RNA–Protein interactions for RNA: ENST00000602739.1

AC009108.3-201, humanhuman

BASIC

Gene AC009108.3, Length 3,515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009108.3-201ENST00000602739 ANP32AP39687 249 aaKnown RBP11.7□□□□□ -0.54
AC009108.3-201ENST00000602739 SIN3AQ96ST3 1273 aa11.7□□□□□ -0.54
AC009108.3-201ENST00000602739 ANP32CO43423 234 aa11.69□□□□□ -0.54
AC009108.3-201ENST00000602739 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
AC009108.3-201ENST00000602739 VSIG10Q8N0Z9 540 aa11.69□□□□□ -0.54
AC009108.3-201ENST00000602739 ARXQ96QS3 562 aa11.69□□□□□ -0.54
AC009108.3-201ENST00000602739 BAZ1BQ9UIG0 1483 aaKnown RBP11.68□□□□□ -0.54
AC009108.3-201ENST00000602739 CCDC88BA6NC98 1476 aa11.67□□□□□ -0.54
AC009108.3-201ENST00000602739 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.54
AC009108.3-201ENST00000602739 CUX2O14529 1486 aa11.65□□□□□ -0.54
AC009108.3-201ENST00000602739 KIF21BO75037 1637 aa11.65□□□□□ -0.54
AC009108.3-201ENST00000602739 CEP162Q5TB80 1403 aa11.64□□□□□ -0.55
AC009108.3-201ENST00000602739 PODXL2Q9NZ53 605 aa11.64□□□□□ -0.55
AC009108.3-201ENST00000602739 A0A0U1RQG5 324 aaPredicted RBP11.63□□□□□ -0.55
AC009108.3-201ENST00000602739 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
AC009108.3-201ENST00000602739 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
AC009108.3-201ENST00000602739 TNIKQ9UKE5 1360 aa11.61□□□□□ -0.55
AC009108.3-201ENST00000602739 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
AC009108.3-201ENST00000602739 EEA1Q15075 1411 aa11.58□□□□□ -0.56
AC009108.3-201ENST00000602739 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
AC009108.3-201ENST00000602739 IPO9Q96P70 1041 aaKnown RBP11.55□□□□□ -0.56
AC009108.3-201ENST00000602739 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
AC009108.3-201ENST00000602739 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
AC009108.3-201ENST00000602739 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
AC009108.3-201ENST00000602739 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
AC009108.3-201ENST00000602739 GLIPR1L2Q4G1C9 344 aa11.5□□□□□ -0.57
AC009108.3-201ENST00000602739 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
AC009108.3-201ENST00000602739 POLR3GLQ9BT43 218 aa11.49□□□□□ -0.57
AC009108.3-201ENST00000602739 NAP1L5Q96NT1 182 aaPredicted RBP11.47□□□□□ -0.57
AC009108.3-201ENST00000602739 DAXXQ9UER7 740 aaPredicted RBP11.47□□□□□ -0.57
AC009108.3-201ENST00000602739 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
AC009108.3-201ENST00000602739 NCAPD3P42695 1498 aa11.46□□□□□ -0.58
AC009108.3-201ENST00000602739 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
AC009108.3-201ENST00000602739 SOGA1O94964 1423 aa11.43□□□□□ -0.58
AC009108.3-201ENST00000602739 SKAP1Q86WV1 359 aa11.43□□□□□ -0.58
AC009108.3-201ENST00000602739 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
AC009108.3-201ENST00000602739 GOLGA3Q08378 1498 aa11.42□□□□□ -0.58
AC009108.3-201ENST00000602739 CCDC184Q52MB2 194 aa11.42□□□□□ -0.58
AC009108.3-201ENST00000602739 GSE1Q14687 1217 aa11.41□□□□□ -0.58
AC009108.3-201ENST00000602739 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
AC009108.3-201ENST00000602739 ARID3AQ99856 593 aa11.4□□□□□ -0.58
AC009108.3-201ENST00000602739 PPP1R15AO75807 674 aaPredicted RBP11.39□□□□□ -0.59
AC009108.3-201ENST00000602739 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
AC009108.3-201ENST00000602739 MRS2Q9HD23 443 aa11.38□□□□□ -0.59
AC009108.3-201ENST00000602739 KANK4Q5T7N3 995 aaPredicted RBP11.37□□□□□ -0.59
AC009108.3-201ENST00000602739 MAPKBP1O60336 1514 aa11.37□□□□□ -0.59
AC009108.3-201ENST00000602739 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
AC009108.3-201ENST00000602739 CCER2I3L3R5 266 aa11.36□□□□□ -0.59
AC009108.3-201ENST00000602739 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
AC009108.3-201ENST00000602739 HMGXB3Q12766 1538 aa11.36□□□□□ -0.59
AC009108.3-201ENST00000602739 RRBP1Q9P2E9 1410 aaKnown RBP11.36□□□□□ -0.59
AC009108.3-201ENST00000602739 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
AC009108.3-201ENST00000602739 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
AC009108.3-201ENST00000602739 NFKBIBQ15653 356 aa11.33□□□□□ -0.6
AC009108.3-201ENST00000602739 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
AC009108.3-201ENST00000602739 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
AC009108.3-201ENST00000602739 DCAF11Q8TEB1 546 aa11.31□□□□□ -0.6
AC009108.3-201ENST00000602739 CEP164Q9UPV0 1460 aa11.31□□□□□ -0.6
AC009108.3-201ENST00000602739 CLIP1P30622 1438 aa11.31□□□□□ -0.6
AC009108.3-201ENST00000602739 CADPSQ9ULU8 1353 aa11.31□□□□□ -0.6
AC009108.3-201ENST00000602739 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
AC009108.3-201ENST00000602739 FRAT2O75474 233 aaPredicted RBP11.29□□□□□ -0.6
AC009108.3-201ENST00000602739 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
AC009108.3-201ENST00000602739 AKNAQ7Z591 1439 aa11.28□□□□□ -0.6
AC009108.3-201ENST00000602739 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
AC009108.3-201ENST00000602739 CC2D2AQ9P2K1 1620 aa11.28□□□□□ -0.6
AC009108.3-201ENST00000602739 PDE4AP27815 886 aa11.28□□□□□ -0.6
AC009108.3-201ENST00000602739 BIVM-ERCC5R4GMW8 1640 aa11.27□□□□□ -0.61
AC009108.3-201ENST00000602739 AEBP2Q6ZN18 517 aaPredicted RBP11.27□□□□□ -0.61
AC009108.3-201ENST00000602739 GZF1Q9H116 711 aaPredicted RBP11.26□□□□□ -0.61
AC009108.3-201ENST00000602739 CFTRP13569 1480 aa11.26□□□□□ -0.61
AC009108.3-201ENST00000602739 POLR1AO95602 1720 aaPredicted RBP11.25□□□□□ -0.61
AC009108.3-201ENST00000602739 MAP3K1Q13233 1512 aa11.25□□□□□ -0.61
AC009108.3-201ENST00000602739 RRAGDQ9NQL2 400 aaPredicted RBP11.25□□□□□ -0.61
AC009108.3-201ENST00000602739 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
AC009108.3-201ENST00000602739 RBM10P98175 930 aaKnown RBP11.24□□□□□ -0.61
AC009108.3-201ENST00000602739 PNNQ9H307 717 aaKnown RBP11.24□□□□□ -0.61
AC009108.3-201ENST00000602739 WDR97A6NE52 1622 aa11.24□□□□□ -0.61
AC009108.3-201ENST00000602739 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
AC009108.3-201ENST00000602739 KIF27Q86VH2 1401 aa11.22□□□□□ -0.61
AC009108.3-201ENST00000602739 EXOC6Q8TAG9 804 aa11.22□□□□□ -0.61
AC009108.3-201ENST00000602739 RAB3GAP2Q9H2M9 1393 aa11.22□□□□□ -0.61
AC009108.3-201ENST00000602739 SPRYD3Q8NCJ5 442 aa11.21□□□□□ -0.62
AC009108.3-201ENST00000602739 SLKQ9H2G2 1235 aaPredicted RBP11.21□□□□□ -0.62
AC009108.3-201ENST00000602739 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
AC009108.3-201ENST00000602739 FAM43AQ8N2R8 423 aa11.2□□□□□ -0.62
AC009108.3-201ENST00000602739 TONSLQ96HA7 1378 aa11.2□□□□□ -0.62
AC009108.3-201ENST00000602739 RGS3P49796 1198 aa11.2□□□□□ -0.62
AC009108.3-201ENST00000602739 POGKQ9P215 609 aa11.19□□□□□ -0.62
AC009108.3-201ENST00000602739 CFAP43Q8NDM7 1665 aa11.19□□□□□ -0.62
AC009108.3-201ENST00000602739 ABCA5Q8WWZ7 1642 aa11.18□□□□□ -0.62
AC009108.3-201ENST00000602739 PLIN1O60240 522 aa11.18□□□□□ -0.62
AC009108.3-201ENST00000602739 DNAJC5BQ9UF47 199 aa11.18□□□□□ -0.62
AC009108.3-201ENST00000602739 KDM5BQ9UGL1 1544 aa11.17□□□□□ -0.62
AC009108.3-201ENST00000602739 ZBTB7CA1YPR0 619 aa11.16□□□□□ -0.62
AC009108.3-201ENST00000602739 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
AC009108.3-201ENST00000602739 TOP2BQ02880 1626 aa11.16□□□□□ -0.62
AC009108.3-201ENST00000602739 CUX1P39880 1505 aa11.14□□□□□ -0.63
AC009108.3-201ENST00000602739 ZNF326Q5BKZ1 582 aaKnown RBP11.14□□□□□ -0.63
AC009108.3-201ENST00000602739 HSPA5P11021 654 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms