RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 KLHL34Q8N239 644 aa10.11□□□□□ -0.79
USP8-211ENST00000560527 SPOCK2Q92563 424 aa10.1□□□□□ -0.79
USP8-211ENST00000560527 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
USP8-211ENST00000560527 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
USP8-211ENST00000560527 OTUD5Q96G74 571 aa10.01□□□□□ -0.81
USP8-211ENST00000560527 PHF12Q96QT6 1004 aa10□□□□□ -0.81
USP8-211ENST00000560527 PKD2Q13563 968 aa9.99□□□□□ -0.81
USP8-211ENST00000560527 POTEMA6NI47 508 aa9.94□□□□□ -0.82
USP8-211ENST00000560527 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
USP8-211ENST00000560527 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
USP8-211ENST00000560527 C7P10643 843 aa9.91□□□□□ -0.82
USP8-211ENST00000560527 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
USP8-211ENST00000560527 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
USP8-211ENST00000560527 POTEGQ6S5H5 508 aa9.9□□□□□ -0.82
USP8-211ENST00000560527 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
USP8-211ENST00000560527 PCDH10Q9P2E7 1040 aa9.89□□□□□ -0.83
USP8-211ENST00000560527 METRNQ9UJH8 293 aa9.89□□□□□ -0.83
USP8-211ENST00000560527 ECM2O94769 699 aaPredicted RBP9.88□□□□□ -0.83
USP8-211ENST00000560527 NUBP1P53384 320 aa9.88□□□□□ -0.83
USP8-211ENST00000560527 ASTLQ6HA08 431 aaPredicted RBP9.88□□□□□ -0.83
USP8-211ENST00000560527 PELP1Q8IZL8 1130 aaKnown RBP9.88□□□□□ -0.83
USP8-211ENST00000560527 GSE1Q14687 1217 aa9.87□□□□□ -0.83
USP8-211ENST00000560527 MS4A3Q96HJ5 214 aa9.85□□□□□ -0.83
USP8-211ENST00000560527 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
USP8-211ENST00000560527 ATMINO43313 823 aaPredicted RBP9.84□□□□□ -0.83
USP8-211ENST00000560527 SCUBE2Q9NQ36 999 aa9.82□□□□□ -0.84
USP8-211ENST00000560527 FAM212AQ96EL1 285 aa9.81□□□□□ -0.84
USP8-211ENST00000560527 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
USP8-211ENST00000560527 SLC24A1O60721 1099 aa9.79□□□□□ -0.84
USP8-211ENST00000560527 DCAF8Q5TAQ9 597 aa9.78□□□□□ -0.84
USP8-211ENST00000560527 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
USP8-211ENST00000560527 RGL2O15211 777 aa9.76□□□□□ -0.85
USP8-211ENST00000560527 RASEFQ8IZ41 740 aa9.76□□□□□ -0.85
USP8-211ENST00000560527 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
USP8-211ENST00000560527 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
USP8-211ENST00000560527 ATN1P54259 1190 aaPredicted RBP9.73□□□□□ -0.85
USP8-211ENST00000560527 POTEJP0CG39 1038 aa9.72□□□□□ -0.85
USP8-211ENST00000560527 CCDC61Q9Y6R9 512 aa9.72□□□□□ -0.85
USP8-211ENST00000560527 KIF12Q96FN5 646 aa9.71□□□□□ -0.86
USP8-211ENST00000560527 SEC24BO95487 1268 aa9.68□□□□□ -0.86
USP8-211ENST00000560527 TAOK2Q9UL54 1235 aa9.68□□□□□ -0.86
USP8-211ENST00000560527 TIE1P35590 1138 aa9.67□□□□□ -0.86
USP8-211ENST00000560527 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
USP8-211ENST00000560527 BBXQ8WY36 941 aaPredicted RBP9.66□□□□□ -0.86
USP8-211ENST00000560527 RNF25Q96BH1 459 aaPredicted RBP9.66□□□□□ -0.86
USP8-211ENST00000560527 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
USP8-211ENST00000560527 RIOK3O14730 519 aaKnown RBP9.65□□□□□ -0.86
USP8-211ENST00000560527 MAP3K13O43283 966 aa9.63□□□□□ -0.87
USP8-211ENST00000560527 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
USP8-211ENST00000560527 HS6ST3Q8IZP7 471 aa9.61□□□□□ -0.87
USP8-211ENST00000560527 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
USP8-211ENST00000560527 PYGBP11216 843 aa9.6□□□□□ -0.87
USP8-211ENST00000560527 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
USP8-211ENST00000560527 VGFO15240 615 aaPredicted RBP9.59□□□□□ -0.87
USP8-211ENST00000560527 LCE2DQ5TA82 110 aaPredicted RBP9.59□□□□□ -0.87
USP8-211ENST00000560527 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
USP8-211ENST00000560527 POTEFA5A3E0 1075 aa9.57□□□□□ -0.88
USP8-211ENST00000560527 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
USP8-211ENST00000560527 IER5LQ5T953 404 aa9.57□□□□□ -0.88
USP8-211ENST00000560527 TRPC6Q9Y210 931 aa9.57□□□□□ -0.88
USP8-211ENST00000560527 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
USP8-211ENST00000560527 COLQQ9Y215 455 aaPredicted RBP9.54□□□□□ -0.88
USP8-211ENST00000560527 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
USP8-211ENST00000560527 CDAN1Q8IWY9 1227 aa9.53□□□□□ -0.88
USP8-211ENST00000560527 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
USP8-211ENST00000560527 SPRYD3Q8NCJ5 442 aa9.5□□□□□ -0.89
USP8-211ENST00000560527 SLAIN1Q8ND83 568 aa9.5□□□□□ -0.89
USP8-211ENST00000560527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.49□□□□□ -0.89
USP8-211ENST00000560527 STK25O00506 426 aa9.49□□□□□ -0.89
USP8-211ENST00000560527 ZFP91Q96JP5 570 aaPredicted RBP9.49□□□□□ -0.89
USP8-211ENST00000560527 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
USP8-211ENST00000560527 PLCG2P16885 1265 aa9.47□□□□□ -0.89
USP8-211ENST00000560527 PDAP1Q13442 181 aaKnown RBP9.47□□□□□ -0.89
USP8-211ENST00000560527 HAP1P54257 671 aaPredicted RBP9.46□□□□□ -0.9
USP8-211ENST00000560527 BCL11BQ9C0K0 894 aaPredicted RBP9.46□□□□□ -0.9
USP8-211ENST00000560527 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
USP8-211ENST00000560527 TMEM106CQ9BVX2 250 aa9.44□□□□□ -0.9
USP8-211ENST00000560527 PCDHB8Q9UN66 801 aa9.44□□□□□ -0.9
USP8-211ENST00000560527 STK24Q9Y6E0 443 aa9.44□□□□□ -0.9
USP8-211ENST00000560527 ST18O60284 1047 aa9.43□□□□□ -0.9
USP8-211ENST00000560527 SNPHO15079 494 aa9.42□□□□□ -0.9
USP8-211ENST00000560527 NKX1-1Q15270 411 aaPredicted RBP9.42□□□□□ -0.9
USP8-211ENST00000560527 IFNL1Q8IU54 200 aa9.42□□□□□ -0.9
USP8-211ENST00000560527 RYDENQ9NUL5 291 aaKnown RBP9.42□□□□□ -0.9
USP8-211ENST00000560527 VSIG10Q8N0Z9 540 aa9.41□□□□□ -0.9
USP8-211ENST00000560527 PSEN1P49768 467 aa9.4□□□□□ -0.9
USP8-211ENST00000560527 GTPBP6O43824 516 aaPredicted RBP9.38□□□□□ -0.91
USP8-211ENST00000560527 TMEM121BQ9BXQ6 578 aaPredicted RBP9.38□□□□□ -0.91
USP8-211ENST00000560527 OCEL1Q9H607 264 aa9.37□□□□□ -0.91
USP8-211ENST00000560527 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.36□□□□□ -0.91
USP8-211ENST00000560527 IRX5P78411 483 aaPredicted RBP9.34□□□□□ -0.91
USP8-211ENST00000560527 TSHZ2Q9NRE2 1034 aa9.31□□□□□ -0.92
USP8-211ENST00000560527 MMRN1Q13201 1228 aa9.29□□□□□ -0.92
USP8-211ENST00000560527 SOX12O15370 315 aa9.28□□□□□ -0.92
USP8-211ENST00000560527 SPNS2Q8IVW8 549 aa9.28□□□□□ -0.92
USP8-211ENST00000560527 GOLGA2Q08379 1002 aa9.27□□□□□ -0.93
USP8-211ENST00000560527 CABP2Q9NPB3 220 aa9.27□□□□□ -0.93
USP8-211ENST00000560527 KDM2AQ9Y2K7 1162 aa9.27□□□□□ -0.93
USP8-211ENST00000560527 MFRPQ9BY79 579 aa9.26□□□□□ -0.93
USP8-211ENST00000560527 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms