RNA–Protein interactions for RNA: ENST00000563221.5

NAE1-210, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-210ENST00000563221 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
NAE1-210ENST00000563221 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
NAE1-210ENST00000563221 CFTRP13569 1480 aa14.46□□□□□ -0.09
NAE1-210ENST00000563221 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
NAE1-210ENST00000563221 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
NAE1-210ENST00000563221 PRKAR2AP13861 404 aaKnown RBP14.42□□□□□ -0.1
NAE1-210ENST00000563221 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
NAE1-210ENST00000563221 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
NAE1-210ENST00000563221 CHADLQ6NUI6 762 aa14.39□□□□□ -0.11
NAE1-210ENST00000563221 FANCD2Q9BXW9 1451 aa14.38□□□□□ -0.11
NAE1-210ENST00000563221 FKBP8Q14318 412 aa14.35□□□□□ -0.11
NAE1-210ENST00000563221 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
NAE1-210ENST00000563221 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
NAE1-210ENST00000563221 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
NAE1-210ENST00000563221 PROM2Q8N271 834 aa14.3□□□□□ -0.12
NAE1-210ENST00000563221 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
NAE1-210ENST00000563221 HAX1O00165 279 aa14.27□□□□□ -0.13
NAE1-210ENST00000563221 URB2Q14146 1524 aaKnown RBP14.26□□□□□ -0.13
NAE1-210ENST00000563221 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
NAE1-210ENST00000563221 WDR62O43379 1518 aa14.22□□□□□ -0.13
NAE1-210ENST00000563221 CUX2O14529 1486 aa14.22□□□□□ -0.13
NAE1-210ENST00000563221 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
NAE1-210ENST00000563221 TOPBP1Q92547 1522 aa14.16□□□□□ -0.14
NAE1-210ENST00000563221 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
NAE1-210ENST00000563221 EVX2Q03828 476 aa14.13□□□□□ -0.15
NAE1-210ENST00000563221 CUX1P39880 1505 aa14.13□□□□□ -0.15
NAE1-210ENST00000563221 ABCC8Q09428 1581 aa14.12□□□□□ -0.15
NAE1-210ENST00000563221 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
NAE1-210ENST00000563221 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
NAE1-210ENST00000563221 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
NAE1-210ENST00000563221 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
NAE1-210ENST00000563221 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
NAE1-210ENST00000563221 WRNQ14191 1432 aaPredicted RBP eCLIP14.05□□□□□ -0.16
NAE1-210ENST00000563221 FGD5Q6ZNL6 1462 aa14.05□□□□□ -0.16
NAE1-210ENST00000563221 ZNF608Q9ULD9 1512 aaPredicted RBP14.04□□□□□ -0.16
NAE1-210ENST00000563221 SYNJ1O43426 1573 aa14.04□□□□□ -0.16
NAE1-210ENST00000563221 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
NAE1-210ENST00000563221 SOGA1O94964 1423 aa14.01□□□□□ -0.17
NAE1-210ENST00000563221 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
NAE1-210ENST00000563221 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
NAE1-210ENST00000563221 TDRD9Q8NDG6 1382 aaKnown RBP13.97□□□□□ -0.17
NAE1-210ENST00000563221 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
NAE1-210ENST00000563221 MIER1Q8N108 512 aa13.96□□□□□ -0.17
NAE1-210ENST00000563221 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
NAE1-210ENST00000563221 BIVM-ERCC5R4GMW8 1640 aa13.95□□□□□ -0.18
NAE1-210ENST00000563221 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
NAE1-210ENST00000563221 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
NAE1-210ENST00000563221 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
NAE1-210ENST00000563221 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
NAE1-210ENST00000563221 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
NAE1-210ENST00000563221 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
NAE1-210ENST00000563221 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
NAE1-210ENST00000563221 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
NAE1-210ENST00000563221 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
NAE1-210ENST00000563221 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
NAE1-210ENST00000563221 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
NAE1-210ENST00000563221 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
NAE1-210ENST00000563221 GABBR2O75899 941 aa13.8□□□□□ -0.2
NAE1-210ENST00000563221 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
NAE1-210ENST00000563221 GRIN2BQ13224 1484 aa13.79□□□□□ -0.2
NAE1-210ENST00000563221 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
NAE1-210ENST00000563221 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
NAE1-210ENST00000563221 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
NAE1-210ENST00000563221 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
NAE1-210ENST00000563221 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
NAE1-210ENST00000563221 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
NAE1-210ENST00000563221 VASPP50552 380 aaPredicted RBP13.73□□□□□ -0.21
NAE1-210ENST00000563221 IGF1RP08069 1367 aa13.72□□□□□ -0.21
NAE1-210ENST00000563221 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
NAE1-210ENST00000563221 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
NAE1-210ENST00000563221 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
NAE1-210ENST00000563221 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
NAE1-210ENST00000563221 CHD1O14646 1710 aa13.7□□□□□ -0.22
NAE1-210ENST00000563221 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
NAE1-210ENST00000563221 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
NAE1-210ENST00000563221 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
NAE1-210ENST00000563221 ADAMTS12P58397 1594 aa13.67□□□□□ -0.22
NAE1-210ENST00000563221 ERICH3Q5RHP9 1530 aa13.67□□□□□ -0.22
NAE1-210ENST00000563221 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
NAE1-210ENST00000563221 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
NAE1-210ENST00000563221 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
NAE1-210ENST00000563221 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
NAE1-210ENST00000563221 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
NAE1-210ENST00000563221 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
NAE1-210ENST00000563221 NUBP1P53384 320 aa13.61□□□□□ -0.23
NAE1-210ENST00000563221 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
NAE1-210ENST00000563221 CEP170Q5SW79 1584 aa13.58□□□□□ -0.23
NAE1-210ENST00000563221 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
NAE1-210ENST00000563221 NUP160Q12769 1436 aa13.56□□□□□ -0.24
NAE1-210ENST00000563221 CLCN6P51797 869 aa13.56□□□□□ -0.24
NAE1-210ENST00000563221 CUL7Q14999 1698 aa13.53□□□□□ -0.24
NAE1-210ENST00000563221 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
NAE1-210ENST00000563221 MS4A3Q96HJ5 214 aa13.53□□□□□ -0.24
NAE1-210ENST00000563221 POTEIP0CG38 1075 aa13.52□□□□□ -0.25
NAE1-210ENST00000563221 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
NAE1-210ENST00000563221 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
NAE1-210ENST00000563221 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
NAE1-210ENST00000563221 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
NAE1-210ENST00000563221 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
NAE1-210ENST00000563221 ARHGEF11O15085 1522 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms