955 ARXQ96QS3 562 aa8.28□□□□□ -1.08
AC004542.1-201ENST00000602955 CHRDL2Q6WN34 429 aa8.26□□□□□ -1.09
AC004542.1-201ENST00000602955 ZRANB1Q9UGI0 708 aa8.26□□□□□ -1.09
AC004542.1-201ENST00000602955 PHF12Q96QT6 1004 aa8.25□□□□□ -1.09
AC004542.1-201ENST00000602955 GOLGA2Q08379 1002 aa8.24□□□□□ -1.09
AC004542.1-201ENST00000602955 BARGINQ6ZT62 677 aa8.24□□□□□ -1.09
AC004542.1-201ENST00000602955 TMEM106CQ9BVX2 250 aa8.24□□□□□ -1.09
AC004542.1-201ENST00000602955 CD44P16070 742 aaKnown RBP8.23□□□□□ -1.09
AC004542.1-201ENST00000602955 MKRN3Q13064 507 aaKnown RBP8.21□□□□□ -1.1
AC004542.1-201ENST00000602955 ILDR1Q86SU0 546 aaPredicted RBP8.2□□□□□ -1.1
AC004542.1-201ENST00000602955 PPP1R15BQ5SWA1 713 aa8.18□□□□□ -1.1
AC004542.1-201ENST00000602955 AK7Q96M32 723 aa8.18□□□□□ -1.1
AC004542.1-201ENST00000602955 GPHNQ9NQX3 736 aaPredicted RBP8.18□□□□□ -1.1
AC004542.1-201ENST00000602955 MS4A3Q96HJ5 214 aa8.17□□□□□ -1.1
AC004542.1-201ENST00000602955 TRPC6Q9Y210 931 aa8.17□□□□□ -1.1
AC004542.1-201ENST00000602955 MLLT3P42568 568 aaPredicted RBP8.16□□□□□ -1.1
AC004542.1-201ENST00000602955 RBM26Q5T8P6 1007 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms