RNA–Protein interactions for RNA: ENST00000594617.7

PDE4C-207, Transcript of phosphodiesterase 4C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE4C, Length 4,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-207ENST00000594617 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
PDE4C-207ENST00000594617 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
PDE4C-207ENST00000594617 SUPT5HO00267 1087 aaKnown RBP25.76■■□□□ 1.71
PDE4C-207ENST00000594617 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
PDE4C-207ENST00000594617 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
PDE4C-207ENST00000594617 PELP1Q8IZL8 1130 aaKnown RBP24.48■■□□□ 1.51
PDE4C-207ENST00000594617 EHMT2Q96KQ7 1210 aa24.42■■□□□ 1.5
PDE4C-207ENST00000594617 ZEB1P37275 1124 aaPredicted RBP24.33■■□□□ 1.49
PDE4C-207ENST00000594617 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.45
PDE4C-207ENST00000594617 APLP2Q06481 763 aa24.13■■□□□ 1.45
PDE4C-207ENST00000594617 CENPBP07199 599 aaPredicted RBP24.07■■□□□ 1.44
PDE4C-207ENST00000594617 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
PDE4C-207ENST00000594617 HRCP23327 699 aa23.9■■□□□ 1.42
PDE4C-207ENST00000594617 CCER1Q8TC90 406 aaPredicted RBP23.85■■□□□ 1.41
PDE4C-207ENST00000594617 TRIM26Q12899 539 aaPredicted RBP23.73■■□□□ 1.39
PDE4C-207ENST00000594617 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
PDE4C-207ENST00000594617 MYT1Q01538 1121 aa23.72■■□□□ 1.39
PDE4C-207ENST00000594617 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
PDE4C-207ENST00000594617 UBTFP17480 764 aaKnown RBP23.41■■□□□ 1.34
PDE4C-207ENST00000594617 LOC105371045A0A1W2PR82 267 aa23.3■■□□□ 1.32
PDE4C-207ENST00000594617 ERICH6Q7L0X2 663 aa23.29■■□□□ 1.32
PDE4C-207ENST00000594617 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
PDE4C-207ENST00000594617 RANGAP1P46060 587 aaPredicted RBP23.24■■□□□ 1.31
PDE4C-207ENST00000594617 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
PDE4C-207ENST00000594617 NEFLP07196 543 aa23.18■■□□□ 1.3
PDE4C-207ENST00000594617 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
PDE4C-207ENST00000594617 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
PDE4C-207ENST00000594617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
PDE4C-207ENST00000594617 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
PDE4C-207ENST00000594617 ITGAEP38570 1179 aa22.55■■□□□ 1.2
PDE4C-207ENST00000594617 GTF3C3Q9Y5Q9 886 aa22.52■■□□□ 1.2
PDE4C-207ENST00000594617 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
PDE4C-207ENST00000594617 ACIN1Q9UKV3 1341 aaKnown RBP22.4■■□□□ 1.18
PDE4C-207ENST00000594617 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
PDE4C-207ENST00000594617 DAXXQ9UER7 740 aaPredicted RBP22.23■■□□□ 1.15
PDE4C-207ENST00000594617 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
PDE4C-207ENST00000594617 POLR3GLQ9BT43 218 aa22.15■■□□□ 1.14
PDE4C-207ENST00000594617 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
PDE4C-207ENST00000594617 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
PDE4C-207ENST00000594617 RTL5Q5HYW3 569 aaPredicted RBP22.06■■□□□ 1.12
PDE4C-207ENST00000594617 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
PDE4C-207ENST00000594617 ANP32CO43423 234 aa22.04■■□□□ 1.12
PDE4C-207ENST00000594617 BCANQ96GW7 911 aa21.99■■□□□ 1.11
PDE4C-207ENST00000594617 NEUROD1Q13562 356 aa21.99■■□□□ 1.11
PDE4C-207ENST00000594617 ABCC9O60706 1549 aa21.95■■□□□ 1.1
PDE4C-207ENST00000594617 CDK11AQ9UQ88 783 aaPredicted RBP21.94■■□□□ 1.1
PDE4C-207ENST00000594617 CNGB1Q14028 1251 aaPredicted RBP21.92■■□□□ 1.1
PDE4C-207ENST00000594617 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
PDE4C-207ENST00000594617 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
PDE4C-207ENST00000594617 MYO15BQ96JP2 1530 aa21.84■■□□□ 1.09
PDE4C-207ENST00000594617 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
PDE4C-207ENST00000594617 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
PDE4C-207ENST00000594617 MYT1LQ9UL68 1186 aa21.65■■□□□ 1.06
PDE4C-207ENST00000594617 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
PDE4C-207ENST00000594617 FKBP8Q14318 412 aa21.61■■□□□ 1.05
PDE4C-207ENST00000594617 MIER1Q8N108 512 aa21.55■■□□□ 1.04
PDE4C-207ENST00000594617 ANP32AP39687 249 aaKnown RBP21.53■■□□□ 1.04
PDE4C-207ENST00000594617 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
PDE4C-207ENST00000594617 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
PDE4C-207ENST00000594617 DDX10Q13206 875 aaKnown RBP21.48■■□□□ 1.03
PDE4C-207ENST00000594617 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
PDE4C-207ENST00000594617 EEA1Q15075 1411 aa21.45■■□□□ 1.02
PDE4C-207ENST00000594617 P3H3Q8IVL6 736 aa21.44■■□□□ 1.02
PDE4C-207ENST00000594617 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
PDE4C-207ENST00000594617 HNRNPUQ00839 825 aaKnown RBP eCLIP21.42■■□□□ 1.02
PDE4C-207ENST00000594617 CLIP1P30622 1438 aa21.39■■□□□ 1.01
PDE4C-207ENST00000594617 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
PDE4C-207ENST00000594617 GOLGA3Q08378 1498 aa21.3■■□□□ 1
PDE4C-207ENST00000594617 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
PDE4C-207ENST00000594617 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
PDE4C-207ENST00000594617 NPM2Q86SE8 214 aaKnown RBP21.21■□□□□ 0.99
PDE4C-207ENST00000594617 CANXP27824 592 aaKnown RBP21.2■□□□□ 0.99
PDE4C-207ENST00000594617 CCDC136Q96JN2 1154 aa21.16■□□□□ 0.98
PDE4C-207ENST00000594617 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
PDE4C-207ENST00000594617 ZBTB47Q9UFB7 747 aaPredicted RBP21.13■□□□□ 0.97
PDE4C-207ENST00000594617 MRS2Q9HD23 443 aa21.12■□□□□ 0.97
PDE4C-207ENST00000594617 ANP32EQ9BTT0 268 aa21.12■□□□□ 0.97
PDE4C-207ENST00000594617 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
PDE4C-207ENST00000594617 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
PDE4C-207ENST00000594617 TMC1Q8TDI8 760 aa21.08■□□□□ 0.96
PDE4C-207ENST00000594617 ZNF777Q9ULD5 760 aaPredicted RBP21.08■□□□□ 0.96
PDE4C-207ENST00000594617 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.96
PDE4C-207ENST00000594617 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
PDE4C-207ENST00000594617 MTUS2Q5JR59 1369 aa21.05■□□□□ 0.96
PDE4C-207ENST00000594617 FBLN2P98095 1184 aa21.04■□□□□ 0.96
PDE4C-207ENST00000594617 HIRIP3Q9BW71 556 aaPredicted RBP21■□□□□ 0.95
PDE4C-207ENST00000594617 CHIC2Q9UKJ5 165 aa21■□□□□ 0.95
PDE4C-207ENST00000594617 NBR1Q14596 966 aa20.99■□□□□ 0.95
PDE4C-207ENST00000594617 NEFMP07197 916 aa20.98■□□□□ 0.95
PDE4C-207ENST00000594617 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
PDE4C-207ENST00000594617 IRX6P78412 446 aaPredicted RBP20.98■□□□□ 0.95
PDE4C-207ENST00000594617 UPF2Q9HAU5 1272 aaKnown RBP20.97■□□□□ 0.95
PDE4C-207ENST00000594617 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.95■□□□□ 0.94
PDE4C-207ENST00000594617 NACADO15069 1562 aa20.93■□□□□ 0.94
PDE4C-207ENST00000594617 EIF5BO60841 1220 aaKnown RBP20.92■□□□□ 0.94
PDE4C-207ENST00000594617 SALL2Q9Y467 1007 aaPredicted RBP20.89■□□□□ 0.94
PDE4C-207ENST00000594617 TIMELESSQ9UNS1 1208 aa20.87■□□□□ 0.93
PDE4C-207ENST00000594617 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
PDE4C-207ENST00000594617 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
PDE4C-207ENST00000594617 ANP32BQ92688 251 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms