RNA–Protein interactions for RNA: ENST00000564061.5

POLR3E-208, Transcript of RNA polymerase III subunit E, humanhuman

TSL 1 (best)

Gene POLR3E, Length 4,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-208ENST00000564061 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
POLR3E-208ENST00000564061 KDM2AQ9Y2K7 1162 aa17.18■□□□□ 0.34
POLR3E-208ENST00000564061 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
POLR3E-208ENST00000564061 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.33
POLR3E-208ENST00000564061 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
POLR3E-208ENST00000564061 NBR1Q14596 966 aa17.12■□□□□ 0.33
POLR3E-208ENST00000564061 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
POLR3E-208ENST00000564061 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
POLR3E-208ENST00000564061 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
POLR3E-208ENST00000564061 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
POLR3E-208ENST00000564061 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
POLR3E-208ENST00000564061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.336e-7■□□□□ 10.3
POLR3E-208ENST00000564061 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
POLR3E-208ENST00000564061 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
POLR3E-208ENST00000564061 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
POLR3E-208ENST00000564061 CUX2O14529 1486 aa17.03■□□□□ 0.32
POLR3E-208ENST00000564061 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.32
POLR3E-208ENST00000564061 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.32
POLR3E-208ENST00000564061 ANP32EQ9BTT0 268 aa17.02■□□□□ 0.31
POLR3E-208ENST00000564061 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
POLR3E-208ENST00000564061 FOXD1Q16676 465 aa16.98■□□□□ 0.31
POLR3E-208ENST00000564061 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
POLR3E-208ENST00000564061 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.31
POLR3E-208ENST00000564061 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
POLR3E-208ENST00000564061 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
POLR3E-208ENST00000564061 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
POLR3E-208ENST00000564061 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
POLR3E-208ENST00000564061 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
POLR3E-208ENST00000564061 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
POLR3E-208ENST00000564061 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
POLR3E-208ENST00000564061 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
POLR3E-208ENST00000564061 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
POLR3E-208ENST00000564061 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
POLR3E-208ENST00000564061 RBM19Q9Y4C8 960 aaKnown RBP16.89■□□□□ 0.29
POLR3E-208ENST00000564061 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
POLR3E-208ENST00000564061 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
POLR3E-208ENST00000564061 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
POLR3E-208ENST00000564061 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
POLR3E-208ENST00000564061 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
POLR3E-208ENST00000564061 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
POLR3E-208ENST00000564061 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
POLR3E-208ENST00000564061 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
POLR3E-208ENST00000564061 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
POLR3E-208ENST00000564061 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
POLR3E-208ENST00000564061 FHOD3Q2V2M9 1422 aa16.79■□□□□ 0.28
POLR3E-208ENST00000564061 ARHGAP35Q9NRY4 1499 aa16.79■□□□□ 0.28
POLR3E-208ENST00000564061 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
POLR3E-208ENST00000564061 PLEKHD1A6NEE1 506 aa16.78■□□□□ 0.28
POLR3E-208ENST00000564061 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
POLR3E-208ENST00000564061 ARXQ96QS3 562 aa16.75■□□□□ 0.27
POLR3E-208ENST00000564061 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
POLR3E-208ENST00000564061 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
POLR3E-208ENST00000564061 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
POLR3E-208ENST00000564061 L3MBTL2Q969R5 705 aa16.72■□□□□ 0.27
POLR3E-208ENST00000564061 CC2D1BQ5T0F9 858 aaKnown RBP16.71■□□□□ 0.27
POLR3E-208ENST00000564061 DCAF11Q8TEB1 546 aa16.71■□□□□ 0.27
POLR3E-208ENST00000564061 EIF5BO60841 1220 aaKnown RBP16.7■□□□□ 0.26
POLR3E-208ENST00000564061 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
POLR3E-208ENST00000564061 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
POLR3E-208ENST00000564061 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
POLR3E-208ENST00000564061 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
POLR3E-208ENST00000564061 KIF21BO75037 1637 aa16.66■□□□□ 0.26
POLR3E-208ENST00000564061 PKD2Q13563 968 aa16.66■□□□□ 0.26
POLR3E-208ENST00000564061 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.63■□□□□ 0.25
POLR3E-208ENST00000564061 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
POLR3E-208ENST00000564061 NEFMP07197 916 aa16.63■□□□□ 0.25
POLR3E-208ENST00000564061 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
POLR3E-208ENST00000564061 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
POLR3E-208ENST00000564061 RGS3P49796 1198 aa16.6■□□□□ 0.25
POLR3E-208ENST00000564061 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
POLR3E-208ENST00000564061 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
POLR3E-208ENST00000564061 IGF1RP08069 1367 aa16.59■□□□□ 0.25
POLR3E-208ENST00000564061 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
POLR3E-208ENST00000564061 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
POLR3E-208ENST00000564061 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.24
POLR3E-208ENST00000564061 FMN1Q68DA7 1419 aa16.58■□□□□ 0.24
POLR3E-208ENST00000564061 UPF2Q9HAU5 1272 aaKnown RBP16.58■□□□□ 0.24
POLR3E-208ENST00000564061 ARAP1Q96P48 1450 aa16.57■□□□□ 0.24
POLR3E-208ENST00000564061 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
POLR3E-208ENST00000564061 HSP90AA1P07900 732 aaKnown RBP16.55■□□□□ 0.24
POLR3E-208ENST00000564061 TOP2BQ02880 1626 aa16.55■□□□□ 0.24
POLR3E-208ENST00000564061 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
POLR3E-208ENST00000564061 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
POLR3E-208ENST00000564061 DEKP35659 375 aaKnown RBP16.52■□□□□ 0.23
POLR3E-208ENST00000564061 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
POLR3E-208ENST00000564061 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
POLR3E-208ENST00000564061 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
POLR3E-208ENST00000564061 NUP155O75694 1391 aa16.49■□□□□ 0.23
POLR3E-208ENST00000564061 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
POLR3E-208ENST00000564061 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
POLR3E-208ENST00000564061 CFTRP13569 1480 aa16.46■□□□□ 0.23
POLR3E-208ENST00000564061 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
POLR3E-208ENST00000564061 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
POLR3E-208ENST00000564061 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
POLR3E-208ENST00000564061 HNRNPMP52272 730 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■□□ 17.5
POLR3E-208ENST00000564061 DDRGK1Q96HY6 314 aa16.44■□□□□ 0.22
POLR3E-208ENST00000564061 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
POLR3E-208ENST00000564061 CUX1P39880 1505 aa16.44■□□□□ 0.22
POLR3E-208ENST00000564061 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
POLR3E-208ENST00000564061 ZNF644Q9H582 1327 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms