RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 CUX1P39880 1505 aa8.43□□□□□ -1.06
CNOT1-211ENST00000567188 SLC24A1O60721 1099 aa8.43□□□□□ -1.06
CNOT1-211ENST00000567188 GOLGA3Q08378 1498 aa8.4□□□□□ -1.06
CNOT1-211ENST00000567188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.39□□□□□ -1.076e-7■■■■□ 20.8
CNOT1-211ENST00000567188 CARMIL1Q5VZK9 1371 aa8.39□□□□□ -1.07
CNOT1-211ENST00000567188 BCANQ96GW7 911 aa8.39□□□□□ -1.07
CNOT1-211ENST00000567188 ANP32EQ9BTT0 268 aa8.38□□□□□ -1.07
CNOT1-211ENST00000567188 BCL11AQ9H165 835 aa8.38□□□□□ -1.07
CNOT1-211ENST00000567188 SLC4A1APQ9BWU0 796 aaKnown RBP8.37□□□□□ -1.07
CNOT1-211ENST00000567188 SNAPC4Q5SXM2 1469 aa8.37□□□□□ -1.07
CNOT1-211ENST00000567188 LAMC3Q9Y6N6 1575 aa8.37□□□□□ -1.07
CNOT1-211ENST00000567188 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
CNOT1-211ENST00000567188 CEP162Q5TB80 1403 aa8.35□□□□□ -1.07
CNOT1-211ENST00000567188 TOPBP1Q92547 1522 aa8.35□□□□□ -1.07
CNOT1-211ENST00000567188 RAPGEF2Q9Y4G8 1499 aa8.34□□□□□ -1.07
CNOT1-211ENST00000567188 CYB5RLQ6IPT4 315 aa8.34□□□□□ -1.07
CNOT1-211ENST00000567188 GAPVD1Q14C86 1478 aa8.34□□□□□ -1.07
CNOT1-211ENST00000567188 URB2Q14146 1524 aaKnown RBP8.34□□□□□ -1.07
CNOT1-211ENST00000567188 CLIP1P30622 1438 aa8.33□□□□□ -1.08
CNOT1-211ENST00000567188 DIEXFQ68CQ4 756 aaKnown RBP8.33□□□□□ -1.08
CNOT1-211ENST00000567188 PBRM1Q86U86 1689 aa8.33□□□□□ -1.08
CNOT1-211ENST00000567188 DNMBPQ6XZF7 1577 aa8.33□□□□□ -1.08
CNOT1-211ENST00000567188 CFTRP13569 1480 aa8.32□□□□□ -1.08
CNOT1-211ENST00000567188 ARID4BQ4LE39 1312 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-211ENST00000567188 CDK11AQ9UQ88 783 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-211ENST00000567188 CHGAP10645 457 aaKnown RBP8.31□□□□□ -1.08
CNOT1-211ENST00000567188 FHOD3Q2V2M9 1422 aa8.31□□□□□ -1.08
CNOT1-211ENST00000567188 TOP2BQ02880 1626 aa8.31□□□□□ -1.08
CNOT1-211ENST00000567188 ZNF316A6NFI3 1004 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-211ENST00000567188 EIF5BO60841 1220 aaKnown RBP8.31□□□□□ -1.08
CNOT1-211ENST00000567188 MLECQ14165 292 aa8.3□□□□□ -1.08
CNOT1-211ENST00000567188 RRP7BPQ9NSQ0 103 aa8.29□□□□□ -1.08
CNOT1-211ENST00000567188 ZNF608Q9ULD9 1512 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-211ENST00000567188 POLA1P09884 1462 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-211ENST00000567188 PEG3Q9GZU2 1588 aa8.28□□□□□ -1.08
CNOT1-211ENST00000567188 PLEKHG5O94827 1062 aa8.27□□□□□ -1.09
CNOT1-211ENST00000567188 MTUS2Q5JR59 1369 aa8.27□□□□□ -1.09
CNOT1-211ENST00000567188 IFT140Q96RY7 1462 aa8.26□□□□□ -1.09
CNOT1-211ENST00000567188 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
CNOT1-211ENST00000567188 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
CNOT1-211ENST00000567188 BIVM-ERCC5R4GMW8 1640 aa8.24□□□□□ -1.09
CNOT1-211ENST00000567188 NCLP19338 710 aaKnown RBP8.23□□□□□ -1.09
CNOT1-211ENST00000567188 ERICH6BQ5W0A0 696 aa8.23□□□□□ -1.09
CNOT1-211ENST00000567188 SCAF1Q9H7N4 1312 aaKnown RBP8.23□□□□□ -1.09
CNOT1-211ENST00000567188 STAG3Q9UJ98 1225 aa8.23□□□□□ -1.09
CNOT1-211ENST00000567188 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
CNOT1-211ENST00000567188 EIF4G3O43432 1585 aaKnown RBP8.22□□□□□ -1.09
CNOT1-211ENST00000567188 ANP32AP39687 249 aaKnown RBP8.22□□□□□ -1.09
CNOT1-211ENST00000567188 KANK4Q5T7N3 995 aaPredicted RBP8.21□□□□□ -1.1
CNOT1-211ENST00000567188 JPH4Q96JJ6 628 aa8.21□□□□□ -1.1
CNOT1-211ENST00000567188 GRIN2BQ13224 1484 aa8.2□□□□□ -1.1
CNOT1-211ENST00000567188 TNIKQ9UKE5 1360 aa8.19□□□□□ -1.1
CNOT1-211ENST00000567188 CARMIL2Q6F5E8 1435 aa8.19□□□□□ -1.1
CNOT1-211ENST00000567188 IGF1RP08069 1367 aa8.18□□□□□ -1.1
CNOT1-211ENST00000567188 TNNT2P45379 298 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-211ENST00000567188 HNRNPMP52272 730 aaKnown RBP eCLIP8.18□□□□□ -1.14e-6■■□□□ 11.9
CNOT1-211ENST00000567188 PRG4Q92954 1404 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-211ENST00000567188 CTTNBP2Q8WZ74 1663 aa8.18□□□□□ -1.1
CNOT1-211ENST00000567188 KDM2AQ9Y2K7 1162 aa8.18□□□□□ -1.1
CNOT1-211ENST00000567188 CHD1O14646 1710 aa8.18□□□□□ -1.1
CNOT1-211ENST00000567188 EEA1Q15075 1411 aa8.17□□□□□ -1.1
CNOT1-211ENST00000567188 CFDP1Q9UEE9 299 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-211ENST00000567188 THOC2Q8NI27 1593 aaKnown RBP8.15□□□□□ -1.1
CNOT1-211ENST00000567188 WDR62O43379 1518 aa8.15□□□□□ -1.11
CNOT1-211ENST00000567188 CUL7Q14999 1698 aa8.14□□□□□ -1.11
CNOT1-211ENST00000567188 FHAD1B1AJZ9 1412 aa8.14□□□□□ -1.11
CNOT1-211ENST00000567188 FOXD1Q16676 465 aa8.14□□□□□ -1.11
CNOT1-211ENST00000567188 NUTM2DQ5VT03 806 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-211ENST00000567188 CCNB3Q8WWL7 1395 aa8.13□□□□□ -1.11
CNOT1-211ENST00000567188 FAM69CQ0P6D2 419 aa8.13□□□□□ -1.11
CNOT1-211ENST00000567188 HIRIP3Q9BW71 556 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-211ENST00000567188 TRIM44Q96DX7 344 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-211ENST00000567188 ZBTB7CA1YPR0 619 aa8.12□□□□□ -1.11
CNOT1-211ENST00000567188 KIF21BO75037 1637 aa8.12□□□□□ -1.11
CNOT1-211ENST00000567188 CDK13Q14004 1512 aaKnown RBP8.11□□□□□ -1.11
CNOT1-211ENST00000567188 PTPRGP23470 1445 aa8.11□□□□□ -1.11
CNOT1-211ENST00000567188 ANP32BQ92688 251 aaKnown RBP8.11□□□□□ -1.11
CNOT1-211ENST00000567188 ARHGAP35Q9NRY4 1499 aa8.1□□□□□ -1.11
CNOT1-211ENST00000567188 RGL3Q3MIN7 710 aa8.09□□□□□ -1.11
CNOT1-211ENST00000567188 PCF11O94913 1555 aaKnown RBP8.09□□□□□ -1.11
CNOT1-211ENST00000567188 SYNJ2O15056 1496 aa8.09□□□□□ -1.11
CNOT1-211ENST00000567188 ADAMTS12P58397 1594 aa8.09□□□□□ -1.11
CNOT1-211ENST00000567188 IQGAP2Q13576 1575 aa8.09□□□□□ -1.11
CNOT1-211ENST00000567188 ABCA10Q8WWZ4 1543 aa8.09□□□□□ -1.11
CNOT1-211ENST00000567188 PRKCSHP14314 528 aaPredicted RBP8.09□□□□□ -1.12
CNOT1-211ENST00000567188 TSPY4P0CV99 314 aa8.08□□□□□ -1.12
CNOT1-211ENST00000567188 TSPY10P0CW01 314 aa8.08□□□□□ -1.12
CNOT1-211ENST00000567188 CEP170Q5SW79 1584 aa8.08□□□□□ -1.12
CNOT1-211ENST00000567188 ARAP1Q96P48 1450 aa8.08□□□□□ -1.12
CNOT1-211ENST00000567188 GRIN2AQ12879 1464 aa8.08□□□□□ -1.12
CNOT1-211ENST00000567188 GGT6Q6P531 493 aa8.08□□□□□ -1.12
CNOT1-211ENST00000567188 ARHGAP5Q13017 1502 aa8.07□□□□□ -1.12
CNOT1-211ENST00000567188 TSPOAP1O95153 1857 aa8.07□□□□□ -1.12
CNOT1-211ENST00000567188 TARBP1Q13395 1621 aaKnown RBP8.04□□□□□ -1.12
CNOT1-211ENST00000567188 ERICH3Q5RHP9 1530 aa8.04□□□□□ -1.12
CNOT1-211ENST00000567188 HECW1Q76N89 1606 aa8.04□□□□□ -1.12
CNOT1-211ENST00000567188 ZNF644Q9H582 1327 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-211ENST00000567188 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-211ENST00000567188 AEBP2Q6ZN18 517 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-211ENST00000567188 PPP1R15AO75807 674 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms