RNA–Protein interactions for RNA: ENST00000562958.6

CNN2-205, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-205ENST00000562958 SETD5Q9C0A6 1442 aa21.05■□□□□ 0.96
CNN2-205ENST00000562958 EFCAB5A4FU69 1503 aa21.03■□□□□ 0.96
CNN2-205ENST00000562958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.99■□□□□ 0.951e-6■□□□□ 11.1
CNN2-205ENST00000562958 TIMELESSQ9UNS1 1208 aa20.99■□□□□ 0.95
CNN2-205ENST00000562958 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
CNN2-205ENST00000562958 AQRO60306 1485 aaKnown RBP eCLIP20.99■□□□□ 0.951e-6■■■□□ 18.2
CNN2-205ENST00000562958 PCF11O94913 1555 aaKnown RBP20.98■□□□□ 0.95
CNN2-205ENST00000562958 FYCO1Q9BQS8 1478 aa20.98■□□□□ 0.95
CNN2-205ENST00000562958 CUL7Q14999 1698 aa20.97■□□□□ 0.95
CNN2-205ENST00000562958 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
CNN2-205ENST00000562958 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
CNN2-205ENST00000562958 PHLDB1Q86UU1 1377 aa20.93■□□□□ 0.94
CNN2-205ENST00000562958 CTTNBP2Q8WZ74 1663 aa20.91■□□□□ 0.94
CNN2-205ENST00000562958 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
CNN2-205ENST00000562958 CASKIN1Q8WXD9 1431 aa20.91■□□□□ 0.94
CNN2-205ENST00000562958 ITGAEP38570 1179 aa20.89■□□□□ 0.94
CNN2-205ENST00000562958 SUPT16HQ9Y5B9 1047 aaKnown RBP20.86■□□□□ 0.93
CNN2-205ENST00000562958 FMN1Q68DA7 1419 aa20.83■□□□□ 0.92
CNN2-205ENST00000562958 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
CNN2-205ENST00000562958 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
CNN2-205ENST00000562958 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
CNN2-205ENST00000562958 FAM50AQ14320 339 aaKnown RBP20.79■□□□□ 0.92
CNN2-205ENST00000562958 FHOD3Q2V2M9 1422 aa20.79■□□□□ 0.92
CNN2-205ENST00000562958 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
CNN2-205ENST00000562958 FGD6Q6ZV73 1430 aa20.74■□□□□ 0.91
CNN2-205ENST00000562958 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
CNN2-205ENST00000562958 SAMD9Q5K651 1589 aa20.73■□□□□ 0.91
CNN2-205ENST00000562958 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
CNN2-205ENST00000562958 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
CNN2-205ENST00000562958 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
CNN2-205ENST00000562958 HFM1A2PYH4 1435 aa20.69■□□□□ 0.9
CNN2-205ENST00000562958 CCER2I3L3R5 266 aa20.69■□□□□ 0.9
CNN2-205ENST00000562958 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
CNN2-205ENST00000562958 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
CNN2-205ENST00000562958 UACAQ9BZF9 1416 aa20.67■□□□□ 0.9
CNN2-205ENST00000562958 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
CNN2-205ENST00000562958 CCDC18Q5T9S5 1454 aa20.67■□□□□ 0.9
CNN2-205ENST00000562958 PTPN23Q9H3S7 1636 aa20.66■□□□□ 0.9
CNN2-205ENST00000562958 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
CNN2-205ENST00000562958 SUPT6HQ7KZ85 1726 aaKnown RBP20.65■□□□□ 0.9
CNN2-205ENST00000562958 EHBP1L1Q8N3D4 1523 aa20.65■□□□□ 0.9
CNN2-205ENST00000562958 MTUS2Q5JR59 1369 aa20.63■□□□□ 0.89
CNN2-205ENST00000562958 ATP1B4Q9UN42 357 aaPredicted RBP20.63■□□□□ 0.89
CNN2-205ENST00000562958 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
CNN2-205ENST00000562958 DDX10Q13206 875 aaKnown RBP20.62■□□□□ 0.89
CNN2-205ENST00000562958 MYOM3Q5VTT5 1437 aa20.61■□□□□ 0.89
CNN2-205ENST00000562958 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
CNN2-205ENST00000562958 LRRIQ1Q96JM4 1722 aa20.59■□□□□ 0.89
CNN2-205ENST00000562958 NCOA2Q15596 1464 aa20.58■□□□□ 0.89
CNN2-205ENST00000562958 ANP32CO43423 234 aa20.58■□□□□ 0.88
CNN2-205ENST00000562958 URB2Q14146 1524 aaKnown RBP20.57■□□□□ 0.88
CNN2-205ENST00000562958 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
CNN2-205ENST00000562958 NAIPQ13075 1403 aa20.55■□□□□ 0.88
CNN2-205ENST00000562958 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
CNN2-205ENST00000562958 KCNH8Q96L42 1107 aa20.55■□□□□ 0.88
CNN2-205ENST00000562958 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
CNN2-205ENST00000562958 TSHZ2Q9NRE2 1034 aa20.54■□□□□ 0.88
CNN2-205ENST00000562958 NESP48681 1621 aa20.54■□□□□ 0.88
CNN2-205ENST00000562958 GCC2Q8IWJ2 1684 aa20.53■□□□□ 0.88
CNN2-205ENST00000562958 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
CNN2-205ENST00000562958 TCOF1Q13428 1488 aaKnown RBP20.52■□□□□ 0.88
CNN2-205ENST00000562958 PTPRKQ15262 1439 aa20.51■□□□□ 0.87
CNN2-205ENST00000562958 HECW1Q76N89 1606 aa20.5■□□□□ 0.87
CNN2-205ENST00000562958 NEFLP07196 543 aa20.49■□□□□ 0.87
CNN2-205ENST00000562958 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
CNN2-205ENST00000562958 KDM5BQ9UGL1 1544 aa20.45■□□□□ 0.86
CNN2-205ENST00000562958 FKBP8Q14318 412 aa20.42■□□□□ 0.86
CNN2-205ENST00000562958 MIA2Q96PC5 1412 aa20.42■□□□□ 0.86
CNN2-205ENST00000562958 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
CNN2-205ENST00000562958 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
CNN2-205ENST00000562958 PBRM1Q86U86 1689 aa20.39■□□□□ 0.85
CNN2-205ENST00000562958 MAGI3Q5TCQ9 1506 aa20.38■□□□□ 0.85
CNN2-205ENST00000562958 IQGAP2Q13576 1575 aa20.38■□□□□ 0.85
CNN2-205ENST00000562958 EPRSP07814 1512 aaKnown RBP20.34■□□□□ 0.85
CNN2-205ENST00000562958 HIRIP3Q9BW71 556 aaPredicted RBP20.33■□□□□ 0.85
CNN2-205ENST00000562958 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
CNN2-205ENST00000562958 WDR62O43379 1518 aa20.31■□□□□ 0.84
CNN2-205ENST00000562958 ANP32EQ9BTT0 268 aa20.31■□□□□ 0.84
CNN2-205ENST00000562958 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
CNN2-205ENST00000562958 DENND4BO75064 1496 aaPredicted RBP20.28■□□□□ 0.84
CNN2-205ENST00000562958 ROCK1Q13464 1354 aa20.28■□□□□ 0.84
CNN2-205ENST00000562958 BCANQ96GW7 911 aa20.28■□□□□ 0.84
CNN2-205ENST00000562958 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
CNN2-205ENST00000562958 CNTLNQ9NXG0 1405 aa20.25■□□□□ 0.83
CNN2-205ENST00000562958 EIF4G2P78344 907 aaKnown RBP eCLIP20.25■□□□□ 0.836e-8■■■□□ 18.5
CNN2-205ENST00000562958 ERICH6BQ5W0A0 696 aa20.24■□□□□ 0.83
CNN2-205ENST00000562958 POLR1AO95602 1720 aaPredicted RBP20.23■□□□□ 0.83
CNN2-205ENST00000562958 DNMT1P26358 1616 aaKnown RBP20.23■□□□□ 0.83
CNN2-205ENST00000562958 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
CNN2-205ENST00000562958 KDM6BO15054 1643 aa20.22■□□□□ 0.83
CNN2-205ENST00000562958 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
CNN2-205ENST00000562958 WASHC2AQ641Q2 1341 aa20.21■□□□□ 0.83
CNN2-205ENST00000562958 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
CNN2-205ENST00000562958 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
CNN2-205ENST00000562958 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
CNN2-205ENST00000562958 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
CNN2-205ENST00000562958 DAPK1P53355 1430 aa20.18■□□□□ 0.82
CNN2-205ENST00000562958 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.825e-9■■□□□ 11.7
CNN2-205ENST00000562958 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
CNN2-205ENST00000562958 KIAA0556O60303 1618 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms