RNA–Protein interactions for RNA: ENST00000594617.7

PDE4C-207, Transcript of phosphodiesterase 4C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE4C, Length 4,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-207ENST00000594617 PPP4R2Q9NY27 417 aa20.82■□□□□ 0.92
PDE4C-207ENST00000594617 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
PDE4C-207ENST00000594617 RRP7BPQ9NSQ0 103 aa20.8■□□□□ 0.92
PDE4C-207ENST00000594617 TSPY4P0CV99 314 aa20.8■□□□□ 0.92
PDE4C-207ENST00000594617 TSPY10P0CW01 314 aa20.8■□□□□ 0.92
PDE4C-207ENST00000594617 WDR43Q15061 677 aaKnown RBP eCLIP20.8■□□□□ 0.92
PDE4C-207ENST00000594617 DDRGK1Q96HY6 314 aa20.79■□□□□ 0.92
PDE4C-207ENST00000594617 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
PDE4C-207ENST00000594617 HSP90AA1P07900 732 aaKnown RBP20.78■□□□□ 0.92
PDE4C-207ENST00000594617 SOGA1O94964 1423 aa20.78■□□□□ 0.92
PDE4C-207ENST00000594617 CCER2I3L3R5 266 aa20.77■□□□□ 0.92
PDE4C-207ENST00000594617 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.92
PDE4C-207ENST00000594617 GLIPR1L2Q4G1C9 344 aa20.75■□□□□ 0.91
PDE4C-207ENST00000594617 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
PDE4C-207ENST00000594617 KDM2AQ9Y2K7 1162 aa20.73■□□□□ 0.91
PDE4C-207ENST00000594617 BAZ1BQ9UIG0 1483 aaKnown RBP20.72■□□□□ 0.91
PDE4C-207ENST00000594617 BCL11AQ9H165 835 aa20.72■□□□□ 0.91
PDE4C-207ENST00000594617 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
PDE4C-207ENST00000594617 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
PDE4C-207ENST00000594617 NOP58Q9Y2X3 529 aaKnown RBP20.63■□□□□ 0.89
PDE4C-207ENST00000594617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.63■□□□□ 0.89
PDE4C-207ENST00000594617 BECN1Q14457 450 aa20.62■□□□□ 0.89
PDE4C-207ENST00000594617 RBM19Q9Y4C8 960 aaKnown RBP20.62■□□□□ 0.89
PDE4C-207ENST00000594617 ERICH6BQ5W0A0 696 aa20.62■□□□□ 0.89
PDE4C-207ENST00000594617 SETD5Q9C0A6 1442 aa20.6■□□□□ 0.89
PDE4C-207ENST00000594617 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
PDE4C-207ENST00000594617 CHGAP10645 457 aaKnown RBP20.58■□□□□ 0.89
PDE4C-207ENST00000594617 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
PDE4C-207ENST00000594617 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
PDE4C-207ENST00000594617 B4GALNT3Q6L9W6 998 aa20.54■□□□□ 0.88
PDE4C-207ENST00000594617 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
PDE4C-207ENST00000594617 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
PDE4C-207ENST00000594617 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
PDE4C-207ENST00000594617 CDCA8Q53HL2 280 aa20.5■□□□□ 0.87
PDE4C-207ENST00000594617 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
PDE4C-207ENST00000594617 CFDP1Q9UEE9 299 aaPredicted RBP20.48■□□□□ 0.87
PDE4C-207ENST00000594617 PLEKHD1A6NEE1 506 aa20.48■□□□□ 0.87
PDE4C-207ENST00000594617 ARXQ96QS3 562 aa20.47■□□□□ 0.87
PDE4C-207ENST00000594617 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
PDE4C-207ENST00000594617 RAB3GAP2Q9H2M9 1393 aa20.46■□□□□ 0.87
PDE4C-207ENST00000594617 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
PDE4C-207ENST00000594617 KNSTRNQ9Y448 316 aa20.45■□□□□ 0.86
PDE4C-207ENST00000594617 RGL3Q3MIN7 710 aa20.41■□□□□ 0.86
PDE4C-207ENST00000594617 PPP1R15AO75807 674 aaPredicted RBP20.41■□□□□ 0.86
PDE4C-207ENST00000594617 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
PDE4C-207ENST00000594617 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
PDE4C-207ENST00000594617 MYH16Q9H6N6 1097 aa20.4■□□□□ 0.86
PDE4C-207ENST00000594617 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
PDE4C-207ENST00000594617 DEKP35659 375 aaKnown RBP20.39■□□□□ 0.85
PDE4C-207ENST00000594617 SENP3-EIF4A1A0A087X0R7 540 aa20.39■□□□□ 0.85
PDE4C-207ENST00000594617 TRIM44Q96DX7 344 aaPredicted RBP20.39■□□□□ 0.85
PDE4C-207ENST00000594617 CUX2O14529 1486 aa20.39■□□□□ 0.85
PDE4C-207ENST00000594617 STAG3Q9UJ98 1225 aa20.38■□□□□ 0.85
PDE4C-207ENST00000594617 GOLGA6L22H0YM25 854 aa20.36■□□□□ 0.85
PDE4C-207ENST00000594617 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
PDE4C-207ENST00000594617 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
PDE4C-207ENST00000594617 DHX57Q6P158 1386 aaKnown RBP20.33■□□□□ 0.85
PDE4C-207ENST00000594617 NPM1P06748 294 aaKnown RBP eCLIP20.31■□□□□ 0.84
PDE4C-207ENST00000594617 RGS3P49796 1198 aa20.3■□□□□ 0.84
PDE4C-207ENST00000594617 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
PDE4C-207ENST00000594617 WIZO95785 1651 aa20.26■□□□□ 0.83
PDE4C-207ENST00000594617 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
PDE4C-207ENST00000594617 FTSJ3Q8IY81 847 aaKnown RBP20.24■□□□□ 0.83
PDE4C-207ENST00000594617 TMF1P82094 1093 aa20.23■□□□□ 0.83
PDE4C-207ENST00000594617 RTN4Q9NQC3 1192 aaKnown RBP20.23■□□□□ 0.83
PDE4C-207ENST00000594617 FMN1Q68DA7 1419 aa20.22■□□□□ 0.83
PDE4C-207ENST00000594617 MS4A1P11836 297 aa20.21■□□□□ 0.83
PDE4C-207ENST00000594617 CC2D1BQ5T0F9 858 aaKnown RBP20.21■□□□□ 0.83
PDE4C-207ENST00000594617 DCAF11Q8TEB1 546 aa20.21■□□□□ 0.83
PDE4C-207ENST00000594617 NCLP19338 710 aaKnown RBP20.2■□□□□ 0.82
PDE4C-207ENST00000594617 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
PDE4C-207ENST00000594617 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
PDE4C-207ENST00000594617 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
PDE4C-207ENST00000594617 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
PDE4C-207ENST00000594617 RALBP1Q15311 655 aa20.18■□□□□ 0.82
PDE4C-207ENST00000594617 RCAN3Q9UKA8 241 aa20.18■□□□□ 0.82
PDE4C-207ENST00000594617 IPO9Q96P70 1041 aaKnown RBP20.16■□□□□ 0.82
PDE4C-207ENST00000594617 KTN1Q86UP2 1357 aaKnown RBP20.16■□□□□ 0.82
PDE4C-207ENST00000594617 FRAT1Q92837 279 aaPredicted RBP20.16■□□□□ 0.82
PDE4C-207ENST00000594617 CHMP4BQ9H444 224 aaKnown RBP20.16■□□□□ 0.82
PDE4C-207ENST00000594617 KCNH8Q96L42 1107 aa20.15■□□□□ 0.82
PDE4C-207ENST00000594617 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
PDE4C-207ENST00000594617 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
PDE4C-207ENST00000594617 MAPK8IP3Q9UPT6 1336 aa20.12■□□□□ 0.81
PDE4C-207ENST00000594617 PKD2Q13563 968 aa20.12■□□□□ 0.81
PDE4C-207ENST00000594617 NAP1L5Q96NT1 182 aaPredicted RBP20.12■□□□□ 0.81
PDE4C-207ENST00000594617 CASC1Q6TDU7 716 aa20.11■□□□□ 0.81
PDE4C-207ENST00000594617 L3MBTL2Q969R5 705 aa20.1■□□□□ 0.81
PDE4C-207ENST00000594617 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
PDE4C-207ENST00000594617 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
PDE4C-207ENST00000594617 FOXD1Q16676 465 aa20.08■□□□□ 0.8
PDE4C-207ENST00000594617 FANCIQ9NVI1 1328 aa20.07■□□□□ 0.8
PDE4C-207ENST00000594617 ROCK2O75116 1388 aaKnown RBP20.06■□□□□ 0.8
PDE4C-207ENST00000594617 PTMAP06454 111 aaKnown RBP20.06■□□□□ 0.8
PDE4C-207ENST00000594617 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
PDE4C-207ENST00000594617 HSP90AB1P08238 724 aaKnown RBP20.04■□□□□ 0.8
PDE4C-207ENST00000594617 HSCBQ8IWL3 235 aa20.04■□□□□ 0.8
PDE4C-207ENST00000594617 NLRP13Q86W25 1043 aa20.02■□□□□ 0.8
PDE4C-207ENST00000594617 PNNQ9H307 717 aaKnown RBP20.01■□□□□ 0.79
PDE4C-207ENST00000594617 USP35Q9P2H5 1018 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms