RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
LINC01416-201ENST00000563553 KIF12Q96FN5 646 aa9.5□□□□□ -0.89
LINC01416-201ENST00000563553 VASPP50552 380 aaPredicted RBP9.5□□□□□ -0.89
LINC01416-201ENST00000563553 DCBLD2Q96PD2 775 aa9.48□□□□□ -0.89
LINC01416-201ENST00000563553 PELP1Q8IZL8 1130 aaKnown RBP9.47□□□□□ -0.89
LINC01416-201ENST00000563553 TRPC6Q9Y210 931 aa9.46□□□□□ -0.9
LINC01416-201ENST00000563553 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
LINC01416-201ENST00000563553 MAP3K13O43283 966 aa9.45□□□□□ -0.9
LINC01416-201ENST00000563553 LHX8Q68G74 356 aa9.43□□□□□ -0.9
LINC01416-201ENST00000563553 ASTLQ6HA08 431 aaPredicted RBP9.43□□□□□ -0.9
LINC01416-201ENST00000563553 ATMINO43313 823 aaPredicted RBP9.4□□□□□ -0.9
LINC01416-201ENST00000563553 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
LINC01416-201ENST00000563553 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
LINC01416-201ENST00000563553 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
LINC01416-201ENST00000563553 BMP2KQ9NSY1 1161 aaPredicted RBP9.37□□□□□ -0.91
LINC01416-201ENST00000563553 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
LINC01416-201ENST00000563553 IFNL1Q8IU54 200 aa9.34□□□□□ -0.91
LINC01416-201ENST00000563553 SGIP1Q9BQI5 828 aa9.33□□□□□ -0.92
LINC01416-201ENST00000563553 PCDHB13Q9Y5F0 798 aa9.33□□□□□ -0.92
LINC01416-201ENST00000563553 PYGBP11216 843 aa9.31□□□□□ -0.92
LINC01416-201ENST00000563553 TIE1P35590 1138 aa9.31□□□□□ -0.92
LINC01416-201ENST00000563553 POTEFA5A3E0 1075 aa9.31□□□□□ -0.92
LINC01416-201ENST00000563553 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
LINC01416-201ENST00000563553 KLHL34Q8N239 644 aa9.31□□□□□ -0.92
LINC01416-201ENST00000563553 POTEJP0CG39 1038 aa9.3□□□□□ -0.92
LINC01416-201ENST00000563553 DCAF8Q5TAQ9 597 aa9.3□□□□□ -0.92
LINC01416-201ENST00000563553 METRNQ9UJH8 293 aa9.3□□□□□ -0.92
LINC01416-201ENST00000563553 OTUD5Q96G74 571 aa9.26□□□□□ -0.93
LINC01416-201ENST00000563553 SLC39A7Q92504 469 aa9.26□□□□□ -0.93
LINC01416-201ENST00000563553 C7P10643 843 aa9.25□□□□□ -0.93
LINC01416-201ENST00000563553 SPOCK2Q92563 424 aa9.24□□□□□ -0.93
LINC01416-201ENST00000563553 PCDHB8Q9UN66 801 aa9.24□□□□□ -0.93
LINC01416-201ENST00000563553 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
LINC01416-201ENST00000563553 GSE1Q14687 1217 aa9.22□□□□□ -0.93
LINC01416-201ENST00000563553 COLQQ9Y215 455 aaPredicted RBP9.22□□□□□ -0.93
LINC01416-201ENST00000563553 CHRM1P11229 460 aaPredicted RBP9.2□□□□□ -0.94
LINC01416-201ENST00000563553 TMEM106CQ9BVX2 250 aa9.2□□□□□ -0.94
LINC01416-201ENST00000563553 IER5LQ5T953 404 aa9.15□□□□□ -0.95
LINC01416-201ENST00000563553 PLSCR2Q9NRY7 297 aa9.13□□□□□ -0.95
LINC01416-201ENST00000563553 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
LINC01416-201ENST00000563553 IRX5P78411 483 aaPredicted RBP9.13□□□□□ -0.95
LINC01416-201ENST00000563553 ZNF467Q7Z7K2 595 aaPredicted RBP9.12□□□□□ -0.95
LINC01416-201ENST00000563553 RNF25Q96BH1 459 aaPredicted RBP9.08□□□□□ -0.96
LINC01416-201ENST00000563553 SEC24BO95487 1268 aa9.06□□□□□ -0.96
LINC01416-201ENST00000563553 PSEN1P49768 467 aa9.06□□□□□ -0.96
LINC01416-201ENST00000563553 PDCD7Q8N8D1 485 aaKnown RBP9.05□□□□□ -0.96
LINC01416-201ENST00000563553 PDAP1Q13442 181 aaKnown RBP9.04□□□□□ -0.96
LINC01416-201ENST00000563553 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
LINC01416-201ENST00000563553 ILDR1Q86SU0 546 aaPredicted RBP9.03□□□□□ -0.96
LINC01416-201ENST00000563553 MAMSTRQ6ZN01 415 aa9.02□□□□□ -0.97
LINC01416-201ENST00000563553 OCEL1Q9H607 264 aa9.02□□□□□ -0.97
LINC01416-201ENST00000563553 PLCG2P16885 1265 aa9□□□□□ -0.97
LINC01416-201ENST00000563553 TRIM41Q8WV44 630 aa9□□□□□ -0.97
LINC01416-201ENST00000563553 SCUBE2Q9NQ36 999 aa9□□□□□ -0.97
LINC01416-201ENST00000563553 CABP2Q9NPB3 220 aa8.96□□□□□ -0.97
LINC01416-201ENST00000563553 PKD2Q13563 968 aa8.95□□□□□ -0.98
LINC01416-201ENST00000563553 RIOK3O14730 519 aaKnown RBP8.94□□□□□ -0.98
LINC01416-201ENST00000563553 MKRN3Q13064 507 aaKnown RBP8.94□□□□□ -0.98
LINC01416-201ENST00000563553 DPY19L2Q6NUT2 758 aa8.93□□□□□ -0.98
LINC01416-201ENST00000563553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.93□□□□□ -0.98
LINC01416-201ENST00000563553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.91□□□□□ -0.98
LINC01416-201ENST00000563553 GOLGA2Q08379 1002 aa8.91□□□□□ -0.98
LINC01416-201ENST00000563553 ZFP91Q96JP5 570 aaPredicted RBP8.91□□□□□ -0.98
LINC01416-201ENST00000563553 EFCAB3Q8N7B9 438 aa8.91□□□□□ -0.98
LINC01416-201ENST00000563553 SLAIN1Q8ND83 568 aa8.89□□□□□ -0.99
LINC01416-201ENST00000563553 VGFO15240 615 aaPredicted RBP8.88□□□□□ -0.99
LINC01416-201ENST00000563553 POTEMA6NI47 508 aa8.87□□□□□ -0.99
LINC01416-201ENST00000563553 RGL2O15211 777 aa8.86□□□□□ -0.99
LINC01416-201ENST00000563553 POTEGQ6S5H5 508 aa8.86□□□□□ -0.99
LINC01416-201ENST00000563553 MS4A4AQ96JQ5 239 aa8.85□□□□□ -0.99
LINC01416-201ENST00000563553 ECM2O94769 699 aaPredicted RBP8.85□□□□□ -0.99
LINC01416-201ENST00000563553 FAM163AQ96GL9 167 aaPredicted RBP8.84□□□□□ -0.99
LINC01416-201ENST00000563553 L3MBTL3Q96JM7 780 aaPredicted RBP8.82□□□□□ -1
LINC01416-201ENST00000563553 TMEM121BQ9BXQ6 578 aaPredicted RBP8.82□□□□□ -1
LINC01416-201ENST00000563553 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
LINC01416-201ENST00000563553 BCL11BQ9C0K0 894 aaPredicted RBP8.81□□□□□ -1
LINC01416-201ENST00000563553 PHF8Q9UPP1 1060 aa8.8□□□□□ -1
LINC01416-201ENST00000563553 BOLA1Q9Y3E2 137 aa8.8□□□□□ -1
LINC01416-201ENST00000563553 ST18O60284 1047 aa8.8□□□□□ -1
LINC01416-201ENST00000563553 FBXO22Q8NEZ5 403 aa8.79□□□□□ -1
LINC01416-201ENST00000563553 C3orf67Q6ZVT6 689 aa8.78□□□□□ -1
LINC01416-201ENST00000563553 SOX12O15370 315 aa8.77□□□□□ -1
LINC01416-201ENST00000563553 MFRPQ9BY79 579 aa8.76□□□□□ -1.01
LINC01416-201ENST00000563553 TMEM92Q6UXU6 159 aa8.76□□□□□ -1.01
LINC01416-201ENST00000563553 STK24Q9Y6E0 443 aa8.75□□□□□ -1.01
LINC01416-201ENST00000563553 MICALL2Q8IY33 904 aa8.75□□□□□ -1.01
LINC01416-201ENST00000563553 STK25O00506 426 aa8.74□□□□□ -1.01
LINC01416-201ENST00000563553 PCDH10Q9P2E7 1040 aa8.71□□□□□ -1.01
LINC01416-201ENST00000563553 HOXB3P14651 431 aaPredicted RBP8.71□□□□□ -1.02
LINC01416-201ENST00000563553 TAOK2Q9UL54 1235 aa8.69□□□□□ -1.02
LINC01416-201ENST00000563553 NLRP6P59044 892 aa8.68□□□□□ -1.02
LINC01416-201ENST00000563553 MARVELD3Q96A59 401 aa8.67□□□□□ -1.02
LINC01416-201ENST00000563553 SNPHO15079 494 aa8.66□□□□□ -1.02
LINC01416-201ENST00000563553 G3V3G9 751 aa8.65□□□□□ -1.03
LINC01416-201ENST00000563553 HS6ST3Q8IZP7 471 aa8.64□□□□□ -1.03
LINC01416-201ENST00000563553 POTEB3A0JP26 581 aa8.64□□□□□ -1.03
LINC01416-201ENST00000563553 POTEBQ6S5H4 581 aa8.64□□□□□ -1.03
LINC01416-201ENST00000563553 PPP1R37O75864 691 aa8.63□□□□□ -1.03
LINC01416-201ENST00000563553 CDAN1Q8IWY9 1227 aa8.62□□□□□ -1.03
LINC01416-201ENST00000563553 KIF3CO14782 793 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms