RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 APLP2Q06481 763 aa13.15□□□□□ -0.3
CNOT1-218ENST00000569732 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-218ENST00000569732 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.315e-8■□□□□ 9.7
CNOT1-218ENST00000569732 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-218ENST00000569732 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-218ENST00000569732 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
CNOT1-218ENST00000569732 FBLN2P98095 1184 aa13.07□□□□□ -0.32
CNOT1-218ENST00000569732 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
CNOT1-218ENST00000569732 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
CNOT1-218ENST00000569732 SOGA1O94964 1423 aa13.02□□□□□ -0.33
CNOT1-218ENST00000569732 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
CNOT1-218ENST00000569732 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
CNOT1-218ENST00000569732 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
CNOT1-218ENST00000569732 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
CNOT1-218ENST00000569732 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
CNOT1-218ENST00000569732 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
CNOT1-218ENST00000569732 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
CNOT1-218ENST00000569732 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
CNOT1-218ENST00000569732 SYNJ2O15056 1496 aa12.96□□□□□ -0.34
CNOT1-218ENST00000569732 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
CNOT1-218ENST00000569732 CUX1P39880 1505 aa12.91□□□□□ -0.34
CNOT1-218ENST00000569732 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
CNOT1-218ENST00000569732 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
CNOT1-218ENST00000569732 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
CNOT1-218ENST00000569732 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-218ENST00000569732 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
CNOT1-218ENST00000569732 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.36
CNOT1-218ENST00000569732 CAPN15O75808 1086 aa12.81□□□□□ -0.36
CNOT1-218ENST00000569732 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
CNOT1-218ENST00000569732 C1QBPQ07021 282 aaKnown RBP12.79□□□□□ -0.36
CNOT1-218ENST00000569732 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-218ENST00000569732 POLA2Q14181 598 aa12.78□□□□□ -0.36
CNOT1-218ENST00000569732 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
CNOT1-218ENST00000569732 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
CNOT1-218ENST00000569732 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
CNOT1-218ENST00000569732 NUP160Q12769 1436 aa12.76□□□□□ -0.37
CNOT1-218ENST00000569732 ADAMTS12P58397 1594 aa12.76□□□□□ -0.37
CNOT1-218ENST00000569732 SHROOM2Q13796 1616 aa12.75□□□□□ -0.37
CNOT1-218ENST00000569732 WRNQ14191 1432 aaPredicted RBP eCLIP12.72□□□□□ -0.37
CNOT1-218ENST00000569732 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
CNOT1-218ENST00000569732 KIF13AQ9H1H9 1805 aa12.7□□□□□ -0.38
CNOT1-218ENST00000569732 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
CNOT1-218ENST00000569732 ERICH3Q5RHP9 1530 aa12.68□□□□□ -0.38
CNOT1-218ENST00000569732 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
CNOT1-218ENST00000569732 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
CNOT1-218ENST00000569732 PRG4Q92954 1404 aaPredicted RBP12.63□□□□□ -0.39
CNOT1-218ENST00000569732 ABCC10Q5T3U5 1492 aa12.62□□□□□ -0.39
CNOT1-218ENST00000569732 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
CNOT1-218ENST00000569732 MAPKBP1O60336 1514 aa12.62□□□□□ -0.39
CNOT1-218ENST00000569732 ABCB7O75027 752 aa12.6□□□□□ -0.39
CNOT1-218ENST00000569732 PROM2Q8N271 834 aa12.6□□□□□ -0.39
CNOT1-218ENST00000569732 JPH4Q96JJ6 628 aa12.6□□□□□ -0.39
CNOT1-218ENST00000569732 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-218ENST00000569732 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
CNOT1-218ENST00000569732 DIP2BQ9P265 1576 aa12.59□□□□□ -0.39
CNOT1-218ENST00000569732 NPM1P06748 294 aaKnown RBP eCLIP12.58□□□□□ -0.4
CNOT1-218ENST00000569732 FAM69CQ0P6D2 419 aa12.57□□□□□ -0.4
CNOT1-218ENST00000569732 KDM6BO15054 1643 aa12.55□□□□□ -0.4
CNOT1-218ENST00000569732 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
CNOT1-218ENST00000569732 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
CNOT1-218ENST00000569732 KIAA0586Q9BVV6 1533 aa12.49□□□□□ -0.41
CNOT1-218ENST00000569732 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
CNOT1-218ENST00000569732 CUL7Q14999 1698 aa12.46□□□□□ -0.41
CNOT1-218ENST00000569732 DSG3P32926 999 aa12.45□□□□□ -0.42
CNOT1-218ENST00000569732 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
CNOT1-218ENST00000569732 TSPOAP1O95153 1857 aa12.44□□□□□ -0.42
CNOT1-218ENST00000569732 GLI2P10070 1586 aa12.4□□□□□ -0.42
CNOT1-218ENST00000569732 PTPRGP23470 1445 aa12.4□□□□□ -0.42
CNOT1-218ENST00000569732 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
CNOT1-218ENST00000569732 ABCC2Q92887 1545 aa12.4□□□□□ -0.42
CNOT1-218ENST00000569732 IGF1RP08069 1367 aa12.4□□□□□ -0.42
CNOT1-218ENST00000569732 PLB1Q6P1J6 1458 aa12.39□□□□□ -0.43
CNOT1-218ENST00000569732 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
CNOT1-218ENST00000569732 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-218ENST00000569732 TNIKQ9UKE5 1360 aa12.37□□□□□ -0.43
CNOT1-218ENST00000569732 PPRC1Q5VV67 1664 aaKnown RBP12.37□□□□□ -0.43
CNOT1-218ENST00000569732 ASXL2Q76L83 1435 aa12.37□□□□□ -0.43
CNOT1-218ENST00000569732 UHRF1BP1LA0JNW5 1464 aa12.36□□□□□ -0.43
CNOT1-218ENST00000569732 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
CNOT1-218ENST00000569732 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-218ENST00000569732 IQGAP2Q13576 1575 aa12.34□□□□□ -0.43
CNOT1-218ENST00000569732 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-218ENST00000569732 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
CNOT1-218ENST00000569732 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
CNOT1-218ENST00000569732 MAP3K4Q9Y6R4 1608 aa12.32□□□□□ -0.44
CNOT1-218ENST00000569732 TEX14Q8IWB6 1497 aa12.32□□□□□ -0.44
CNOT1-218ENST00000569732 EPRSP07814 1512 aaKnown RBP12.3□□□□□ -0.44
CNOT1-218ENST00000569732 KDM5BQ9UGL1 1544 aa12.3□□□□□ -0.44
CNOT1-218ENST00000569732 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
CNOT1-218ENST00000569732 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
CNOT1-218ENST00000569732 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
CNOT1-218ENST00000569732 TTBK1Q5TCY1 1321 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-218ENST00000569732 DISP1Q96F81 1524 aa12.28□□□□□ -0.44
CNOT1-218ENST00000569732 HECW2Q9P2P5 1572 aa12.28□□□□□ -0.44
CNOT1-218ENST00000569732 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.44
CNOT1-218ENST00000569732 ZCCHC11Q5TAX3 1644 aaKnown RBP12.26□□□□□ -0.45
CNOT1-218ENST00000569732 UGGT2Q9NYU1 1516 aa12.25□□□□□ -0.45
CNOT1-218ENST00000569732 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
CNOT1-218ENST00000569732 KIAA0556O60303 1618 aa12.22□□□□□ -0.45
CNOT1-218ENST00000569732 WDR7Q9Y4E6 1490 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms