RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.28■□□□□ 0.52
PTPRS-204ENST00000587303 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
PTPRS-204ENST00000587303 SENP3-EIF4A1A0A087X0R7 540 aa18.27■□□□□ 0.52
PTPRS-204ENST00000587303 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
PTPRS-204ENST00000587303 ACIN1Q9UKV3 1341 aaKnown RBP18.25■□□□□ 0.51
PTPRS-204ENST00000587303 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
PTPRS-204ENST00000587303 MTUS2Q5JR59 1369 aa18.24■□□□□ 0.51
PTPRS-204ENST00000587303 NPHP1O15259 732 aa18.22■□□□□ 0.51
PTPRS-204ENST00000587303 IRX6P78412 446 aaPredicted RBP18.21■□□□□ 0.51
PTPRS-204ENST00000587303 TAOK2Q9UL54 1235 aa18.21■□□□□ 0.51
PTPRS-204ENST00000587303 PLEKHD1A6NEE1 506 aa18.18■□□□□ 0.5
PTPRS-204ENST00000587303 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
PTPRS-204ENST00000587303 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
PTPRS-204ENST00000587303 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
PTPRS-204ENST00000587303 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
PTPRS-204ENST00000587303 GLIPR1L2Q4G1C9 344 aa18.1■□□□□ 0.49
PTPRS-204ENST00000587303 CCDC136Q96JN2 1154 aa18.1■□□□□ 0.49
PTPRS-204ENST00000587303 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
PTPRS-204ENST00000587303 ERCC6Q03468 1493 aa18.06■□□□□ 0.48
PTPRS-204ENST00000587303 NCLP19338 710 aaKnown RBP18.03■□□□□ 0.48
PTPRS-204ENST00000587303 CFAP53Q96M91 514 aa18.03■□□□□ 0.48
PTPRS-204ENST00000587303 POGKQ9P215 609 aa18.03■□□□□ 0.48
PTPRS-204ENST00000587303 MLECQ14165 292 aa18.01■□□□□ 0.47
PTPRS-204ENST00000587303 LAS1LQ9Y4W2 734 aaKnown RBP17.99■□□□□ 0.47
PTPRS-204ENST00000587303 CFDP1Q9UEE9 299 aaPredicted RBP17.97■□□□□ 0.47
PTPRS-204ENST00000587303 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTPRS-204ENST00000587303 MIER1Q8N108 512 aa17.93■□□□□ 0.46
PTPRS-204ENST00000587303 KNSTRNQ9Y448 316 aa17.92■□□□□ 0.46
PTPRS-204ENST00000587303 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
PTPRS-204ENST00000587303 CDCA8Q53HL2 280 aa17.91■□□□□ 0.46
PTPRS-204ENST00000587303 GOLGA2Q08379 1002 aa17.9■□□□□ 0.46
PTPRS-204ENST00000587303 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
PTPRS-204ENST00000587303 ZRSR1Q15695 479 aaKnown RBP17.9■□□□□ 0.46
PTPRS-204ENST00000587303 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
PTPRS-204ENST00000587303 PTMAP06454 111 aaKnown RBP17.88■□□□□ 0.45
PTPRS-204ENST00000587303 TRIM44Q96DX7 344 aaPredicted RBP17.88■□□□□ 0.45
PTPRS-204ENST00000587303 SOX12O15370 315 aa17.87■□□□□ 0.45
PTPRS-204ENST00000587303 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
PTPRS-204ENST00000587303 CLSTN1O94985 981 aa17.87■□□□□ 0.45
PTPRS-204ENST00000587303 FTSJ3Q8IY81 847 aaKnown RBP17.86■□□□□ 0.45
PTPRS-204ENST00000587303 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
PTPRS-204ENST00000587303 DNTTIP2Q5QJE6 756 aaKnown RBP17.86■□□□□ 0.45
PTPRS-204ENST00000587303 PLCB2Q00722 1185 aa17.85■□□□□ 0.45
PTPRS-204ENST00000587303 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
PTPRS-204ENST00000587303 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
PTPRS-204ENST00000587303 CLIP1P30622 1438 aa17.83■□□□□ 0.45
PTPRS-204ENST00000587303 HDGFP51858 240 aaKnown RBP17.83■□□□□ 0.45
PTPRS-204ENST00000587303 CARD11Q9BXL7 1154 aa17.83■□□□□ 0.44
PTPRS-204ENST00000587303 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
PTPRS-204ENST00000587303 NAP1L2Q9ULW6 460 aaPredicted RBP17.81■□□□□ 0.44
PTPRS-204ENST00000587303 U2SURPO15042 1029 aaKnown RBP17.79■□□□□ 0.44
PTPRS-204ENST00000587303 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
PTPRS-204ENST00000587303 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
PTPRS-204ENST00000587303 ISY1Q9ULR0 285 aaKnown RBP17.77■□□□□ 0.44
PTPRS-204ENST00000587303 BECN1Q14457 450 aa17.77■□□□□ 0.44
PTPRS-204ENST00000587303 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.43
PTPRS-204ENST00000587303 FGD1P98174 961 aa17.76■□□□□ 0.43
PTPRS-204ENST00000587303 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
PTPRS-204ENST00000587303 GOLGA6L22H0YM25 854 aa17.75■□□□□ 0.43
PTPRS-204ENST00000587303 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
PTPRS-204ENST00000587303 KANK1Q14678 1352 aa17.74■□□□□ 0.43
PTPRS-204ENST00000587303 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTPRS-204ENST00000587303 RTN4Q9NQC3 1192 aaKnown RBP17.73■□□□□ 0.43
PTPRS-204ENST00000587303 SRPK2P78362 688 aaKnown RBP17.73■□□□□ 0.43
PTPRS-204ENST00000587303 KCNJ4P48050 445 aa17.71■□□□□ 0.43
PTPRS-204ENST00000587303 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
PTPRS-204ENST00000587303 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.42
PTPRS-204ENST00000587303 FRAT1Q92837 279 aaPredicted RBP17.7■□□□□ 0.42
PTPRS-204ENST00000587303 GGT6Q6P531 493 aa17.7■□□□□ 0.42
PTPRS-204ENST00000587303 CSB-PGBD3P0DP91 1061 aa17.69■□□□□ 0.42
PTPRS-204ENST00000587303 CC2D1BQ5T0F9 858 aaKnown RBP17.69■□□□□ 0.42
PTPRS-204ENST00000587303 PNNQ9H307 717 aaKnown RBP17.67■□□□□ 0.42
PTPRS-204ENST00000587303 ZNF330Q9Y3S2 320 aaPredicted RBP17.67■□□□□ 0.42
PTPRS-204ENST00000587303 SIN3AQ96ST3 1273 aa17.67■□□□□ 0.42
PTPRS-204ENST00000587303 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
PTPRS-204ENST00000587303 STK26Q9P289 416 aa17.66■□□□□ 0.42
PTPRS-204ENST00000587303 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
PTPRS-204ENST00000587303 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
PTPRS-204ENST00000587303 NAP1L5Q96NT1 182 aaPredicted RBP17.65■□□□□ 0.42
PTPRS-204ENST00000587303 DDRGK1Q96HY6 314 aa17.65■□□□□ 0.42
PTPRS-204ENST00000587303 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
PTPRS-204ENST00000587303 KIF27Q86VH2 1401 aa17.64■□□□□ 0.41
PTPRS-204ENST00000587303 SUPT16HQ9Y5B9 1047 aaKnown RBP17.63■□□□□ 0.41
PTPRS-204ENST00000587303 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
PTPRS-204ENST00000587303 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
PTPRS-204ENST00000587303 RGS3P49796 1198 aa17.61■□□□□ 0.41
PTPRS-204ENST00000587303 CHMP4BQ9H444 224 aaKnown RBP17.6■□□□□ 0.41
PTPRS-204ENST00000587303 DCAF11Q8TEB1 546 aa17.59■□□□□ 0.41
PTPRS-204ENST00000587303 PRM3Q9NNZ6 103 aa17.59■□□□□ 0.41
PTPRS-204ENST00000587303 TMF1P82094 1093 aa17.57■□□□□ 0.4
PTPRS-204ENST00000587303 PDE4CQ08493 712 aa17.57■□□□□ 0.4
PTPRS-204ENST00000587303 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
PTPRS-204ENST00000587303 ERICH6BQ5W0A0 696 aa17.56■□□□□ 0.4
PTPRS-204ENST00000587303 SPRYD3Q8NCJ5 442 aa17.56■□□□□ 0.4
PTPRS-204ENST00000587303 MORC1Q86VD1 984 aa17.55■□□□□ 0.4
PTPRS-204ENST00000587303 ANP32EQ9BTT0 268 aa17.54■□□□□ 0.4
PTPRS-204ENST00000587303 MS4A1P11836 297 aa17.53■□□□□ 0.4
PTPRS-204ENST00000587303 HDGFL2Q7Z4V5 671 aaPredicted RBP17.53■□□□□ 0.4
PTPRS-204ENST00000587303 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
PTPRS-204ENST00000587303 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms