RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 IRX6P78412 446 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-202ENST00000573710 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.1■□□□□ 0.97
CACNA1A-202ENST00000573710 NAP1L2Q9ULW6 460 aaPredicted RBP21.1■□□□□ 0.97
CACNA1A-202ENST00000573710 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
CACNA1A-202ENST00000573710 NAP1L5Q96NT1 182 aaPredicted RBP21.08■□□□□ 0.97
CACNA1A-202ENST00000573710 ERICH6BQ5W0A0 696 aa21.08■□□□□ 0.96
CACNA1A-202ENST00000573710 SENP3-EIF4A1A0A087X0R7 540 aa21.08■□□□□ 0.96
CACNA1A-202ENST00000573710 ISY1Q9ULR0 285 aaKnown RBP21.08■□□□□ 0.96
CACNA1A-202ENST00000573710 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
CACNA1A-202ENST00000573710 HNRNPUQ00839 825 aaKnown RBP eCLIP21.06■□□□□ 0.96
CACNA1A-202ENST00000573710 ARID3AQ99856 593 aa21.05■□□□□ 0.96
CACNA1A-202ENST00000573710 WDR43Q15061 677 aaKnown RBP eCLIP21.05■□□□□ 0.96
CACNA1A-202ENST00000573710 LMOD2Q6P5Q4 547 aa21.03■□□□□ 0.96
CACNA1A-202ENST00000573710 KDM2AQ9Y2K7 1162 aa21.02■□□□□ 0.96
CACNA1A-202ENST00000573710 CCDC136Q96JN2 1154 aa21.02■□□□□ 0.96
CACNA1A-202ENST00000573710 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.96
CACNA1A-202ENST00000573710 PPM1GO15355 546 aaPredicted RBP20.98■□□□□ 0.95
CACNA1A-202ENST00000573710 TMC1Q8TDI8 760 aa20.96■□□□□ 0.95
CACNA1A-202ENST00000573710 GOLGA2Q08379 1002 aa20.93■□□□□ 0.94
CACNA1A-202ENST00000573710 KRI1Q8N9T8 703 aaKnown RBP20.92■□□□□ 0.94
CACNA1A-202ENST00000573710 LAS1LQ9Y4W2 734 aaKnown RBP20.91■□□□□ 0.94
CACNA1A-202ENST00000573710 NOC3LQ8WTT2 800 aaKnown RBP20.9■□□□□ 0.94
CACNA1A-202ENST00000573710 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.94
CACNA1A-202ENST00000573710 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-202ENST00000573710 GOLGA6L22H0YM25 854 aa20.85■□□□□ 0.93
CACNA1A-202ENST00000573710 FGD1P98174 961 aa20.84■□□□□ 0.93
CACNA1A-202ENST00000573710 DDX10Q13206 875 aaKnown RBP20.82■□□□□ 0.92
CACNA1A-202ENST00000573710 CHIC2Q9UKJ5 165 aa20.79■□□□□ 0.92
CACNA1A-202ENST00000573710 DRC7Q8IY82 874 aa20.77■□□□□ 0.92
CACNA1A-202ENST00000573710 WWC1Q8IX03 1113 aa20.77■□□□□ 0.92
CACNA1A-202ENST00000573710 BECN1Q14457 450 aa20.76■□□□□ 0.91
CACNA1A-202ENST00000573710 OS9Q13438 667 aaPredicted RBP20.76■□□□□ 0.91
CACNA1A-202ENST00000573710 CASC1Q6TDU7 716 aa20.75■□□□□ 0.91
CACNA1A-202ENST00000573710 GOLGA6L6A8MZA4 724 aa20.74■□□□□ 0.91
CACNA1A-202ENST00000573710 A0A0U1RQG5 324 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-202ENST00000573710 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
CACNA1A-202ENST00000573710 PNNQ9H307 717 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-202ENST00000573710 KCNJ4P48050 445 aa20.71■□□□□ 0.91
CACNA1A-202ENST00000573710 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
CACNA1A-202ENST00000573710 PATL2C9JE40 543 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-202ENST00000573710 SPRYD3Q8NCJ5 442 aa20.66■□□□□ 0.9
CACNA1A-202ENST00000573710 NEUROD2Q15784 382 aa20.66■□□□□ 0.9
CACNA1A-202ENST00000573710 ABCC9O60706 1549 aa20.65■□□□□ 0.9
CACNA1A-202ENST00000573710 FTSJ3Q8IY81 847 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-202ENST00000573710 SOX12O15370 315 aa20.64■□□□□ 0.9
CACNA1A-202ENST00000573710 KIAA2012Q0VF49 1180 aa20.64■□□□□ 0.9
CACNA1A-202ENST00000573710 ACIN1Q9UKV3 1341 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-202ENST00000573710 MRS2Q9HD23 443 aa20.61■□□□□ 0.89
CACNA1A-202ENST00000573710 TNNT3P45378 269 aaPredicted RBP20.59■□□□□ 0.89
CACNA1A-202ENST00000573710 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
CACNA1A-202ENST00000573710 CREBRFQ8IUR6 639 aa20.58■□□□□ 0.89
CACNA1A-202ENST00000573710 CHAF1AQ13111 956 aaPredicted RBP20.58■□□□□ 0.89
CACNA1A-202ENST00000573710 GNL2Q13823 731 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-202ENST00000573710 GOLGA6L4A6NEF3 574 aa20.55■□□□□ 0.88
CACNA1A-202ENST00000573710 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
CACNA1A-202ENST00000573710 KCNH8Q96L42 1107 aa20.54■□□□□ 0.88
CACNA1A-202ENST00000573710 DDRGK1Q96HY6 314 aa20.54■□□□□ 0.88
CACNA1A-202ENST00000573710 NRDCO43847 1150 aa20.53■□□□□ 0.88
CACNA1A-202ENST00000573710 RGL3Q3MIN7 710 aa20.51■□□□□ 0.87
CACNA1A-202ENST00000573710 MSNP26038 577 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-202ENST00000573710 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-202ENST00000573710 FRAT1Q92837 279 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-202ENST00000573710 CNKSR2Q8WXI2 1034 aa20.44■□□□□ 0.86
CACNA1A-202ENST00000573710 ANP32EQ9BTT0 268 aa20.44■□□□□ 0.86
CACNA1A-202ENST00000573710 RGS3P49796 1198 aa20.44■□□□□ 0.86
CACNA1A-202ENST00000573710 CALRP27797 417 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-202ENST00000573710 CCDC9Q9Y3X0 531 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-202ENST00000573710 TAF7LQ5H9L4 462 aa20.41■□□□□ 0.86
CACNA1A-202ENST00000573710 G3V3G9 751 aa20.4■□□□□ 0.86
CACNA1A-202ENST00000573710 DCAF8Q5TAQ9 597 aa20.4■□□□□ 0.86
CACNA1A-202ENST00000573710 VPS53Q5VIR6 699 aa20.4■□□□□ 0.86
CACNA1A-202ENST00000573710 L1TD1Q5T7N2 865 aaKnown RBP20.4■□□□□ 0.86
CACNA1A-202ENST00000573710 TMX4Q9H1E5 349 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-202ENST00000573710 APBB1O00213 710 aa20.38■□□□□ 0.85
CACNA1A-202ENST00000573710 TSPY4P0CV99 314 aa20.36■□□□□ 0.85
CACNA1A-202ENST00000573710 TSPY10P0CW01 314 aa20.36■□□□□ 0.85
CACNA1A-202ENST00000573710 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
CACNA1A-202ENST00000573710 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
CACNA1A-202ENST00000573710 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-202ENST00000573710 POGKQ9P215 609 aa20.33■□□□□ 0.84
CACNA1A-202ENST00000573710 HSP90B1P14625 803 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-202ENST00000573710 GOLGA6L1Q8N7Z2 621 aa20.31■□□□□ 0.84
CACNA1A-202ENST00000573710 MLECQ14165 292 aa20.29■□□□□ 0.84
CACNA1A-202ENST00000573710 PTMSP20962 102 aa20.28■□□□□ 0.84
CACNA1A-202ENST00000573710 CEP89Q96ST8 783 aa20.28■□□□□ 0.84
CACNA1A-202ENST00000573710 GZF1Q9H116 711 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-202ENST00000573710 CHMP3Q9Y3E7 222 aa20.26■□□□□ 0.83
CACNA1A-202ENST00000573710 PES1O00541 588 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-202ENST00000573710 KNSTRNQ9Y448 316 aa20.24■□□□□ 0.83
CACNA1A-202ENST00000573710 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-202ENST00000573710 RRP7BPQ9NSQ0 103 aa20.24■□□□□ 0.83
CACNA1A-202ENST00000573710 RASSF8Q8NHQ8 419 aa20.24■□□□□ 0.83
CACNA1A-202ENST00000573710 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.83
CACNA1A-202ENST00000573710 SAFB2Q14151 953 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACNA1A-202ENST00000573710 CC2D1BQ5T0F9 858 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-202ENST00000573710 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
CACNA1A-202ENST00000573710 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-202ENST00000573710 RAD21O60216 631 aa20.16■□□□□ 0.82
CACNA1A-202ENST00000573710 HSCBQ8IWL3 235 aa20.15■□□□□ 0.82
CACNA1A-202ENST00000573710 KLHL34Q8N239 644 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms