RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
GPATCH8-206ENST00000588554 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
GPATCH8-206ENST00000588554 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
GPATCH8-206ENST00000588554 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
GPATCH8-206ENST00000588554 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
GPATCH8-206ENST00000588554 FBLN2P98095 1184 aa13.72□□□□□ -0.21
GPATCH8-206ENST00000588554 POLA2Q14181 598 aa13.72□□□□□ -0.21
GPATCH8-206ENST00000588554 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.21
GPATCH8-206ENST00000588554 RIMBP3CA6NJZ7 1639 aa13.71□□□□□ -0.22
GPATCH8-206ENST00000588554 RIMBP3BA6NNM3 1639 aa13.71□□□□□ -0.22
GPATCH8-206ENST00000588554 RIMBP3Q9UFD9 1639 aa13.71□□□□□ -0.22
GPATCH8-206ENST00000588554 SOGA1O94964 1423 aa13.7□□□□□ -0.22
GPATCH8-206ENST00000588554 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
GPATCH8-206ENST00000588554 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
GPATCH8-206ENST00000588554 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
GPATCH8-206ENST00000588554 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
GPATCH8-206ENST00000588554 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
GPATCH8-206ENST00000588554 CUX1P39880 1505 aa13.65□□□□□ -0.22
GPATCH8-206ENST00000588554 CHD1O14646 1710 aa13.65□□□□□ -0.22
GPATCH8-206ENST00000588554 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
GPATCH8-206ENST00000588554 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
GPATCH8-206ENST00000588554 ARAP1Q96P48 1450 aa13.54□□□□□ -0.24
GPATCH8-206ENST00000588554 GRIN2BQ13224 1484 aa13.53□□□□□ -0.24
GPATCH8-206ENST00000588554 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
GPATCH8-206ENST00000588554 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
GPATCH8-206ENST00000588554 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
GPATCH8-206ENST00000588554 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
GPATCH8-206ENST00000588554 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
GPATCH8-206ENST00000588554 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
GPATCH8-206ENST00000588554 ABCA10Q8WWZ4 1543 aa13.46□□□□□ -0.25
GPATCH8-206ENST00000588554 PBRM1Q86U86 1689 aa13.46□□□□□ -0.26
GPATCH8-206ENST00000588554 SYNJ1O43426 1573 aa13.45□□□□□ -0.26
GPATCH8-206ENST00000588554 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
GPATCH8-206ENST00000588554 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
GPATCH8-206ENST00000588554 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
GPATCH8-206ENST00000588554 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
GPATCH8-206ENST00000588554 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
GPATCH8-206ENST00000588554 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
GPATCH8-206ENST00000588554 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
GPATCH8-206ENST00000588554 CEP170Q5SW79 1584 aa13.34□□□□□ -0.27
GPATCH8-206ENST00000588554 ADAMTS12P58397 1594 aa13.33□□□□□ -0.28
GPATCH8-206ENST00000588554 FHAD1B1AJZ9 1412 aa13.31□□□□□ -0.28
GPATCH8-206ENST00000588554 NUP160Q12769 1436 aa13.3□□□□□ -0.28
GPATCH8-206ENST00000588554 ERICH3Q5RHP9 1530 aa13.27□□□□□ -0.29
GPATCH8-206ENST00000588554 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
GPATCH8-206ENST00000588554 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
GPATCH8-206ENST00000588554 PRG4Q92954 1404 aaPredicted RBP13.23□□□□□ -0.29
GPATCH8-206ENST00000588554 IGF1RP08069 1367 aa13.2□□□□□ -0.3
GPATCH8-206ENST00000588554 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
GPATCH8-206ENST00000588554 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
GPATCH8-206ENST00000588554 KIF27Q86VH2 1401 aa13.14□□□□□ -0.31
GPATCH8-206ENST00000588554 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
GPATCH8-206ENST00000588554 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
GPATCH8-206ENST00000588554 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
GPATCH8-206ENST00000588554 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
GPATCH8-206ENST00000588554 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
GPATCH8-206ENST00000588554 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
GPATCH8-206ENST00000588554 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
GPATCH8-206ENST00000588554 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
GPATCH8-206ENST00000588554 FAM69CQ0P6D2 419 aa13.07□□□□□ -0.32
GPATCH8-206ENST00000588554 CUL7Q14999 1698 aa13.06□□□□□ -0.32
GPATCH8-206ENST00000588554 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
GPATCH8-206ENST00000588554 ADCY10Q96PN6 1610 aa13.05□□□□□ -0.32
GPATCH8-206ENST00000588554 PTPRGP23470 1445 aa13.01□□□□□ -0.33
GPATCH8-206ENST00000588554 ABCC10Q5T3U5 1492 aa13.01□□□□□ -0.33
GPATCH8-206ENST00000588554 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
GPATCH8-206ENST00000588554 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
GPATCH8-206ENST00000588554 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
GPATCH8-206ENST00000588554 DIP2BQ9P265 1576 aa12.97□□□□□ -0.33
GPATCH8-206ENST00000588554 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.33
GPATCH8-206ENST00000588554 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
GPATCH8-206ENST00000588554 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
GPATCH8-206ENST00000588554 DISP1Q96F81 1524 aa12.95□□□□□ -0.34
GPATCH8-206ENST00000588554 CARMIL2Q6F5E8 1435 aa12.95□□□□□ -0.34
GPATCH8-206ENST00000588554 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
GPATCH8-206ENST00000588554 TSPOAP1O95153 1857 aa12.91□□□□□ -0.34
GPATCH8-206ENST00000588554 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
GPATCH8-206ENST00000588554 ASXL2Q76L83 1435 aa12.9□□□□□ -0.34
GPATCH8-206ENST00000588554 ABCC2Q92887 1545 aa12.9□□□□□ -0.34
GPATCH8-206ENST00000588554 UACAQ9BZF9 1416 aa12.89□□□□□ -0.35
GPATCH8-206ENST00000588554 UGGT2Q9NYU1 1516 aa12.88□□□□□ -0.35
GPATCH8-206ENST00000588554 UHRF1BP1LA0JNW5 1464 aa12.86□□□□□ -0.35
GPATCH8-206ENST00000588554 KDM6BO15054 1643 aa12.85□□□□□ -0.35
GPATCH8-206ENST00000588554 KIAA0556O60303 1618 aa12.84□□□□□ -0.35
GPATCH8-206ENST00000588554 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
GPATCH8-206ENST00000588554 PLB1Q6P1J6 1458 aa12.84□□□□□ -0.35
GPATCH8-206ENST00000588554 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
GPATCH8-206ENST00000588554 P3H3Q8IVL6 736 aa12.83□□□□□ -0.36
GPATCH8-206ENST00000588554 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
GPATCH8-206ENST00000588554 PPRC1Q5VV67 1664 aaKnown RBP12.81□□□□□ -0.36
GPATCH8-206ENST00000588554 PRXQ9BXM0 1461 aa12.81□□□□□ -0.36
GPATCH8-206ENST00000588554 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
GPATCH8-206ENST00000588554 ZCCHC11Q5TAX3 1644 aaKnown RBP12.8□□□□□ -0.36
GPATCH8-206ENST00000588554 COL17A1Q9UMD9 1497 aaPredicted RBP12.8□□□□□ -0.36
GPATCH8-206ENST00000588554 EPRSP07814 1512 aaKnown RBP12.8□□□□□ -0.36
GPATCH8-206ENST00000588554 SPDYE1Q8NFV5 336 aaPredicted RBP12.8□□□□□ -0.36
GPATCH8-206ENST00000588554 KCNH8Q96L42 1107 aa12.8□□□□□ -0.36
GPATCH8-206ENST00000588554 GLI2P10070 1586 aa12.8□□□□□ -0.36
GPATCH8-206ENST00000588554 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
GPATCH8-206ENST00000588554 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms