RNA–Protein interactions for RNA: ENST00000557860.1

ACTC1-202, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 3

Gene ACTC1, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-202ENST00000557860 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
ACTC1-202ENST00000557860 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
ACTC1-202ENST00000557860 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
ACTC1-202ENST00000557860 EIF4G3O43432 1585 aaKnown RBP10.32□□□□□ -0.76
ACTC1-202ENST00000557860 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.76
ACTC1-202ENST00000557860 TARBP1Q13395 1621 aaKnown RBP10.3□□□□□ -0.76
ACTC1-202ENST00000557860 ARHGEF11O15085 1522 aa10.28□□□□□ -0.76
ACTC1-202ENST00000557860 CHD1O14646 1710 aa10.28□□□□□ -0.76
ACTC1-202ENST00000557860 FBLN2P98095 1184 aa10.28□□□□□ -0.76
ACTC1-202ENST00000557860 POLA1P09884 1462 aaPredicted RBP10.28□□□□□ -0.76
ACTC1-202ENST00000557860 RAD54L2Q9Y4B4 1467 aa10.27□□□□□ -0.77
ACTC1-202ENST00000557860 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
ACTC1-202ENST00000557860 ABCB7O75027 752 aa10.25□□□□□ -0.77
ACTC1-202ENST00000557860 CYB5RLQ6IPT4 315 aa10.25□□□□□ -0.77
ACTC1-202ENST00000557860 TDRD9Q8NDG6 1382 aaKnown RBP10.25□□□□□ -0.77
ACTC1-202ENST00000557860 SOGA1O94964 1423 aa10.24□□□□□ -0.77
ACTC1-202ENST00000557860 DSG3P32926 999 aa10.22□□□□□ -0.77
ACTC1-202ENST00000557860 FGD5Q6ZNL6 1462 aa10.22□□□□□ -0.77
ACTC1-202ENST00000557860 CUX1P39880 1505 aa10.2□□□□□ -0.78
ACTC1-202ENST00000557860 SUPT5HO00267 1087 aaKnown RBP10.19□□□□□ -0.78
ACTC1-202ENST00000557860 SNAPC4Q5SXM2 1469 aa10.17□□□□□ -0.78
ACTC1-202ENST00000557860 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
ACTC1-202ENST00000557860 CHMP7Q8WUX9 453 aaPredicted RBP10.17□□□□□ -0.78
ACTC1-202ENST00000557860 ZBTB12Q9Y330 459 aaPredicted RBP10.17□□□□□ -0.78
ACTC1-202ENST00000557860 WDR97A6NE52 1622 aa10.15□□□□□ -0.79
ACTC1-202ENST00000557860 GRIN2BQ13224 1484 aa10.14□□□□□ -0.79
ACTC1-202ENST00000557860 MAGI1Q96QZ7 1491 aaPredicted RBP10.13□□□□□ -0.79
ACTC1-202ENST00000557860 CLASP1Q7Z460 1538 aa10.12□□□□□ -0.79
ACTC1-202ENST00000557860 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
ACTC1-202ENST00000557860 SPDYE4A6NLX3 237 aa10.12□□□□□ -0.79
ACTC1-202ENST00000557860 SYNJ1O43426 1573 aa10.12□□□□□ -0.79
ACTC1-202ENST00000557860 GAPVD1Q14C86 1478 aa10.11□□□□□ -0.79
ACTC1-202ENST00000557860 SYNJ2O15056 1496 aa10.1□□□□□ -0.79
ACTC1-202ENST00000557860 ABCA10Q8WWZ4 1543 aa10.08□□□□□ -0.8
ACTC1-202ENST00000557860 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
ACTC1-202ENST00000557860 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
ACTC1-202ENST00000557860 PROM2Q8N271 834 aa10.02□□□□□ -0.81
ACTC1-202ENST00000557860 TOP2BQ02880 1626 aa10.02□□□□□ -0.81
ACTC1-202ENST00000557860 BIVM-ERCC5R4GMW8 1640 aa10.02□□□□□ -0.81
ACTC1-202ENST00000557860 GRIN2AQ12879 1464 aa10.02□□□□□ -0.81
ACTC1-202ENST00000557860 ERCC6L2Q5T890 1561 aa10□□□□□ -0.81
ACTC1-202ENST00000557860 ADAMTS12P58397 1594 aa9.99□□□□□ -0.81
ACTC1-202ENST00000557860 CEP170Q5SW79 1584 aa9.99□□□□□ -0.81
ACTC1-202ENST00000557860 FHAD1B1AJZ9 1412 aa9.97□□□□□ -0.81
ACTC1-202ENST00000557860 NUP160Q12769 1436 aa9.97□□□□□ -0.81
ACTC1-202ENST00000557860 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
ACTC1-202ENST00000557860 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
ACTC1-202ENST00000557860 SPDYE2BA6NHP3 402 aa9.93□□□□□ -0.82
ACTC1-202ENST00000557860 SPDYE6P0CI01 402 aa9.93□□□□□ -0.82
ACTC1-202ENST00000557860 SPDYE2Q495Y8 402 aa9.93□□□□□ -0.82
ACTC1-202ENST00000557860 FBXO3Q9UK99 471 aa9.92□□□□□ -0.82
ACTC1-202ENST00000557860 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
ACTC1-202ENST00000557860 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
ACTC1-202ENST00000557860 PRG4Q92954 1404 aaPredicted RBP9.9□□□□□ -0.82
ACTC1-202ENST00000557860 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
ACTC1-202ENST00000557860 KIF13AQ9H1H9 1805 aa9.86□□□□□ -0.83
ACTC1-202ENST00000557860 RUSC2Q8N2Y8 1516 aa9.86□□□□□ -0.83
ACTC1-202ENST00000557860 AMER1Q5JTC6 1135 aaPredicted RBP9.84□□□□□ -0.83
ACTC1-202ENST00000557860 IGF1RP08069 1367 aa9.84□□□□□ -0.83
ACTC1-202ENST00000557860 KIF27Q86VH2 1401 aa9.82□□□□□ -0.84
ACTC1-202ENST00000557860 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
ACTC1-202ENST00000557860 RTN4Q9NQC3 1192 aaKnown RBP9.82□□□□□ -0.84
ACTC1-202ENST00000557860 FAM69CQ0P6D2 419 aa9.81□□□□□ -0.84
ACTC1-202ENST00000557860 KIAA0586Q9BVV6 1533 aa9.81□□□□□ -0.84
ACTC1-202ENST00000557860 CUL7Q14999 1698 aa9.8□□□□□ -0.84
ACTC1-202ENST00000557860 ADCY10Q96PN6 1610 aa9.79□□□□□ -0.84
ACTC1-202ENST00000557860 TTBK1Q5TCY1 1321 aaPredicted RBP9.79□□□□□ -0.84
ACTC1-202ENST00000557860 CARMIL1Q5VZK9 1371 aa9.78□□□□□ -0.84
ACTC1-202ENST00000557860 VASPP50552 380 aaPredicted RBP9.78□□□□□ -0.84
ACTC1-202ENST00000557860 ABCC10Q5T3U5 1492 aa9.78□□□□□ -0.84
ACTC1-202ENST00000557860 MAPKBP1O60336 1514 aa9.77□□□□□ -0.85
ACTC1-202ENST00000557860 TSPOAP1O95153 1857 aa9.76□□□□□ -0.85
ACTC1-202ENST00000557860 DIP2BQ9P265 1576 aa9.75□□□□□ -0.85
ACTC1-202ENST00000557860 PTPRGP23470 1445 aa9.74□□□□□ -0.85
ACTC1-202ENST00000557860 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
ACTC1-202ENST00000557860 CARMIL2Q6F5E8 1435 aa9.72□□□□□ -0.85
ACTC1-202ENST00000557860 IQGAP2Q13576 1575 aa9.71□□□□□ -0.85
ACTC1-202ENST00000557860 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
ACTC1-202ENST00000557860 TNIKQ9UKE5 1360 aa9.71□□□□□ -0.86
ACTC1-202ENST00000557860 KDM6BO15054 1643 aa9.69□□□□□ -0.86
ACTC1-202ENST00000557860 ABCC2Q92887 1545 aa9.68□□□□□ -0.86
ACTC1-202ENST00000557860 DISP1Q96F81 1524 aa9.67□□□□□ -0.86
ACTC1-202ENST00000557860 RAPGEF2Q9Y4G8 1499 aa9.67□□□□□ -0.86
ACTC1-202ENST00000557860 IFNLR1Q8IU57 520 aaPredicted RBP9.67□□□□□ -0.86
ACTC1-202ENST00000557860 ASXL2Q76L83 1435 aa9.66□□□□□ -0.86
ACTC1-202ENST00000557860 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
ACTC1-202ENST00000557860 UACAQ9BZF9 1416 aa9.65□□□□□ -0.86
ACTC1-202ENST00000557860 PLB1Q6P1J6 1458 aa9.65□□□□□ -0.87
ACTC1-202ENST00000557860 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
ACTC1-202ENST00000557860 UHRF1BP1LA0JNW5 1464 aa9.64□□□□□ -0.87
ACTC1-202ENST00000557860 UGGT2Q9NYU1 1516 aa9.63□□□□□ -0.87
ACTC1-202ENST00000557860 PPRC1Q5VV67 1664 aaKnown RBP9.63□□□□□ -0.87
ACTC1-202ENST00000557860 KIAA0556O60303 1618 aa9.62□□□□□ -0.87
ACTC1-202ENST00000557860 GLI2P10070 1586 aa9.62□□□□□ -0.87
ACTC1-202ENST00000557860 KDM5BQ9UGL1 1544 aa9.61□□□□□ -0.87
ACTC1-202ENST00000557860 CTTNBP2Q8WZ74 1663 aa9.61□□□□□ -0.87
ACTC1-202ENST00000557860 ZCCHC11Q5TAX3 1644 aaKnown RBP9.61□□□□□ -0.87
ACTC1-202ENST00000557860 EPRSP07814 1512 aaKnown RBP9.6□□□□□ -0.87
ACTC1-202ENST00000557860 MAP3K4Q9Y6R4 1608 aa9.59□□□□□ -0.87
ACTC1-202ENST00000557860 COL17A1Q9UMD9 1497 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms