RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-210	ENST00000557206	FAM212A	Q96EL1	285 aa		13.4	□□□□□ -0.26
HIF1A-210	ENST00000557206	DCAF8L2	P0C7V8	631 aa		13.35	□□□□□ -0.27
HIF1A-210	ENST00000557206	TRIM41	Q8WV44	630 aa		13.33	□□□□□ -0.28
HIF1A-210	ENST00000557206	RASEF	Q8IZ41	740 aa		13.32	□□□□□ -0.28
HIF1A-210	ENST00000557206	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.27	□□□□□ -0.29
HIF1A-210	ENST00000557206	GABBR2	O75899	941 aa		13.26	□□□□□ -0.29
HIF1A-210	ENST00000557206	PAK3	O75914	559 aa	Predicted RBP	13.26	□□□□□ -0.29
HIF1A-210	ENST00000557206	RGL2	O15211	777 aa		13.19	□□□□□ -0.3
HIF1A-210	ENST00000557206	CD44	P16070	742 aa	Known RBP	13.18	□□□□□ -0.3
HIF1A-210	ENST00000557206	PYGB	P11216	843 aa		13.17	□□□□□ -0.3
HIF1A-210	ENST00000557206	CHRM1	P11229	460 aa	Predicted RBP	13.14	□□□□□ -0.31
HIF1A-210	ENST00000557206	TAOK2	Q9UL54	1235 aa		13.12	□□□□□ -0.31
HIF1A-210	ENST00000557206	CLCN6	P51797	869 aa		13.1	□□□□□ -0.31
HIF1A-210	ENST00000557206	ZRANB1	Q9UGI0	708 aa		13.1	□□□□□ -0.31
HIF1A-210	ENST00000557206	CCDC61	Q9Y6R9	512 aa		13.09	□□□□□ -0.31
HIF1A-210	ENST00000557206	RIOK3	O14730	519 aa	Known RBP	13.08	□□□□□ -0.32
HIF1A-210	ENST00000557206	RNF25	Q96BH1	459 aa	Predicted RBP	13.05	□□□□□ -0.32
HIF1A-210	ENST00000557206	CHGA	P10645	457 aa	Known RBP	13.03	□□□□□ -0.32
HIF1A-210	ENST00000557206	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.02	□□□□□ -0.33
HIF1A-210	ENST00000557206	VGF	O15240	615 aa	Predicted RBP	13.01	□□□□□ -0.33
HIF1A-210	ENST00000557206	LHX8	Q68G74	356 aa		12.99	□□□□□ -0.33
HIF1A-210	ENST00000557206	PCDHB13	Q9Y5F0	798 aa		12.98	□□□□□ -0.33
HIF1A-210	ENST00000557206	ZNF579	Q8NAF0	562 aa	Known RBP	12.97	□□□□□ -0.33
HIF1A-210	ENST00000557206	KIF12	Q96FN5	646 aa		12.96	□□□□□ -0.33
HIF1A-210	ENST00000557206	MAP3K13	O43283	966 aa		12.95	□□□□□ -0.34
HIF1A-210	ENST00000557206	SGIP1	Q9BQI5	828 aa		12.95	□□□□□ -0.34
HIF1A-210	ENST00000557206	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.95	□□□□□ -0.34
HIF1A-210	ENST00000557206	POTEI	P0CG38	1075 aa		12.94	□□□□□ -0.34
HIF1A-210	ENST00000557206	BBX	Q8WY36	941 aa	Predicted RBP	12.94	□□□□□ -0.34
HIF1A-210	ENST00000557206	PHF12	Q96QT6	1004 aa		12.94	□□□□□ -0.34
HIF1A-210	ENST00000557206	PCDHB8	Q9UN66	801 aa		12.94	□□□□□ -0.34
HIF1A-210	ENST00000557206	STK25	O00506	426 aa		12.93	□□□□□ -0.34
HIF1A-210	ENST00000557206	HS6ST3	Q8IZP7	471 aa		12.92	□□□□□ -0.34
HIF1A-210	ENST00000557206	DCBLD2	Q96PD2	775 aa		12.91	□□□□□ -0.34
HIF1A-210	ENST00000557206	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.9	□□□□□ -0.34
HIF1A-210	ENST00000557206	ZFP91	Q96JP5	570 aa	Predicted RBP	12.9	□□□□□ -0.34
HIF1A-210	ENST00000557206	PDAP1	Q13442	181 aa	Known RBP	12.89	□□□□□ -0.35
HIF1A-210	ENST00000557206	IFNL1	Q8IU54	200 aa		12.89	□□□□□ -0.35
HIF1A-210	ENST00000557206	STK24	Q9Y6E0	443 aa		12.88	□□□□□ -0.35
HIF1A-210	ENST00000557206	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.86	□□□□□ -0.35
HIF1A-210	ENST00000557206	PSEN1	P49768	467 aa		12.85	□□□□□ -0.35
HIF1A-210	ENST00000557206	SLC24A1	O60721	1099 aa		12.84	□□□□□ -0.35
HIF1A-210	ENST00000557206	PLCB2	Q00722	1185 aa		12.83	□□□□□ -0.36
HIF1A-210	ENST00000557206	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.81	□□□□□ -0.36
HIF1A-210	ENST00000557206	CFAP44	Q96MT7	982 aa		12.81	□□□□□ -0.36
HIF1A-210	ENST00000557206	MS4A3	Q96HJ5	214 aa		12.8	□□□□□ -0.36
HIF1A-210	ENST00000557206	GALR2	O43603	387 aa	Predicted RBP	12.79	□□□□□ -0.36
HIF1A-210	ENST00000557206	SPRYD3	Q8NCJ5	442 aa		12.79	□□□□□ -0.36
HIF1A-210	ENST00000557206	DNAJC5	Q9H3Z4	198 aa		12.77	□□□□□ -0.37
HIF1A-210	ENST00000557206	TMEM106C	Q9BVX2	250 aa		12.72	□□□□□ -0.37
HIF1A-210	ENST00000557206	HAP1	P54257	671 aa	Predicted RBP	12.71	□□□□□ -0.37
HIF1A-210	ENST00000557206	GOLGA2	Q08379	1002 aa		12.71	□□□□□ -0.37
HIF1A-210	ENST00000557206	CABP2	Q9NPB3	220 aa		12.7	□□□□□ -0.38
HIF1A-210	ENST00000557206	RYDEN	Q9NUL5	291 aa	Known RBP	12.7	□□□□□ -0.38
HIF1A-210	ENST00000557206	NKX1-1	Q15270	411 aa	Predicted RBP	12.68	□□□□□ -0.38
HIF1A-210	ENST00000557206	TRPC6	Q9Y210	931 aa		12.68	□□□□□ -0.38
HIF1A-210	ENST00000557206	TIE1	P35590	1138 aa		12.67	□□□□□ -0.38
HIF1A-210	ENST00000557206	EFCAB3	Q8N7B9	438 aa		12.63	□□□□□ -0.39
HIF1A-210	ENST00000557206	TTLL13P	A6NNM8	815 aa		12.61	□□□□□ -0.39
HIF1A-210	ENST00000557206	GTPBP6	O43824	516 aa	Predicted RBP	12.61	□□□□□ -0.39
HIF1A-210	ENST00000557206	MKRN3	Q13064	507 aa	Known RBP	12.61	□□□□□ -0.39
HIF1A-210	ENST00000557206	SOX12	O15370	315 aa		12.6	□□□□□ -0.39
HIF1A-210	ENST00000557206	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.6	□□□□□ -0.39
HIF1A-210	ENST00000557206	NLRP6	P59044	892 aa		12.57	□□□□□ -0.4
HIF1A-210	ENST00000557206	TRIM35	Q9UPQ4	493 aa		12.56	□□□□□ -0.4
HIF1A-210	ENST00000557206	MFRP	Q9BY79	579 aa		12.55	□□□□□ -0.4
HIF1A-210	ENST00000557206	ASTL	Q6HA08	431 aa	Predicted RBP	12.54	□□□□□ -0.4
HIF1A-210	ENST00000557206	PELP1	Q8IZL8	1130 aa	Known RBP	12.53	□□□□□ -0.4
HIF1A-210	ENST00000557206	PHF8	Q9UPP1	1060 aa		12.53	□□□□□ -0.4
HIF1A-210	ENST00000557206	ATMIN	O43313	823 aa	Predicted RBP	12.51	□□□□□ -0.41
HIF1A-210	ENST00000557206	ATN1	P54259	1190 aa	Predicted RBP	12.51	□□□□□ -0.41
HIF1A-210	ENST00000557206	TSHZ2	Q9NRE2	1034 aa		12.51	□□□□□ -0.41
HIF1A-210	ENST00000557206	POTEB2	H3BUK9	544 aa		12.5	□□□□□ -0.41
HIF1A-210	ENST00000557206	OTUD5	Q96G74	571 aa		12.5	□□□□□ -0.41
HIF1A-210	ENST00000557206	VSIG10	Q8N0Z9	540 aa		12.49	□□□□□ -0.41
HIF1A-210	ENST00000557206	SLC39A7	Q92504	469 aa		12.49	□□□□□ -0.41
HIF1A-210	ENST00000557206	C7	P10643	843 aa		12.48	□□□□□ -0.41
HIF1A-210	ENST00000557206	METRN	Q9UJH8	293 aa		12.48	□□□□□ -0.41
HIF1A-210	ENST00000557206	FBXO22	Q8NEZ5	403 aa		12.47	□□□□□ -0.41
HIF1A-210	ENST00000557206	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.47	□□□□□ -0.41	7e-7	■■□□□ 11.8
HIF1A-210	ENST00000557206	IER5L	Q5T953	404 aa		12.41	□□□□□ -0.42
HIF1A-210	ENST00000557206	PPP1R37	O75864	691 aa		12.39	□□□□□ -0.43
HIF1A-210	ENST00000557206	MS4A4A	Q96JQ5	239 aa		12.39	□□□□□ -0.43
HIF1A-210	ENST00000557206	SEC24B	O95487	1268 aa		12.38	□□□□□ -0.43
HIF1A-210	ENST00000557206	MAMSTR	Q6ZN01	415 aa		12.37	□□□□□ -0.43
HIF1A-210	ENST00000557206	OCEL1	Q9H607	264 aa		12.37	□□□□□ -0.43
HIF1A-210	ENST00000557206	PLCG2	P16885	1265 aa		12.36	□□□□□ -0.43
HIF1A-210	ENST00000557206	IRX5	P78411	483 aa	Predicted RBP	12.34	□□□□□ -0.43
HIF1A-210	ENST00000557206	ILDR1	Q86SU0	546 aa	Predicted RBP	12.34	□□□□□ -0.43
HIF1A-210	ENST00000557206	KDM2A	Q9Y2K7	1162 aa		12.34	□□□□□ -0.43
HIF1A-210	ENST00000557206		G3V3G9	751 aa		12.33	□□□□□ -0.44
HIF1A-210	ENST00000557206	POTEJ	P0CG39	1038 aa		12.3	□□□□□ -0.44
HIF1A-210	ENST00000557206	DPY19L2	Q6NUT2	758 aa		12.3	□□□□□ -0.44
HIF1A-210	ENST00000557206	PDCD7	Q8N8D1	485 aa	Known RBP	12.29	□□□□□ -0.44
HIF1A-210	ENST00000557206	WDR70	Q9NW82	654 aa		12.28	□□□□□ -0.44
HIF1A-210	ENST00000557206	SCUBE2	Q9NQ36	999 aa		12.27	□□□□□ -0.45
HIF1A-210	ENST00000557206	CADPS2	Q86UW7	1296 aa		12.26	□□□□□ -0.45
HIF1A-210	ENST00000557206	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.26	□□□□□ -0.45
HIF1A-210	ENST00000557206	PLSCR2	Q9NRY7	297 aa		12.24	□□□□□ -0.45
HIF1A-210	ENST00000557206	COLQ	Q9Y215	455 aa	Predicted RBP	12.24	□□□□□ -0.45

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