RNA–Protein interactions for RNA: ENST00000592287.5

TNPO2-218, Transcript of transportin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNPO2, Length 2,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-218ENST00000592287 FKBP8Q14318 412 aa19.02■□□□□ 0.64
TNPO2-218ENST00000592287 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
TNPO2-218ENST00000592287 TNIKQ9UKE5 1360 aa19.01■□□□□ 0.63
TNPO2-218ENST00000592287 GOLGA3Q08378 1498 aa19■□□□□ 0.63
TNPO2-218ENST00000592287 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
TNPO2-218ENST00000592287 AMER1Q5JTC6 1135 aaPredicted RBP18.98■□□□□ 0.63
TNPO2-218ENST00000592287 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
TNPO2-218ENST00000592287 ITGAEP38570 1179 aa18.97■□□□□ 0.63
TNPO2-218ENST00000592287 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
TNPO2-218ENST00000592287 NESP48681 1621 aa18.95■□□□□ 0.62
TNPO2-218ENST00000592287 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
TNPO2-218ENST00000592287 KIF21BO75037 1637 aa18.92■□□□□ 0.62
TNPO2-218ENST00000592287 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
TNPO2-218ENST00000592287 NBR1Q14596 966 aa18.9■□□□□ 0.62
TNPO2-218ENST00000592287 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
TNPO2-218ENST00000592287 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
TNPO2-218ENST00000592287 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.61
TNPO2-218ENST00000592287 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
TNPO2-218ENST00000592287 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
TNPO2-218ENST00000592287 CUX2O14529 1486 aa18.79■□□□□ 0.6
TNPO2-218ENST00000592287 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
TNPO2-218ENST00000592287 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
TNPO2-218ENST00000592287 NEFLP07196 543 aa18.77■□□□□ 0.6
TNPO2-218ENST00000592287 CLIP1P30622 1438 aa18.76■□□□□ 0.59
TNPO2-218ENST00000592287 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
TNPO2-218ENST00000592287 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
TNPO2-218ENST00000592287 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
TNPO2-218ENST00000592287 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
TNPO2-218ENST00000592287 IGF1RP08069 1367 aa18.7■□□□□ 0.58
TNPO2-218ENST00000592287 RAD54L2Q9Y4B4 1467 aa18.7■□□□□ 0.58
TNPO2-218ENST00000592287 TULP1O00294 542 aaPredicted RBP18.69■□□□□ 0.58
TNPO2-218ENST00000592287 ARXQ96QS3 562 aa18.68■□□□□ 0.58
TNPO2-218ENST00000592287 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
TNPO2-218ENST00000592287 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
TNPO2-218ENST00000592287 CDK11AQ9UQ88 783 aaPredicted RBP18.66■□□□□ 0.58
TNPO2-218ENST00000592287 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.57
TNPO2-218ENST00000592287 ERCC6Q03468 1493 aa18.63■□□□□ 0.57
TNPO2-218ENST00000592287 ZMYND15Q9H091 742 aa18.63■□□□□ 0.57
TNPO2-218ENST00000592287 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
TNPO2-218ENST00000592287 CARMIL1Q5VZK9 1371 aa18.61■□□□□ 0.57
TNPO2-218ENST00000592287 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
TNPO2-218ENST00000592287 NOP58Q9Y2X3 529 aaKnown RBP18.61■□□□□ 0.57
TNPO2-218ENST00000592287 VPS8Q8N3P4 1428 aa18.6■□□□□ 0.57
TNPO2-218ENST00000592287 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
TNPO2-218ENST00000592287 VSIG10Q8N0Z9 540 aa18.57■□□□□ 0.56
TNPO2-218ENST00000592287 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
TNPO2-218ENST00000592287 KLHL34Q8N239 644 aa18.56■□□□□ 0.56
TNPO2-218ENST00000592287 GLIPR1L2Q4G1C9 344 aa18.55■□□□□ 0.56
TNPO2-218ENST00000592287 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
TNPO2-218ENST00000592287 WDR62O43379 1518 aa18.52■□□□□ 0.56
TNPO2-218ENST00000592287 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
TNPO2-218ENST00000592287 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
TNPO2-218ENST00000592287 A0A0U1RQG5 324 aaPredicted RBP18.5■□□□□ 0.55
TNPO2-218ENST00000592287 ARHGAP35Q9NRY4 1499 aa18.46■□□□□ 0.55
TNPO2-218ENST00000592287 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
TNPO2-218ENST00000592287 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
TNPO2-218ENST00000592287 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
TNPO2-218ENST00000592287 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
TNPO2-218ENST00000592287 BRPF3Q9ULD4 1205 aa18.4■□□□□ 0.54
TNPO2-218ENST00000592287 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
TNPO2-218ENST00000592287 CUL7Q14999 1698 aa18.39■□□□□ 0.53
TNPO2-218ENST00000592287 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
TNPO2-218ENST00000592287 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
TNPO2-218ENST00000592287 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
TNPO2-218ENST00000592287 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
TNPO2-218ENST00000592287 PDE4CQ08493 712 aa18.36■□□□□ 0.53
TNPO2-218ENST00000592287 IRX6P78412 446 aaPredicted RBP18.35■□□□□ 0.53
TNPO2-218ENST00000592287 KANK4Q5T7N3 995 aaPredicted RBP18.35■□□□□ 0.53
TNPO2-218ENST00000592287 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.523e-7■■■■□ 22.8
TNPO2-218ENST00000592287 TRIM52Q96A61 297 aa18.33■□□□□ 0.52
TNPO2-218ENST00000592287 FGD1P98174 961 aa18.29■□□□□ 0.52
TNPO2-218ENST00000592287 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
TNPO2-218ENST00000592287 RBM10P98175 930 aaKnown RBP18.29■□□□□ 0.52
TNPO2-218ENST00000592287 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
TNPO2-218ENST00000592287 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
TNPO2-218ENST00000592287 TPRNQ4KMQ1 711 aa18.26■□□□□ 0.51
TNPO2-218ENST00000592287 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
TNPO2-218ENST00000592287 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
TNPO2-218ENST00000592287 AAMPQ13685 434 aa18.25■□□□□ 0.51
TNPO2-218ENST00000592287 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
TNPO2-218ENST00000592287 WASHC2CQ9Y4E1 1318 aa18.24■□□□□ 0.51
TNPO2-218ENST00000592287 ATP1B4Q9UN42 357 aaPredicted RBP18.23■□□□□ 0.51
TNPO2-218ENST00000592287 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
TNPO2-218ENST00000592287 PBRM1Q86U86 1689 aa18.23■□□□□ 0.51
TNPO2-218ENST00000592287 NEFMP07197 916 aa18.22■□□□□ 0.51
TNPO2-218ENST00000592287 PDIA4P13667 645 aaKnown RBP18.21■□□□□ 0.51
TNPO2-218ENST00000592287 IPO9Q96P70 1041 aaKnown RBP18.2■□□□□ 0.5
TNPO2-218ENST00000592287 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
TNPO2-218ENST00000592287 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
TNPO2-218ENST00000592287 ANP32AP39687 249 aaKnown RBP18.19■□□□□ 0.5
TNPO2-218ENST00000592287 EFCAB5A4FU69 1503 aa18.18■□□□□ 0.5
TNPO2-218ENST00000592287 BCL11BQ9C0K0 894 aaPredicted RBP18.17■□□□□ 0.5
TNPO2-218ENST00000592287 HOMEZQ8IX15 550 aa18.17■□□□□ 0.5
TNPO2-218ENST00000592287 PCF11O94913 1555 aaKnown RBP18.16■□□□□ 0.5
TNPO2-218ENST00000592287 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
TNPO2-218ENST00000592287 TIAM1Q13009 1591 aa18.15■□□□□ 0.5
TNPO2-218ENST00000592287 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
TNPO2-218ENST00000592287 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
TNPO2-218ENST00000592287 MAP3K1Q13233 1512 aa18.11■□□□□ 0.49
TNPO2-218ENST00000592287 LRRC9Q6ZRR7 1453 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms