RNA–Protein interactions for RNA: ENST00000557860.1

ACTC1-202, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 3

Gene ACTC1, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-202ENST00000557860 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
ACTC1-202ENST00000557860 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
ACTC1-202ENST00000557860 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
ACTC1-202ENST00000557860 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
ACTC1-202ENST00000557860 NISCHQ9Y2I1 1504 aa14.08□□□□□ -0.16
ACTC1-202ENST00000557860 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
ACTC1-202ENST00000557860 FOXD1Q16676 465 aa13.61□□□□□ -0.23
ACTC1-202ENST00000557860 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
ACTC1-202ENST00000557860 ADRA2BP18089 450 aa13.22□□□□□ -0.29
ACTC1-202ENST00000557860 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
ACTC1-202ENST00000557860 ABCC9O60706 1549 aa12.72□□□□□ -0.37
ACTC1-202ENST00000557860 MSH5O43196 834 aa12.63□□□□□ -0.39
ACTC1-202ENST00000557860 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
ACTC1-202ENST00000557860 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
ACTC1-202ENST00000557860 KCNA4P22459 653 aa12.33□□□□□ -0.44
ACTC1-202ENST00000557860 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
ACTC1-202ENST00000557860 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
ACTC1-202ENST00000557860 RB1CC1Q8TDY2 1594 aa12.05□□□□□ -0.48
ACTC1-202ENST00000557860 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
ACTC1-202ENST00000557860 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
ACTC1-202ENST00000557860 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
ACTC1-202ENST00000557860 NACADO15069 1562 aa11.96□□□□□ -0.5
ACTC1-202ENST00000557860 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
ACTC1-202ENST00000557860 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
ACTC1-202ENST00000557860 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
ACTC1-202ENST00000557860 PABPN1Q86U42 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
ACTC1-202ENST00000557860 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
ACTC1-202ENST00000557860 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
ACTC1-202ENST00000557860 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
ACTC1-202ENST00000557860 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
ACTC1-202ENST00000557860 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.53
ACTC1-202ENST00000557860 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
ACTC1-202ENST00000557860 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
ACTC1-202ENST00000557860 ZCCHC6Q5VYS8 1495 aaKnown RBP11.64□□□□□ -0.55
ACTC1-202ENST00000557860 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
ACTC1-202ENST00000557860 DCAF1Q9Y4B6 1507 aa11.59□□□□□ -0.55
ACTC1-202ENST00000557860 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
ACTC1-202ENST00000557860 CSRNP3Q8WYN3 585 aa11.49□□□□□ -0.57
ACTC1-202ENST00000557860 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
ACTC1-202ENST00000557860 CC2D2AQ9P2K1 1620 aa11.48□□□□□ -0.57
ACTC1-202ENST00000557860 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
ACTC1-202ENST00000557860 EIF4G1Q04637 1599 aaKnown RBP11.42□□□□□ -0.58
ACTC1-202ENST00000557860 ZBTB22O15209 634 aa11.36□□□□□ -0.59
ACTC1-202ENST00000557860 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
ACTC1-202ENST00000557860 SLC4A2P04920 1241 aa11.22□□□□□ -0.61
ACTC1-202ENST00000557860 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
ACTC1-202ENST00000557860 NCAPD3P42695 1498 aa11.04□□□□□ -0.64
ACTC1-202ENST00000557860 ATAD2BQ9ULI0 1458 aa11.01□□□□□ -0.65
ACTC1-202ENST00000557860 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
ACTC1-202ENST00000557860 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
ACTC1-202ENST00000557860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
ACTC1-202ENST00000557860 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
ACTC1-202ENST00000557860 ERCC6Q03468 1493 aa10.97□□□□□ -0.65
ACTC1-202ENST00000557860 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
ACTC1-202ENST00000557860 HMGXB3Q12766 1538 aa10.94□□□□□ -0.66
ACTC1-202ENST00000557860 CUX2O14529 1486 aa10.93□□□□□ -0.66
ACTC1-202ENST00000557860 NESP48681 1621 aa10.92□□□□□ -0.66
ACTC1-202ENST00000557860 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
ACTC1-202ENST00000557860 BAZ1BQ9UIG0 1483 aaKnown RBP10.9□□□□□ -0.66
ACTC1-202ENST00000557860 ATXN8OSP0DMR3 200 aa10.88□□□□□ -0.67
ACTC1-202ENST00000557860 U3KPZ7 1027 aaPredicted RBP10.88□□□□□ -0.67
ACTC1-202ENST00000557860 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
ACTC1-202ENST00000557860 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
ACTC1-202ENST00000557860 RNF39Q9H2S5 420 aa10.81□□□□□ -0.68
ACTC1-202ENST00000557860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.8□□□□□ -0.68
ACTC1-202ENST00000557860 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
ACTC1-202ENST00000557860 LAMC3Q9Y6N6 1575 aa10.8□□□□□ -0.68
ACTC1-202ENST00000557860 THOC2Q8NI27 1593 aaKnown RBP10.78□□□□□ -0.68
ACTC1-202ENST00000557860 SAMD1Q6SPF0 538 aaPredicted RBP10.78□□□□□ -0.68
ACTC1-202ENST00000557860 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
ACTC1-202ENST00000557860 WIZO95785 1651 aa10.75□□□□□ -0.69
ACTC1-202ENST00000557860 PDS5BQ9NTI5 1447 aa10.74□□□□□ -0.69
ACTC1-202ENST00000557860 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.69
ACTC1-202ENST00000557860 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
ACTC1-202ENST00000557860 C1QBPQ07021 282 aaKnown RBP10.67□□□□□ -0.7
ACTC1-202ENST00000557860 CACNB1Q02641 598 aaPredicted RBP10.66□□□□□ -0.7
ACTC1-202ENST00000557860 MRC2Q9UBG0 1479 aa10.64□□□□□ -0.71
ACTC1-202ENST00000557860 APLP2Q06481 763 aa10.64□□□□□ -0.71
ACTC1-202ENST00000557860 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
ACTC1-202ENST00000557860 WDR62O43379 1518 aa10.61□□□□□ -0.71
ACTC1-202ENST00000557860 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
ACTC1-202ENST00000557860 FANCD2Q9BXW9 1451 aa10.6□□□□□ -0.71
ACTC1-202ENST00000557860 CFTRP13569 1480 aa10.57□□□□□ -0.72
ACTC1-202ENST00000557860 TOP2AP11388 1531 aaKnown RBP10.57□□□□□ -0.72
ACTC1-202ENST00000557860 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
ACTC1-202ENST00000557860 URB2Q14146 1524 aaKnown RBP10.52□□□□□ -0.73
ACTC1-202ENST00000557860 ZNF219Q9P2Y4 722 aaPredicted RBP10.51□□□□□ -0.73
ACTC1-202ENST00000557860 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
ACTC1-202ENST00000557860 PRDM2Q13029 1718 aa10.49□□□□□ -0.73
ACTC1-202ENST00000557860 CCDC88BA6NC98 1476 aa10.48□□□□□ -0.73
ACTC1-202ENST00000557860 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
ACTC1-202ENST00000557860 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
ACTC1-202ENST00000557860 CAPN15O75808 1086 aa10.42□□□□□ -0.74
ACTC1-202ENST00000557860 ZNF608Q9ULD9 1512 aaPredicted RBP10.4□□□□□ -0.74
ACTC1-202ENST00000557860 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
ACTC1-202ENST00000557860 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
ACTC1-202ENST00000557860 FKBP8Q14318 412 aa10.35□□□□□ -0.75
ACTC1-202ENST00000557860 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
ACTC1-202ENST00000557860 DNMBPQ6XZF7 1577 aa10.34□□□□□ -0.75
ACTC1-202ENST00000557860 POLA2Q14181 598 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms