RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
CNOT1-203ENST00000562046 CHRM1P11229 460 aaPredicted RBP11.33□□□□□ -0.6
CNOT1-203ENST00000562046 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
CNOT1-203ENST00000562046 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-203ENST00000562046 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
CNOT1-203ENST00000562046 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
CNOT1-203ENST00000562046 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
CNOT1-203ENST00000562046 PYGBP11216 843 aa11.23□□□□□ -0.61
CNOT1-203ENST00000562046 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
CNOT1-203ENST00000562046 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
CNOT1-203ENST00000562046 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
CNOT1-203ENST00000562046 DNAJC5Q9H3Z4 198 aa11.2□□□□□ -0.62
CNOT1-203ENST00000562046 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
CNOT1-203ENST00000562046 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
CNOT1-203ENST00000562046 VGFO15240 615 aaPredicted RBP11.17□□□□□ -0.62
CNOT1-203ENST00000562046 TAOK2Q9UL54 1235 aa11.16□□□□□ -0.62
CNOT1-203ENST00000562046 HAP1P54257 671 aaPredicted RBP11.15□□□□□ -0.62
CNOT1-203ENST00000562046 PAXIP1Q6ZW49 1069 aaPredicted RBP11.15□□□□□ -0.62
CNOT1-203ENST00000562046 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
CNOT1-203ENST00000562046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-203ENST00000562046 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-203ENST00000562046 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-203ENST00000562046 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
CNOT1-203ENST00000562046 STK25O00506 426 aa11.09□□□□□ -0.63
CNOT1-203ENST00000562046 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
CNOT1-203ENST00000562046 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
CNOT1-203ENST00000562046 BCL11BQ9C0K0 894 aaPredicted RBP11.06□□□□□ -0.64
CNOT1-203ENST00000562046 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
CNOT1-203ENST00000562046 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
CNOT1-203ENST00000562046 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
CNOT1-203ENST00000562046 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
CNOT1-203ENST00000562046 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
CNOT1-203ENST00000562046 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
CNOT1-203ENST00000562046 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
CNOT1-203ENST00000562046 MAP3K13O43283 966 aa11.02□□□□□ -0.65
CNOT1-203ENST00000562046 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
CNOT1-203ENST00000562046 PDAP1Q13442 181 aaKnown RBP11.01□□□□□ -0.65
CNOT1-203ENST00000562046 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
CNOT1-203ENST00000562046 ZRANB1Q9UGI0 708 aa11.01□□□□□ -0.65
CNOT1-203ENST00000562046 IFNL1Q8IU54 200 aa11□□□□□ -0.65
CNOT1-203ENST00000562046 KDM2AQ9Y2K7 1162 aa11□□□□□ -0.65
CNOT1-203ENST00000562046 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
CNOT1-203ENST00000562046 PSEN1P49768 467 aa10.97□□□□□ -0.65
CNOT1-203ENST00000562046 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
CNOT1-203ENST00000562046 RYDENQ9NUL5 291 aaKnown RBP10.88□□□□□ -0.67
CNOT1-203ENST00000562046 MS4A3Q96HJ5 214 aa10.85□□□□□ -0.67
CNOT1-203ENST00000562046 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
CNOT1-203ENST00000562046 TRPC6Q9Y210 931 aa10.84□□□□□ -0.67
CNOT1-203ENST00000562046 EVX2Q03828 476 aa10.82□□□□□ -0.68
CNOT1-203ENST00000562046 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
CNOT1-203ENST00000562046 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
CNOT1-203ENST00000562046 FBXO22Q8NEZ5 403 aa10.8□□□□□ -0.68
CNOT1-203ENST00000562046 HAX1O00165 279 aa10.78□□□□□ -0.68
CNOT1-203ENST00000562046 SOX12O15370 315 aa10.78□□□□□ -0.68
CNOT1-203ENST00000562046 TMEM106CQ9BVX2 250 aa10.77□□□□□ -0.69
CNOT1-203ENST00000562046 PHF8Q9UPP1 1060 aa10.76□□□□□ -0.69
CNOT1-203ENST00000562046 GALR2O43603 387 aaPredicted RBP10.74□□□□□ -0.69
CNOT1-203ENST00000562046 TIE1P35590 1138 aa10.74□□□□□ -0.69
CNOT1-203ENST00000562046 NLRP6P59044 892 aa10.74□□□□□ -0.69
CNOT1-203ENST00000562046 BCANQ96GW7 911 aa10.74□□□□□ -0.69
CNOT1-203ENST00000562046 PPP1R37O75864 691 aa10.73□□□□□ -0.69
CNOT1-203ENST00000562046 TTLL13PA6NNM8 815 aa10.71□□□□□ -0.69
CNOT1-203ENST00000562046 CLCN6P51797 869 aa10.71□□□□□ -0.69
CNOT1-203ENST00000562046 CADPS2Q86UW7 1296 aa10.71□□□□□ -0.69
CNOT1-203ENST00000562046 MS4A4AQ96JQ5 239 aa10.7□□□□□ -0.7
CNOT1-203ENST00000562046 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
CNOT1-203ENST00000562046 ILDR1Q86SU0 546 aaPredicted RBP10.67□□□□□ -0.7
CNOT1-203ENST00000562046 GOLGA2Q08379 1002 aa10.65□□□□□ -0.7
CNOT1-203ENST00000562046 MKRN3Q13064 507 aaKnown RBP10.64□□□□□ -0.71
CNOT1-203ENST00000562046 POTEHQ6S545 545 aa10.62□□□□□ -0.71
CNOT1-203ENST00000562046 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
CNOT1-203ENST00000562046 ATMINO43313 823 aaPredicted RBP10.59□□□□□ -0.71
CNOT1-203ENST00000562046 ATN1P54259 1190 aaPredicted RBP10.59□□□□□ -0.71
CNOT1-203ENST00000562046 ASTLQ6HA08 431 aaPredicted RBP10.59□□□□□ -0.71
CNOT1-203ENST00000562046 GABBR2O75899 941 aa10.58□□□□□ -0.72
CNOT1-203ENST00000562046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.57□□□□□ -0.722e-12■□□□□ 9.4
CNOT1-203ENST00000562046 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
CNOT1-203ENST00000562046 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
CNOT1-203ENST00000562046 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
CNOT1-203ENST00000562046 WDR70Q9NW82 654 aa10.52□□□□□ -0.73
CNOT1-203ENST00000562046 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
CNOT1-203ENST00000562046 CRISPLD2Q9H0B8 497 aa10.51□□□□□ -0.73
CNOT1-203ENST00000562046 NBR1Q14596 966 aa10.5□□□□□ -0.73
CNOT1-203ENST00000562046 IER5LQ5T953 404 aa10.5□□□□□ -0.73
CNOT1-203ENST00000562046 KCNV2Q8TDN2 545 aa10.5□□□□□ -0.73
CNOT1-203ENST00000562046 P3H3Q8IVL6 736 aa10.49□□□□□ -0.73
CNOT1-203ENST00000562046 MFSD10Q14728 455 aa10.48□□□□□ -0.73
CNOT1-203ENST00000562046 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
CNOT1-203ENST00000562046 PDE4AP27815 886 aa10.47□□□□□ -0.73
CNOT1-203ENST00000562046 OCEL1Q9H607 264 aa10.46□□□□□ -0.73
CNOT1-203ENST00000562046 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
CNOT1-203ENST00000562046 PRKCSHP14314 528 aaPredicted RBP10.44□□□□□ -0.74
CNOT1-203ENST00000562046 E2F4Q16254 413 aa10.43□□□□□ -0.74
CNOT1-203ENST00000562046 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
CNOT1-203ENST00000562046 DCBLD2Q96PD2 775 aa10.43□□□□□ -0.74
CNOT1-203ENST00000562046 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
CNOT1-203ENST00000562046 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
CNOT1-203ENST00000562046 ARHGEF1Q92888 912 aaKnown RBP10.4□□□□□ -0.74
CNOT1-203ENST00000562046 DDX27Q96GQ7 796 aaKnown RBP10.4□□□□□ -0.74
CNOT1-203ENST00000562046 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms