RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ASTLQ6HA08 431 aaPredicted RBP11.58□□□□□ -0.56
KPNB1-208ENST00000580019 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
KPNB1-208ENST00000580019 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
KPNB1-208ENST00000580019 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
KPNB1-208ENST00000580019 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
KPNB1-208ENST00000580019 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
KPNB1-208ENST00000580019 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
KPNB1-208ENST00000580019 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
KPNB1-208ENST00000580019 MNX1P50219 401 aaPredicted RBP11.35□□□□□ -0.59
KPNB1-208ENST00000580019 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
KPNB1-208ENST00000580019 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
KPNB1-208ENST00000580019 MMRN1Q13201 1228 aa11.22□□□□□ -0.61
KPNB1-208ENST00000580019 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
KPNB1-208ENST00000580019 SEC24BO95487 1268 aa11.2□□□□□ -0.62
KPNB1-208ENST00000580019 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
KPNB1-208ENST00000580019 TIE1P35590 1138 aa11.19□□□□□ -0.62
KPNB1-208ENST00000580019 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
KPNB1-208ENST00000580019 SPDYE4A6NLX3 237 aa11.18□□□□□ -0.62
KPNB1-208ENST00000580019 ST18O60284 1047 aa11.18□□□□□ -0.62
KPNB1-208ENST00000580019 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
KPNB1-208ENST00000580019 COLQQ9Y215 455 aaPredicted RBP11.16□□□□□ -0.62
KPNB1-208ENST00000580019 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
KPNB1-208ENST00000580019 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
KPNB1-208ENST00000580019 IER5LQ5T953 404 aa11.09□□□□□ -0.63
KPNB1-208ENST00000580019 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
KPNB1-208ENST00000580019 MAP3K13O43283 966 aa11.08□□□□□ -0.64
KPNB1-208ENST00000580019 TMEM121BQ9BXQ6 578 aaPredicted RBP11.05□□□□□ -0.64
KPNB1-208ENST00000580019 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
KPNB1-208ENST00000580019 SNPHO15079 494 aa10.96□□□□□ -0.65
KPNB1-208ENST00000580019 SGIP1Q9BQI5 828 aa10.93□□□□□ -0.66
KPNB1-208ENST00000580019 PLCG2P16885 1265 aa10.92□□□□□ -0.66
KPNB1-208ENST00000580019 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
KPNB1-208ENST00000580019 MARVELD3Q96A59 401 aa10.9□□□□□ -0.66
KPNB1-208ENST00000580019 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
KPNB1-208ENST00000580019 PCDHB13Q9Y5F0 798 aa10.88□□□□□ -0.67
KPNB1-208ENST00000580019 IRX5P78411 483 aaPredicted RBP10.82□□□□□ -0.68
KPNB1-208ENST00000580019 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
KPNB1-208ENST00000580019 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.82□□□□□ -0.68
KPNB1-208ENST00000580019 EMP3P54852 163 aa10.8□□□□□ -0.68
KPNB1-208ENST00000580019 IFNL1Q8IU54 200 aa10.78□□□□□ -0.68
KPNB1-208ENST00000580019 MIER1Q8N108 512 aa10.77□□□□□ -0.69
KPNB1-208ENST00000580019 PROM2Q8N271 834 aa10.77□□□□□ -0.69
KPNB1-208ENST00000580019 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
KPNB1-208ENST00000580019 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
KPNB1-208ENST00000580019 OCEL1Q9H607 264 aa10.77□□□□□ -0.69
KPNB1-208ENST00000580019 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
KPNB1-208ENST00000580019 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
KPNB1-208ENST00000580019 FAM205CA6NFA0 338 aa10.69□□□□□ -0.7
KPNB1-208ENST00000580019 POTEB3A0JP26 581 aa10.68□□□□□ -0.7
KPNB1-208ENST00000580019 POTEBQ6S5H4 581 aa10.68□□□□□ -0.7
KPNB1-208ENST00000580019 C3orf67Q6ZVT6 689 aa10.64□□□□□ -0.71
KPNB1-208ENST00000580019 NUBP1P53384 320 aa10.61□□□□□ -0.71
KPNB1-208ENST00000580019 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
KPNB1-208ENST00000580019 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
KPNB1-208ENST00000580019 PLCD3Q8N3E9 789 aa10.59□□□□□ -0.71
KPNB1-208ENST00000580019 RNF166Q96A37 237 aaPredicted RBP10.58□□□□□ -0.72
KPNB1-208ENST00000580019 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
KPNB1-208ENST00000580019 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
KPNB1-208ENST00000580019 MYT1LQ9UL68 1186 aa10.47□□□□□ -0.73
KPNB1-208ENST00000580019 GOLGA2Q08379 1002 aa10.45□□□□□ -0.74
KPNB1-208ENST00000580019 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
KPNB1-208ENST00000580019 PCDHB8Q9UN66 801 aa10.45□□□□□ -0.74
KPNB1-208ENST00000580019 ERBB3P21860 1342 aa10.43□□□□□ -0.74
KPNB1-208ENST00000580019 PYGBP11216 843 aa10.43□□□□□ -0.74
KPNB1-208ENST00000580019 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
KPNB1-208ENST00000580019 HOXB3P14651 431 aaPredicted RBP10.4□□□□□ -0.74
KPNB1-208ENST00000580019 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
KPNB1-208ENST00000580019 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
KPNB1-208ENST00000580019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.74
KPNB1-208ENST00000580019 PTGER2P43116 358 aa10.35□□□□□ -0.75
KPNB1-208ENST00000580019 DOK7Q18PE1 504 aa10.34□□□□□ -0.75
KPNB1-208ENST00000580019 G3V3G9 751 aa10.32□□□□□ -0.76
KPNB1-208ENST00000580019 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
KPNB1-208ENST00000580019 ZNF467Q7Z7K2 595 aaPredicted RBP10.32□□□□□ -0.76
KPNB1-208ENST00000580019 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
KPNB1-208ENST00000580019 ILDR1Q86SU0 546 aaPredicted RBP10.28□□□□□ -0.76
KPNB1-208ENST00000580019 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
KPNB1-208ENST00000580019 BOLA1Q9Y3E2 137 aa10.27□□□□□ -0.77
KPNB1-208ENST00000580019 DPY19L2Q6NUT2 758 aa10.25□□□□□ -0.77
KPNB1-208ENST00000580019 PSEN1P49768 467 aa10.22□□□□□ -0.77
KPNB1-208ENST00000580019 EHMT2Q96KQ7 1210 aa10.19□□□□□ -0.78
KPNB1-208ENST00000580019 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
KPNB1-208ENST00000580019 ANKRD13DQ6ZTN6 518 aa10.17□□□□□ -0.78
KPNB1-208ENST00000580019 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
KPNB1-208ENST00000580019 GSE1Q14687 1217 aa10.16□□□□□ -0.78
KPNB1-208ENST00000580019 CHRM1P11229 460 aaPredicted RBP10.14□□□□□ -0.79
KPNB1-208ENST00000580019 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
KPNB1-208ENST00000580019 CABP2Q9NPB3 220 aa10.1□□□□□ -0.79
KPNB1-208ENST00000580019 GPR153Q6NV75 609 aa10.09□□□□□ -0.79
KPNB1-208ENST00000580019 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
KPNB1-208ENST00000580019 HCSTQ9UBK5 93 aa10.06□□□□□ -0.8
KPNB1-208ENST00000580019 ZNF316A6NFI3 1004 aaPredicted RBP10□□□□□ -0.81
KPNB1-208ENST00000580019 ARSIQ5FYB1 569 aa9.98□□□□□ -0.81
KPNB1-208ENST00000580019 TMEM92Q6UXU6 159 aa9.98□□□□□ -0.81
KPNB1-208ENST00000580019 PBX2P40425 430 aa9.97□□□□□ -0.81
KPNB1-208ENST00000580019 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
KPNB1-208ENST00000580019 MICALL2Q8IY33 904 aa9.95□□□□□ -0.82
KPNB1-208ENST00000580019 FBXO3Q9UK99 471 aa9.91□□□□□ -0.82
KPNB1-208ENST00000580019 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
KPNB1-208ENST00000580019 EFCAB3Q8N7B9 438 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms