RNA–Protein interactions for RNA: ENST00000602739.1

AC009108.3-201, humanhuman

BASIC

Gene AC009108.3, Length 3,515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009108.3-201ENST00000602739 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
AC009108.3-201ENST00000602739 PPARGC1BQ86YN6 1023 aaKnown RBP14.46□□□□□ -0.09
AC009108.3-201ENST00000602739 HRCP23327 699 aa14.27□□□□□ -0.12
AC009108.3-201ENST00000602739 PCGF6Q9BYE7 350 aa14.23□□□□□ -0.13
AC009108.3-201ENST00000602739 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.14
AC009108.3-201ENST00000602739 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
AC009108.3-201ENST00000602739 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
AC009108.3-201ENST00000602739 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.22
AC009108.3-201ENST00000602739 MYT1Q01538 1121 aa13.67□□□□□ -0.22
AC009108.3-201ENST00000602739 GTF3C3Q9Y5Q9 886 aa13.5□□□□□ -0.25
AC009108.3-201ENST00000602739 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
AC009108.3-201ENST00000602739 LOC105371045A0A1W2PR82 267 aa13.4□□□□□ -0.26
AC009108.3-201ENST00000602739 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
AC009108.3-201ENST00000602739 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
AC009108.3-201ENST00000602739 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
AC009108.3-201ENST00000602739 ACIN1Q9UKV3 1341 aaKnown RBP13.35□□□□□ -0.27
AC009108.3-201ENST00000602739 MYO15BQ96JP2 1530 aa13.34□□□□□ -0.27
AC009108.3-201ENST00000602739 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
AC009108.3-201ENST00000602739 CCDC180Q9P1Z9 1646 aa13.22□□□□□ -0.29
AC009108.3-201ENST00000602739 TRIM26Q12899 539 aaPredicted RBP13.22□□□□□ -0.29
AC009108.3-201ENST00000602739 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
AC009108.3-201ENST00000602739 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.29
AC009108.3-201ENST00000602739 DCAF1Q9Y4B6 1507 aa13.21□□□□□ -0.3
AC009108.3-201ENST00000602739 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
AC009108.3-201ENST00000602739 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
AC009108.3-201ENST00000602739 TTBK1Q5TCY1 1321 aaPredicted RBP13.06□□□□□ -0.32
AC009108.3-201ENST00000602739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.04□□□□□ -0.32
AC009108.3-201ENST00000602739 DIEXFQ68CQ4 756 aaKnown RBP13.04□□□□□ -0.32
AC009108.3-201ENST00000602739 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
AC009108.3-201ENST00000602739 PRKCSHP14314 528 aaPredicted RBP12.96□□□□□ -0.33
AC009108.3-201ENST00000602739 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
AC009108.3-201ENST00000602739 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
AC009108.3-201ENST00000602739 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
AC009108.3-201ENST00000602739 BCANQ96GW7 911 aa12.78□□□□□ -0.36
AC009108.3-201ENST00000602739 ABCC9O60706 1549 aa12.7□□□□□ -0.38
AC009108.3-201ENST00000602739 MIER1Q8N108 512 aa12.68□□□□□ -0.38
AC009108.3-201ENST00000602739 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
AC009108.3-201ENST00000602739 SUPT16HQ9Y5B9 1047 aaKnown RBP12.55□□□□□ -0.4
AC009108.3-201ENST00000602739 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
AC009108.3-201ENST00000602739 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
AC009108.3-201ENST00000602739 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
AC009108.3-201ENST00000602739 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
AC009108.3-201ENST00000602739 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
AC009108.3-201ENST00000602739 ITGAEP38570 1179 aa12.48□□□□□ -0.41
AC009108.3-201ENST00000602739 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
AC009108.3-201ENST00000602739 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
AC009108.3-201ENST00000602739 FKBP8Q14318 412 aa12.37□□□□□ -0.43
AC009108.3-201ENST00000602739 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
AC009108.3-201ENST00000602739 NACADO15069 1562 aa12.36□□□□□ -0.43
AC009108.3-201ENST00000602739 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
AC009108.3-201ENST00000602739 RBM19Q9Y4C8 960 aaKnown RBP12.33□□□□□ -0.44
AC009108.3-201ENST00000602739 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
AC009108.3-201ENST00000602739 NBR1Q14596 966 aa12.31□□□□□ -0.44
AC009108.3-201ENST00000602739 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
AC009108.3-201ENST00000602739 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
AC009108.3-201ENST00000602739 DEKP35659 375 aaKnown RBP12.25□□□□□ -0.45
AC009108.3-201ENST00000602739 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
AC009108.3-201ENST00000602739 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
AC009108.3-201ENST00000602739 MSH5O43196 834 aa12.22□□□□□ -0.45
AC009108.3-201ENST00000602739 NEFLP07196 543 aa12.22□□□□□ -0.45
AC009108.3-201ENST00000602739 EIF5BO60841 1220 aaKnown RBP12.21□□□□□ -0.45
AC009108.3-201ENST00000602739 IRX6P78412 446 aaPredicted RBP12.21□□□□□ -0.45
AC009108.3-201ENST00000602739 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
AC009108.3-201ENST00000602739 RANGAP1P46060 587 aaPredicted RBP12.17□□□□□ -0.46
AC009108.3-201ENST00000602739 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
AC009108.3-201ENST00000602739 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
AC009108.3-201ENST00000602739 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
AC009108.3-201ENST00000602739 APLP2Q06481 763 aa12.1□□□□□ -0.47
AC009108.3-201ENST00000602739 IL27Q8NEV9 243 aa12.08□□□□□ -0.48
AC009108.3-201ENST00000602739 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
AC009108.3-201ENST00000602739 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
AC009108.3-201ENST00000602739 CLSPNQ9HAW4 1339 aa12□□□□□ -0.49
AC009108.3-201ENST00000602739 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
AC009108.3-201ENST00000602739 HIRIP3Q9BW71 556 aaPredicted RBP11.99□□□□□ -0.49
AC009108.3-201ENST00000602739 RTL5Q5HYW3 569 aaPredicted RBP11.98□□□□□ -0.49
AC009108.3-201ENST00000602739 DDX10Q13206 875 aaKnown RBP11.95□□□□□ -0.5
AC009108.3-201ENST00000602739 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
AC009108.3-201ENST00000602739 TIMELESSQ9UNS1 1208 aa11.92□□□□□ -0.5
AC009108.3-201ENST00000602739 BAZ1AQ9NRL2 1556 aaPredicted RBP11.91□□□□□ -0.5
AC009108.3-201ENST00000602739 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.51
AC009108.3-201ENST00000602739 CNGB1Q14028 1251 aaPredicted RBP11.88□□□□□ -0.51
AC009108.3-201ENST00000602739 NPM2Q86SE8 214 aaKnown RBP11.87□□□□□ -0.51
AC009108.3-201ENST00000602739 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
AC009108.3-201ENST00000602739 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
AC009108.3-201ENST00000602739 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
AC009108.3-201ENST00000602739 B4GALNT3Q6L9W6 998 aa11.83□□□□□ -0.51
AC009108.3-201ENST00000602739 NOP58Q9Y2X3 529 aaKnown RBP11.83□□□□□ -0.52
AC009108.3-201ENST00000602739 LAS1LQ9Y4W2 734 aaKnown RBP11.83□□□□□ -0.52
AC009108.3-201ENST00000602739 WIZO95785 1651 aa11.81□□□□□ -0.52
AC009108.3-201ENST00000602739 PKNOX2Q96KN3 472 aa11.81□□□□□ -0.52
AC009108.3-201ENST00000602739 HNRNPUQ00839 825 aaKnown RBP eCLIP11.79□□□□□ -0.52
AC009108.3-201ENST00000602739 FANCIQ9NVI1 1328 aa11.78□□□□□ -0.52
AC009108.3-201ENST00000602739 MYT1LQ9UL68 1186 aa11.77□□□□□ -0.53
AC009108.3-201ENST00000602739 SMARCA4P51532 1647 aa11.76□□□□□ -0.53
AC009108.3-201ENST00000602739 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
AC009108.3-201ENST00000602739 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
AC009108.3-201ENST00000602739 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
AC009108.3-201ENST00000602739 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
AC009108.3-201ENST00000602739 ERICH6BQ5W0A0 696 aa11.7□□□□□ -0.54
AC009108.3-201ENST00000602739 NEFMP07197 916 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms