RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
PDE4A-207ENST00000590407 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDE4A-207ENST00000590407 EFCAB5A4FU69 1503 aa17.96■□□□□ 0.47
PDE4A-207ENST00000590407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDE4A-207ENST00000590407 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
PDE4A-207ENST00000590407 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
PDE4A-207ENST00000590407 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
PDE4A-207ENST00000590407 FYCO1Q9BQS8 1478 aa17.91■□□□□ 0.46
PDE4A-207ENST00000590407 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
PDE4A-207ENST00000590407 TIMELESSQ9UNS1 1208 aa17.91■□□□□ 0.46
PDE4A-207ENST00000590407 PHLDB1Q86UU1 1377 aa17.9■□□□□ 0.46
PDE4A-207ENST00000590407 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
PDE4A-207ENST00000590407 CUL7Q14999 1698 aa17.9■□□□□ 0.46
PDE4A-207ENST00000590407 CASKIN1Q8WXD9 1431 aa17.87■□□□□ 0.45
PDE4A-207ENST00000590407 TOPBP1Q92547 1522 aa17.83■□□□□ 0.44
PDE4A-207ENST00000590407 CTTNBP2Q8WZ74 1663 aa17.82■□□□□ 0.44
PDE4A-207ENST00000590407 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
PDE4A-207ENST00000590407 ITGAEP38570 1179 aa17.79■□□□□ 0.44
PDE4A-207ENST00000590407 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
PDE4A-207ENST00000590407 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
PDE4A-207ENST00000590407 FHOD3Q2V2M9 1422 aa17.76■□□□□ 0.43
PDE4A-207ENST00000590407 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
PDE4A-207ENST00000590407 SUPT16HQ9Y5B9 1047 aaKnown RBP17.75■□□□□ 0.43
PDE4A-207ENST00000590407 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
PDE4A-207ENST00000590407 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
PDE4A-207ENST00000590407 SAMD9Q5K651 1589 aa17.72■□□□□ 0.43
PDE4A-207ENST00000590407 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
PDE4A-207ENST00000590407 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
PDE4A-207ENST00000590407 LAMC3Q9Y6N6 1575 aa17.71■□□□□ 0.43
PDE4A-207ENST00000590407 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
PDE4A-207ENST00000590407 HFM1A2PYH4 1435 aa17.68■□□□□ 0.42
PDE4A-207ENST00000590407 PPP1R15AO75807 674 aaPredicted RBP17.67■□□□□ 0.42
PDE4A-207ENST00000590407 KIF21AQ7Z4S6 1674 aa17.66■□□□□ 0.42
PDE4A-207ENST00000590407 SIN3AQ96ST3 1273 aa17.65■□□□□ 0.42
PDE4A-207ENST00000590407 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
PDE4A-207ENST00000590407 UACAQ9BZF9 1416 aa17.64■□□□□ 0.41
PDE4A-207ENST00000590407 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
PDE4A-207ENST00000590407 URB2Q14146 1524 aaKnown RBP17.63■□□□□ 0.41
PDE4A-207ENST00000590407 CCDC18Q5T9S5 1454 aa17.63■□□□□ 0.41
PDE4A-207ENST00000590407 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
PDE4A-207ENST00000590407 PTPN23Q9H3S7 1636 aa17.62■□□□□ 0.41
PDE4A-207ENST00000590407 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
PDE4A-207ENST00000590407 MYOM3Q5VTT5 1437 aa17.61■□□□□ 0.41
PDE4A-207ENST00000590407 NESP48681 1621 aa17.61■□□□□ 0.41
PDE4A-207ENST00000590407 MTUS2Q5JR59 1369 aa17.6■□□□□ 0.41
PDE4A-207ENST00000590407 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
PDE4A-207ENST00000590407 SUPT6HQ7KZ85 1726 aaKnown RBP17.59■□□□□ 0.41
PDE4A-207ENST00000590407 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.41
PDE4A-207ENST00000590407 NCOA2Q15596 1464 aa17.58■□□□□ 0.41
PDE4A-207ENST00000590407 LRRIQ1Q96JM4 1722 aa17.58■□□□□ 0.41
PDE4A-207ENST00000590407 NAIPQ13075 1403 aa17.57■□□□□ 0.4
PDE4A-207ENST00000590407 PTPRKQ15262 1439 aa17.57■□□□□ 0.4
PDE4A-207ENST00000590407 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
PDE4A-207ENST00000590407 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
PDE4A-207ENST00000590407 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
PDE4A-207ENST00000590407 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
PDE4A-207ENST00000590407 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
PDE4A-207ENST00000590407 TONSLQ96HA7 1378 aa17.54■□□□□ 0.4
PDE4A-207ENST00000590407 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
PDE4A-207ENST00000590407 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
PDE4A-207ENST00000590407 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
PDE4A-207ENST00000590407 GCC2Q8IWJ2 1684 aa17.5■□□□□ 0.39
PDE4A-207ENST00000590407 ANP32CO43423 234 aa17.49■□□□□ 0.39
PDE4A-207ENST00000590407 TARBP1Q13395 1621 aaKnown RBP17.49■□□□□ 0.39
PDE4A-207ENST00000590407 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
PDE4A-207ENST00000590407 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
PDE4A-207ENST00000590407 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
PDE4A-207ENST00000590407 MIA2Q96PC5 1412 aa17.46■□□□□ 0.38
PDE4A-207ENST00000590407 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
PDE4A-207ENST00000590407 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
PDE4A-207ENST00000590407 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
PDE4A-207ENST00000590407 EPRSP07814 1512 aaKnown RBP17.39■□□□□ 0.37
PDE4A-207ENST00000590407 ADAMTS12P58397 1594 aa17.39■□□□□ 0.37
PDE4A-207ENST00000590407 DENND4BO75064 1496 aaPredicted RBP17.38■□□□□ 0.37
PDE4A-207ENST00000590407 WDR62O43379 1518 aa17.37■□□□□ 0.37
PDE4A-207ENST00000590407 NEFLP07196 543 aa17.36■□□□□ 0.37
PDE4A-207ENST00000590407 FKBP8Q14318 412 aa17.35■□□□□ 0.37
PDE4A-207ENST00000590407 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
PDE4A-207ENST00000590407 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
PDE4A-207ENST00000590407 KDM6BO15054 1643 aa17.28■□□□□ 0.36
PDE4A-207ENST00000590407 DNMT1P26358 1616 aaKnown RBP17.26■□□□□ 0.35
PDE4A-207ENST00000590407 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
PDE4A-207ENST00000590407 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
PDE4A-207ENST00000590407 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
PDE4A-207ENST00000590407 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
PDE4A-207ENST00000590407 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
PDE4A-207ENST00000590407 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
PDE4A-207ENST00000590407 MPHOSPH9Q99550 1183 aa17.25■□□□□ 0.35
PDE4A-207ENST00000590407 CNTLNQ9NXG0 1405 aa17.25■□□□□ 0.35
PDE4A-207ENST00000590407 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDE4A-207ENST00000590407 NCOA1Q15788 1441 aa17.24■□□□□ 0.35
PDE4A-207ENST00000590407 RPRD2Q5VT52 1461 aaKnown RBP17.24■□□□□ 0.35
PDE4A-207ENST00000590407 DAPK1P53355 1430 aa17.24■□□□□ 0.35
PDE4A-207ENST00000590407 ANKRD30BQ9BXX2 1392 aa17.23■□□□□ 0.35
PDE4A-207ENST00000590407 KIAA0586Q9BVV6 1533 aa17.23■□□□□ 0.35
PDE4A-207ENST00000590407 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
PDE4A-207ENST00000590407 KIAA0556O60303 1618 aa17.22■□□□□ 0.35
PDE4A-207ENST00000590407 ANP32EQ9BTT0 268 aa17.22■□□□□ 0.35
PDE4A-207ENST00000590407 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
PDE4A-207ENST00000590407 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms