RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
TCF4-229ENST00000565580 ABCC8Q09428 1581 aa11.64□□□□□ -0.55
TCF4-229ENST00000565580 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
TCF4-229ENST00000565580 EIF4G3O43432 1585 aaKnown RBP11.6□□□□□ -0.55
TCF4-229ENST00000565580 TARBP1Q13395 1621 aaKnown RBP11.59□□□□□ -0.55
TCF4-229ENST00000565580 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
TCF4-229ENST00000565580 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.56
TCF4-229ENST00000565580 ZBTB22O15209 634 aa11.57□□□□□ -0.56
TCF4-229ENST00000565580 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
TCF4-229ENST00000565580 RAD54L2Q9Y4B4 1467 aa11.56□□□□□ -0.56
TCF4-229ENST00000565580 REM2Q8IYK8 340 aaPredicted RBP11.55□□□□□ -0.56
TCF4-229ENST00000565580 CUX1P39880 1505 aa11.54□□□□□ -0.56
TCF4-229ENST00000565580 SOGA1O94964 1423 aa11.52□□□□□ -0.56
TCF4-229ENST00000565580 FGD5Q6ZNL6 1462 aa11.52□□□□□ -0.56
TCF4-229ENST00000565580 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
TCF4-229ENST00000565580 RIMBP3CA6NJZ7 1639 aa11.5□□□□□ -0.57
TCF4-229ENST00000565580 RIMBP3BA6NNM3 1639 aa11.5□□□□□ -0.57
TCF4-229ENST00000565580 RIMBP3Q9UFD9 1639 aa11.5□□□□□ -0.57
TCF4-229ENST00000565580 CHD1O14646 1710 aa11.49□□□□□ -0.57
TCF4-229ENST00000565580 FBLN2P98095 1184 aa11.49□□□□□ -0.57
TCF4-229ENST00000565580 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
TCF4-229ENST00000565580 SNAPC4Q5SXM2 1469 aa11.45□□□□□ -0.58
TCF4-229ENST00000565580 WDR97A6NE52 1622 aa11.44□□□□□ -0.58
TCF4-229ENST00000565580 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
TCF4-229ENST00000565580 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
TCF4-229ENST00000565580 SPDYE2Q495Y8 402 aa11.43□□□□□ -0.58
TCF4-229ENST00000565580 GRIN2BQ13224 1484 aa11.41□□□□□ -0.58
TCF4-229ENST00000565580 PIP4P2Q8N4L2 257 aa11.41□□□□□ -0.58
TCF4-229ENST00000565580 MAGI1Q96QZ7 1491 aaPredicted RBP11.4□□□□□ -0.58
TCF4-229ENST00000565580 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
TCF4-229ENST00000565580 ABCA10Q8WWZ4 1543 aa11.39□□□□□ -0.59
TCF4-229ENST00000565580 GAPVD1Q14C86 1478 aa11.38□□□□□ -0.59
TCF4-229ENST00000565580 CYB5RLQ6IPT4 315 aa11.38□□□□□ -0.59
TCF4-229ENST00000565580 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
TCF4-229ENST00000565580 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
TCF4-229ENST00000565580 PBRM1Q86U86 1689 aa11.37□□□□□ -0.59
TCF4-229ENST00000565580 CLASP1Q7Z460 1538 aa11.37□□□□□ -0.59
TCF4-229ENST00000565580 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
TCF4-229ENST00000565580 ABCA5Q8WWZ7 1642 aa11.37□□□□□ -0.59
TCF4-229ENST00000565580 SYNJ2O15056 1496 aa11.37□□□□□ -0.59
TCF4-229ENST00000565580 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
TCF4-229ENST00000565580 SYNJ1O43426 1573 aa11.36□□□□□ -0.59
TCF4-229ENST00000565580 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
TCF4-229ENST00000565580 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
TCF4-229ENST00000565580 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
TCF4-229ENST00000565580 HAX1O00165 279 aa11.29□□□□□ -0.6
TCF4-229ENST00000565580 ADAMTS12P58397 1594 aa11.28□□□□□ -0.6
TCF4-229ENST00000565580 GRIN2AQ12879 1464 aa11.28□□□□□ -0.6
TCF4-229ENST00000565580 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
TCF4-229ENST00000565580 FHAD1B1AJZ9 1412 aa11.25□□□□□ -0.61
TCF4-229ENST00000565580 CEP170Q5SW79 1584 aa11.24□□□□□ -0.61
TCF4-229ENST00000565580 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
TCF4-229ENST00000565580 NUP160Q12769 1436 aa11.24□□□□□ -0.61
TCF4-229ENST00000565580 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
TCF4-229ENST00000565580 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
TCF4-229ENST00000565580 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
TCF4-229ENST00000565580 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
TCF4-229ENST00000565580 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
TCF4-229ENST00000565580 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
TCF4-229ENST00000565580 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
TCF4-229ENST00000565580 IGF1RP08069 1367 aa11.13□□□□□ -0.63
TCF4-229ENST00000565580 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
TCF4-229ENST00000565580 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
TCF4-229ENST00000565580 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
TCF4-229ENST00000565580 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
TCF4-229ENST00000565580 CUL7Q14999 1698 aa11.08□□□□□ -0.64
TCF4-229ENST00000565580 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
TCF4-229ENST00000565580 CARMIL1Q5VZK9 1371 aa11.04□□□□□ -0.64
TCF4-229ENST00000565580 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
TCF4-229ENST00000565580 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
TCF4-229ENST00000565580 ADCY10Q96PN6 1610 aa10.99□□□□□ -0.65
TCF4-229ENST00000565580 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
TCF4-229ENST00000565580 EVX2Q03828 476 aa10.99□□□□□ -0.65
TCF4-229ENST00000565580 KIF13AQ9H1H9 1805 aa10.98□□□□□ -0.65
TCF4-229ENST00000565580 IQGAP2Q13576 1575 aa10.96□□□□□ -0.65
TCF4-229ENST00000565580 MAPKBP1O60336 1514 aa10.95□□□□□ -0.66
TCF4-229ENST00000565580 PTPRGP23470 1445 aa10.95□□□□□ -0.66
TCF4-229ENST00000565580 TTBK1Q5TCY1 1321 aaPredicted RBP10.95□□□□□ -0.66
TCF4-229ENST00000565580 NPM1P06748 294 aaKnown RBP eCLIP10.95□□□□□ -0.66
TCF4-229ENST00000565580 ABCC10Q5T3U5 1492 aa10.94□□□□□ -0.66
TCF4-229ENST00000565580 RAPGEF2Q9Y4G8 1499 aa10.94□□□□□ -0.66
TCF4-229ENST00000565580 TNIKQ9UKE5 1360 aa10.93□□□□□ -0.66
TCF4-229ENST00000565580 FAM69CQ0P6D2 419 aa10.93□□□□□ -0.66
TCF4-229ENST00000565580 DISP1Q96F81 1524 aa10.93□□□□□ -0.66
TCF4-229ENST00000565580 CARMIL2Q6F5E8 1435 aa10.92□□□□□ -0.66
TCF4-229ENST00000565580 DIP2BQ9P265 1576 aa10.92□□□□□ -0.66
TCF4-229ENST00000565580 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
TCF4-229ENST00000565580 UGGT2Q9NYU1 1516 aa10.89□□□□□ -0.67
TCF4-229ENST00000565580 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
TCF4-229ENST00000565580 UACAQ9BZF9 1416 aa10.87□□□□□ -0.67
TCF4-229ENST00000565580 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
TCF4-229ENST00000565580 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
TCF4-229ENST00000565580 PRXQ9BXM0 1461 aa10.86□□□□□ -0.67
TCF4-229ENST00000565580 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
TCF4-229ENST00000565580 GABBR2O75899 941 aa10.84□□□□□ -0.67
TCF4-229ENST00000565580 CLCN6P51797 869 aa10.84□□□□□ -0.67
TCF4-229ENST00000565580 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
TCF4-229ENST00000565580 CTTNBP2Q8WZ74 1663 aa10.84□□□□□ -0.67
TCF4-229ENST00000565580 TSPOAP1O95153 1857 aa10.84□□□□□ -0.67
TCF4-229ENST00000565580 KDM5BQ9UGL1 1544 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms