RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 PLCD3Q8N3E9 789 aa4.03□□□□□ -1.76
SUB1P4-201ENST00000566062 SPOCK2Q92563 424 aa4.03□□□□□ -1.76
SUB1P4-201ENST00000566062 CFAP44Q96MT7 982 aa4.03□□□□□ -1.76
SUB1P4-201ENST00000566062 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.03□□□□□ -1.76
SUB1P4-201ENST00000566062 PITPNM1O00562 1244 aa4.02□□□□□ -1.77
SUB1P4-201ENST00000566062 PRKCSHP14314 528 aaPredicted RBP4.02□□□□□ -1.77
SUB1P4-201ENST00000566062 MIER1Q8N108 512 aa4.02□□□□□ -1.77
SUB1P4-201ENST00000566062 FXR2P51116 673 aaKnown RBP eCLIP4.01□□□□□ -1.77
SUB1P4-201ENST00000566062 BCANQ96GW7 911 aa4.01□□□□□ -1.77
SUB1P4-201ENST00000566062 VSIG10Q8N0Z9 540 aa4□□□□□ -1.77
SUB1P4-201ENST00000566062 BBXQ8WY36 941 aaPredicted RBP3.99□□□□□ -1.77
SUB1P4-201ENST00000566062 CIZ1Q9ULV3 898 aaPredicted RBP3.99□□□□□ -1.77
SUB1P4-201ENST00000566062 NPM1P06748 294 aaKnown RBP eCLIP3.98□□□□□ -1.77
SUB1P4-201ENST00000566062 PRR29P0C7W0 189 aa3.98□□□□□ -1.77
SUB1P4-201ENST00000566062 POTEB2H3BUK9 544 aa3.97□□□□□ -1.77
SUB1P4-201ENST00000566062 RGL2O15211 777 aa3.97□□□□□ -1.77
SUB1P4-201ENST00000566062 TAOK2Q9UL54 1235 aa3.96□□□□□ -1.78
SUB1P4-201ENST00000566062 CLEC11AQ9Y240 323 aa3.96□□□□□ -1.78
SUB1P4-201ENST00000566062 KDM2AQ9Y2K7 1162 aa3.96□□□□□ -1.78
SUB1P4-201ENST00000566062 PLEKHG5O94827 1062 aa3.95□□□□□ -1.78
SUB1P4-201ENST00000566062 SPRYD3Q8NCJ5 442 aa3.95□□□□□ -1.78
SUB1P4-201ENST00000566062 TSHZ2Q9NRE2 1034 aa3.95□□□□□ -1.78
SUB1P4-201ENST00000566062 CHGAP10645 457 aaKnown RBP3.94□□□□□ -1.78
SUB1P4-201ENST00000566062 TPRNQ4KMQ1 711 aa3.94□□□□□ -1.78
SUB1P4-201ENST00000566062 ZBTB47Q9UFB7 747 aaPredicted RBP3.94□□□□□ -1.78
SUB1P4-201ENST00000566062 PRKAR2AP13861 404 aaKnown RBP3.92□□□□□ -1.78
SUB1P4-201ENST00000566062 CLCN6P51797 869 aa3.91□□□□□ -1.78
SUB1P4-201ENST00000566062 CREBZFQ9NS37 354 aa3.91□□□□□ -1.78
SUB1P4-201ENST00000566062 DCAF8Q5TAQ9 597 aa3.89□□□□□ -1.79
SUB1P4-201ENST00000566062 FARP1Q9Y4F1 1045 aaPredicted RBP3.89□□□□□ -1.79
SUB1P4-201ENST00000566062 MNX1P50219 401 aaPredicted RBP3.88□□□□□ -1.79
SUB1P4-201ENST00000566062 C19orf67A6NJJ6 358 aa3.87□□□□□ -1.79
SUB1P4-201ENST00000566062 NBR1Q14596 966 aa3.86□□□□□ -1.79
SUB1P4-201ENST00000566062 GSE1Q14687 1217 aa3.85□□□□□ -1.79
SUB1P4-201ENST00000566062 CHADLQ6NUI6 762 aa3.84□□□□□ -1.79
SUB1P4-201ENST00000566062 TRIM41Q8WV44 630 aa3.84□□□□□ -1.79
SUB1P4-201ENST00000566062 PAK3O75914 559 aaPredicted RBP3.83□□□□□ -1.8
SUB1P4-201ENST00000566062 HS6ST3Q8IZP7 471 aa3.83□□□□□ -1.8
SUB1P4-201ENST00000566062 STK25O00506 426 aa3.82□□□□□ -1.8
SUB1P4-201ENST00000566062 DCBLD2Q96PD2 775 aa3.82□□□□□ -1.8
SUB1P4-201ENST00000566062 RIOK3O14730 519 aaKnown RBP3.81□□□□□ -1.8
SUB1P4-201ENST00000566062 CD44P16070 742 aaKnown RBP3.81□□□□□ -1.8
SUB1P4-201ENST00000566062 NUBP1P53384 320 aa3.81□□□□□ -1.8
SUB1P4-201ENST00000566062 ZNF579Q8NAF0 562 aaKnown RBP3.81□□□□□ -1.8
SUB1P4-201ENST00000566062 RNF25Q96BH1 459 aaPredicted RBP3.81□□□□□ -1.8
SUB1P4-201ENST00000566062 FAM212AQ96EL1 285 aa3.8□□□□□ -1.8
SUB1P4-201ENST00000566062 SGIP1Q9BQI5 828 aa3.8□□□□□ -1.8
SUB1P4-201ENST00000566062 STK24Q9Y6E0 443 aa3.8□□□□□ -1.8
SUB1P4-201ENST00000566062 NKX1-1Q15270 411 aaPredicted RBP3.79□□□□□ -1.8
SUB1P4-201ENST00000566062 VGFO15240 615 aaPredicted RBP3.78□□□□□ -1.8
SUB1P4-201ENST00000566062 GTPBP6O43824 516 aaPredicted RBP3.78□□□□□ -1.8
SUB1P4-201ENST00000566062 PYGBP11216 843 aa3.78□□□□□ -1.8
SUB1P4-201ENST00000566062 CHRM1P11229 460 aaPredicted RBP3.78□□□□□ -1.8
SUB1P4-201ENST00000566062 BCL11BQ9C0K0 894 aaPredicted RBP3.78□□□□□ -1.8
SUB1P4-201ENST00000566062 ZRANB1Q9UGI0 708 aa3.77□□□□□ -1.81
SUB1P4-201ENST00000566062 CCDC61Q9Y6R9 512 aa3.77□□□□□ -1.81
SUB1P4-201ENST00000566062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.76□□□□□ -1.81
SUB1P4-201ENST00000566062 RASEFQ8IZ41 740 aa3.76□□□□□ -1.81
SUB1P4-201ENST00000566062 ZFP91Q96JP5 570 aaPredicted RBP3.76□□□□□ -1.81
SUB1P4-201ENST00000566062 DNAJC5Q9H3Z4 198 aa3.75□□□□□ -1.81
SUB1P4-201ENST00000566062 TSPYL2Q9H2G4 693 aaPredicted RBP3.74□□□□□ -1.81
SUB1P4-201ENST00000566062 WDR70Q9NW82 654 aa3.74□□□□□ -1.81
SUB1P4-201ENST00000566062 KIF12Q96FN5 646 aa3.73□□□□□ -1.81
SUB1P4-201ENST00000566062 TULP1O00294 542 aaPredicted RBP3.72□□□□□ -1.81
SUB1P4-201ENST00000566062 RYDENQ9NUL5 291 aaKnown RBP3.72□□□□□ -1.81
SUB1P4-201ENST00000566062 ZNF467Q7Z7K2 595 aaPredicted RBP3.71□□□□□ -1.82
SUB1P4-201ENST00000566062 GTF3C3Q9Y5Q9 886 aa3.71□□□□□ -1.82
SUB1P4-201ENST00000566062 TIE1P35590 1138 aa3.7□□□□□ -1.82
SUB1P4-201ENST00000566062 PCDHB8Q9UN66 801 aa3.7□□□□□ -1.82
SUB1P4-201ENST00000566062 PCDHB13Q9Y5F0 798 aa3.7□□□□□ -1.82
SUB1P4-201ENST00000566062 MAP3K13O43283 966 aa3.69□□□□□ -1.82
SUB1P4-201ENST00000566062 ASTLQ6HA08 431 aaPredicted RBP3.69□□□□□ -1.82
SUB1P4-201ENST00000566062 PHF12Q96QT6 1004 aa3.69□□□□□ -1.82
SUB1P4-201ENST00000566062 TIMELESSQ9UNS1 1208 aa3.69□□□□□ -1.82
SUB1P4-201ENST00000566062 CADPS2Q86UW7 1296 aa3.68□□□□□ -1.82
SUB1P4-201ENST00000566062 P3H3Q8IVL6 736 aa3.68□□□□□ -1.82
SUB1P4-201ENST00000566062 PSEN1P49768 467 aa3.67□□□□□ -1.82
SUB1P4-201ENST00000566062 PDAP1Q13442 181 aaKnown RBP3.67□□□□□ -1.82
SUB1P4-201ENST00000566062 IER5LQ5T953 404 aa3.67□□□□□ -1.82
SUB1P4-201ENST00000566062 LMOD2Q6P5Q4 547 aa3.67□□□□□ -1.82
SUB1P4-201ENST00000566062 MS4A3Q96HJ5 214 aa3.67□□□□□ -1.82
SUB1P4-201ENST00000566062 GALR2O43603 387 aaPredicted RBP3.66□□□□□ -1.82
SUB1P4-201ENST00000566062 KCNV2Q8TDN2 545 aa3.66□□□□□ -1.82
SUB1P4-201ENST00000566062 ATMINO43313 823 aaPredicted RBP3.65□□□□□ -1.83
SUB1P4-201ENST00000566062 C7P10643 843 aa3.65□□□□□ -1.83
SUB1P4-201ENST00000566062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.65□□□□□ -1.83
SUB1P4-201ENST00000566062 IFNL1Q8IU54 200 aa3.65□□□□□ -1.83
SUB1P4-201ENST00000566062 PPP1R37O75864 691 aa3.64□□□□□ -1.83
SUB1P4-201ENST00000566062 TMEM132AQ24JP5 1023 aa3.64□□□□□ -1.83
SUB1P4-201ENST00000566062 MAMSTRQ6ZN01 415 aa3.64□□□□□ -1.83
SUB1P4-201ENST00000566062 C14orf37Q86TY3 774 aa3.64□□□□□ -1.83
SUB1P4-201ENST00000566062 SLC39A7Q92504 469 aa3.64□□□□□ -1.83
SUB1P4-201ENST00000566062 TTLL13PA6NNM8 815 aa3.63□□□□□ -1.83
SUB1P4-201ENST00000566062 EFCAB3Q8N7B9 438 aa3.63□□□□□ -1.83
SUB1P4-201ENST00000566062 MFRPQ9BY79 579 aa3.63□□□□□ -1.83
SUB1P4-201ENST00000566062 CABP2Q9NPB3 220 aa3.63□□□□□ -1.83
SUB1P4-201ENST00000566062 BMP2KQ9NSY1 1161 aaPredicted RBP3.63□□□□□ -1.83
SUB1P4-201ENST00000566062 POTEJP0CG39 1038 aa3.62□□□□□ -1.83
SUB1P4-201ENST00000566062 NLRP6P59044 892 aa3.62□□□□□ -1.83
SUB1P4-201ENST00000566062 PHF8Q9UPP1 1060 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms