RNA–Protein interactions for RNA: ENST00000580974.5

PITPNC1-203, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITPNC1, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-203ENST00000580974 PLCB2Q00722 1185 aa20.73■□□□□ 0.91
PITPNC1-203ENST00000580974 ESF1Q9H501 851 aaKnown RBP20.71■□□□□ 0.91
PITPNC1-203ENST00000580974 GOLGA6L6A8MZA4 724 aa20.71■□□□□ 0.91
PITPNC1-203ENST00000580974 CASC1Q6TDU7 716 aa20.7■□□□□ 0.9
PITPNC1-203ENST00000580974 NOP58Q9Y2X3 529 aaKnown RBP20.69■□□□□ 0.9
PITPNC1-203ENST00000580974 TULP1O00294 542 aaPredicted RBP20.65■□□□□ 0.9
PITPNC1-203ENST00000580974 CHAF1AQ13111 956 aaPredicted RBP20.64■□□□□ 0.89
PITPNC1-203ENST00000580974 NRDCO43847 1150 aa20.59■□□□□ 0.89
PITPNC1-203ENST00000580974 MSNP26038 577 aaKnown RBP20.59■□□□□ 0.89
PITPNC1-203ENST00000580974 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
PITPNC1-203ENST00000580974 DEKP35659 375 aaKnown RBP20.56■□□□□ 0.88
PITPNC1-203ENST00000580974 KDM2AQ9Y2K7 1162 aa20.56■□□□□ 0.88
PITPNC1-203ENST00000580974 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
PITPNC1-203ENST00000580974 HIRIP3Q9BW71 556 aaPredicted RBP20.55■□□□□ 0.88
PITPNC1-203ENST00000580974 ARID4BQ4LE39 1312 aaPredicted RBP20.54■□□□□ 0.88
PITPNC1-203ENST00000580974 L1TD1Q5T7N2 865 aaKnown RBP20.54■□□□□ 0.88
PITPNC1-203ENST00000580974 SUPT16HQ9Y5B9 1047 aaKnown RBP20.54■□□□□ 0.88
PITPNC1-203ENST00000580974 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
PITPNC1-203ENST00000580974 A0A0G2JS52 829 aa20.52■□□□□ 0.88
PITPNC1-203ENST00000580974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.51■□□□□ 0.87
PITPNC1-203ENST00000580974 FTSJ3Q8IY81 847 aaKnown RBP20.5■□□□□ 0.87
PITPNC1-203ENST00000580974 CHIC2Q9UKJ5 165 aa20.49■□□□□ 0.87
PITPNC1-203ENST00000580974 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
PITPNC1-203ENST00000580974 RGS3P49796 1198 aa20.47■□□□□ 0.87
PITPNC1-203ENST00000580974 EIF4G2P78344 907 aaKnown RBP eCLIP20.46■□□□□ 0.87
PITPNC1-203ENST00000580974 TAOK2Q9UL54 1235 aa20.46■□□□□ 0.87
PITPNC1-203ENST00000580974 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
PITPNC1-203ENST00000580974 TNNT3P45378 269 aaPredicted RBP20.44■□□□□ 0.86
PITPNC1-203ENST00000580974 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
PITPNC1-203ENST00000580974 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
PITPNC1-203ENST00000580974 DRC7Q8IY82 874 aa20.43■□□□□ 0.86
PITPNC1-203ENST00000580974 GOLGA6L4A6NEF3 574 aa20.4■□□□□ 0.86
PITPNC1-203ENST00000580974 ARID3AQ99856 593 aa20.4■□□□□ 0.86
PITPNC1-203ENST00000580974 HSCBQ8IWL3 235 aa20.39■□□□□ 0.85
PITPNC1-203ENST00000580974 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
PITPNC1-203ENST00000580974 PABPN1Q86U42 306 aaKnown RBP eCLIP20.37■□□□□ 0.85
PITPNC1-203ENST00000580974 FGD1P98174 961 aa20.37■□□□□ 0.85
PITPNC1-203ENST00000580974 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
PITPNC1-203ENST00000580974 NAP1L2Q9ULW6 460 aaPredicted RBP20.33■□□□□ 0.85
PITPNC1-203ENST00000580974 C14orf37Q86TY3 774 aa20.33■□□□□ 0.84
PITPNC1-203ENST00000580974 PLEKHG5O94827 1062 aa20.32■□□□□ 0.84
PITPNC1-203ENST00000580974 SPRYD3Q8NCJ5 442 aa20.3■□□□□ 0.84
PITPNC1-203ENST00000580974 KCNJ4P48050 445 aa20.3■□□□□ 0.84
PITPNC1-203ENST00000580974 FRAT1Q92837 279 aaPredicted RBP20.29■□□□□ 0.84
PITPNC1-203ENST00000580974 PNNQ9H307 717 aaKnown RBP20.29■□□□□ 0.84
PITPNC1-203ENST00000580974 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
PITPNC1-203ENST00000580974 KIAA2012Q0VF49 1180 aa20.27■□□□□ 0.83
PITPNC1-203ENST00000580974 NEUROD2Q15784 382 aa20.26■□□□□ 0.83
PITPNC1-203ENST00000580974 CHMP4BQ9H444 224 aaKnown RBP20.26■□□□□ 0.83
PITPNC1-203ENST00000580974 OS9Q13438 667 aaPredicted RBP20.25■□□□□ 0.83
PITPNC1-203ENST00000580974 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
PITPNC1-203ENST00000580974 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
PITPNC1-203ENST00000580974 TSPY4P0CV99 314 aa20.24■□□□□ 0.83
PITPNC1-203ENST00000580974 TSPY10P0CW01 314 aa20.24■□□□□ 0.83
PITPNC1-203ENST00000580974 CLSTN1O94985 981 aa20.23■□□□□ 0.83
PITPNC1-203ENST00000580974 MAPK8IP3Q9UPT6 1336 aa20.23■□□□□ 0.83
PITPNC1-203ENST00000580974 NOC3LQ8WTT2 800 aaKnown RBP20.22■□□□□ 0.83
PITPNC1-203ENST00000580974 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
PITPNC1-203ENST00000580974 MS4A1P11836 297 aa20.2■□□□□ 0.82
PITPNC1-203ENST00000580974 MCCP23508 829 aa20.2■□□□□ 0.82
PITPNC1-203ENST00000580974 RBM19Q9Y4C8 960 aaKnown RBP20.2■□□□□ 0.82
PITPNC1-203ENST00000580974 PTMSP20962 102 aa20.19■□□□□ 0.82
PITPNC1-203ENST00000580974 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
PITPNC1-203ENST00000580974 GOLGA6L1Q8N7Z2 621 aa20.16■□□□□ 0.82
PITPNC1-203ENST00000580974 NPM1P06748 294 aaKnown RBP eCLIP20.16■□□□□ 0.82
PITPNC1-203ENST00000580974 GZF1Q9H116 711 aaPredicted RBP20.16■□□□□ 0.82
PITPNC1-203ENST00000580974 GBP4Q96PP9 640 aa20.16■□□□□ 0.82
PITPNC1-203ENST00000580974 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
PITPNC1-203ENST00000580974 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
PITPNC1-203ENST00000580974 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
PITPNC1-203ENST00000580974 MTUS2Q5JR59 1369 aa20.11■□□□□ 0.81
PITPNC1-203ENST00000580974 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
PITPNC1-203ENST00000580974 GOLGA6L3A6NEY3 463 aa20.09■□□□□ 0.81
PITPNC1-203ENST00000580974 A0A0U1RQG5 324 aaPredicted RBP20.08■□□□□ 0.81
PITPNC1-203ENST00000580974 CFAP44Q96MT7 982 aa20.08■□□□□ 0.81
PITPNC1-203ENST00000580974 RGL3Q3MIN7 710 aa20.08■□□□□ 0.8
PITPNC1-203ENST00000580974 GOLGA2Q08379 1002 aa20.07■□□□□ 0.8
PITPNC1-203ENST00000580974 HSP90AA2PQ14568 343 aaPredicted RBP20.07■□□□□ 0.8
PITPNC1-203ENST00000580974 SYAP1Q96A49 352 aaPredicted RBP20.06■□□□□ 0.8
PITPNC1-203ENST00000580974 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
PITPNC1-203ENST00000580974 HAP1P54257 671 aaPredicted RBP20.05■□□□□ 0.8
PITPNC1-203ENST00000580974 SETQ01105 290 aaPredicted RBP20.05■□□□□ 0.8
PITPNC1-203ENST00000580974 NPHP1O15259 732 aa20.03■□□□□ 0.8
PITPNC1-203ENST00000580974 TPM4P67936 248 aa20.03■□□□□ 0.8
PITPNC1-203ENST00000580974 SLKQ9H2G2 1235 aaPredicted RBP20.02■□□□□ 0.8
PITPNC1-203ENST00000580974 CC2D1BQ5T0F9 858 aaKnown RBP20.02■□□□□ 0.8
PITPNC1-203ENST00000580974 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
PITPNC1-203ENST00000580974 VSIG10Q8N0Z9 540 aa19.99■□□□□ 0.79
PITPNC1-203ENST00000580974 CALRP27797 417 aaKnown RBP19.99■□□□□ 0.79
PITPNC1-203ENST00000580974 USP35Q9P2H5 1018 aa19.98■□□□□ 0.79
PITPNC1-203ENST00000580974 U2SURPO15042 1029 aaKnown RBP19.98■□□□□ 0.79
PITPNC1-203ENST00000580974 RSPH6AQ9H0K4 717 aa19.97■□□□□ 0.79
PITPNC1-203ENST00000580974 KIAA1211Q6ZU35 1233 aa19.95■□□□□ 0.78
PITPNC1-203ENST00000580974 ISY1Q9ULR0 285 aaKnown RBP19.95■□□□□ 0.78
PITPNC1-203ENST00000580974 PRM3Q9NNZ6 103 aa19.93■□□□□ 0.78
PITPNC1-203ENST00000580974 PDE4CQ08493 712 aa19.92■□□□□ 0.78
PITPNC1-203ENST00000580974 CALD1Q05682 793 aaKnown RBP19.89■□□□□ 0.77
PITPNC1-203ENST00000580974 APBB1O00213 710 aa19.89■□□□□ 0.77
PITPNC1-203ENST00000580974 TCERG1O14776 1098 aaKnown RBP19.89■□□□□ 0.77
PITPNC1-203ENST00000580974 HSP90B1P14625 803 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms