RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 CHGAP10645 457 aaKnown RBP9.18□□□□□ -0.94
GPHN-214ENST00000556633 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
GPHN-214ENST00000556633 PRKAR2AP13861 404 aaKnown RBP9.16□□□□□ -0.94
GPHN-214ENST00000556633 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
GPHN-214ENST00000556633 RIOK3O14730 519 aaKnown RBP9.14□□□□□ -0.95
GPHN-214ENST00000556633 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.95
GPHN-214ENST00000556633 CHRDL2Q6WN34 429 aa9.13□□□□□ -0.95
GPHN-214ENST00000556633 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
GPHN-214ENST00000556633 PYGBP11216 843 aa9.12□□□□□ -0.95
GPHN-214ENST00000556633 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
GPHN-214ENST00000556633 HS6ST3Q8IZP7 471 aa9.12□□□□□ -0.95
GPHN-214ENST00000556633 TAOK2Q9UL54 1235 aa9.12□□□□□ -0.95
GPHN-214ENST00000556633 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
GPHN-214ENST00000556633 TSPYL2Q9H2G4 693 aaPredicted RBP9.11□□□□□ -0.95
GPHN-214ENST00000556633 VGFO15240 615 aaPredicted RBP9.08□□□□□ -0.96
GPHN-214ENST00000556633 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
GPHN-214ENST00000556633 SPRYD3Q8NCJ5 442 aa9.07□□□□□ -0.96
GPHN-214ENST00000556633 STK25O00506 426 aa9.05□□□□□ -0.96
GPHN-214ENST00000556633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.02□□□□□ -0.97
GPHN-214ENST00000556633 ZFP91Q96JP5 570 aaPredicted RBP9.02□□□□□ -0.97
GPHN-214ENST00000556633 DNAJC5Q9H3Z4 198 aa9.02□□□□□ -0.97
GPHN-214ENST00000556633 PAK3O75914 559 aaPredicted RBP9.01□□□□□ -0.97
GPHN-214ENST00000556633 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
GPHN-214ENST00000556633 SGIP1Q9BQI5 828 aa9.01□□□□□ -0.97
GPHN-214ENST00000556633 CCDC61Q9Y6R9 512 aa9□□□□□ -0.97
GPHN-214ENST00000556633 NKX1-1Q15270 411 aaPredicted RBP8.99□□□□□ -0.97
GPHN-214ENST00000556633 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
GPHN-214ENST00000556633 BCL11BQ9C0K0 894 aaPredicted RBP8.99□□□□□ -0.97
GPHN-214ENST00000556633 STK24Q9Y6E0 443 aa8.99□□□□□ -0.97
GPHN-214ENST00000556633 TSHZ2Q9NRE2 1034 aa8.97□□□□□ -0.97
GPHN-214ENST00000556633 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
GPHN-214ENST00000556633 PCDHB13Q9Y5F0 798 aa8.96□□□□□ -0.98
GPHN-214ENST00000556633 PDAP1Q13442 181 aaKnown RBP8.94□□□□□ -0.98
GPHN-214ENST00000556633 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
GPHN-214ENST00000556633 ZNF579Q8NAF0 562 aaKnown RBP8.93□□□□□ -0.98
GPHN-214ENST00000556633 GTPBP6O43824 516 aaPredicted RBP8.92□□□□□ -0.98
GPHN-214ENST00000556633 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
GPHN-214ENST00000556633 ZRANB1Q9UGI0 708 aa8.91□□□□□ -0.98
GPHN-214ENST00000556633 MAP3K13O43283 966 aa8.9□□□□□ -0.98
GPHN-214ENST00000556633 PSEN1P49768 467 aa8.9□□□□□ -0.98
GPHN-214ENST00000556633 KIF12Q96FN5 646 aa8.9□□□□□ -0.98
GPHN-214ENST00000556633 IFNL1Q8IU54 200 aa8.89□□□□□ -0.99
GPHN-214ENST00000556633 RYDENQ9NUL5 291 aaKnown RBP8.88□□□□□ -0.99
GPHN-214ENST00000556633 PHF12Q96QT6 1004 aa8.86□□□□□ -0.99
GPHN-214ENST00000556633 BCANQ96GW7 911 aa8.83□□□□□ -1
GPHN-214ENST00000556633 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
GPHN-214ENST00000556633 CABP2Q9NPB3 220 aa8.79□□□□□ -1
GPHN-214ENST00000556633 MFRPQ9BY79 579 aa8.78□□□□□ -1
GPHN-214ENST00000556633 EFCAB3Q8N7B9 438 aa8.77□□□□□ -1.01
GPHN-214ENST00000556633 MS4A3Q96HJ5 214 aa8.76□□□□□ -1.01
GPHN-214ENST00000556633 NLRP6P59044 892 aa8.73□□□□□ -1.01
GPHN-214ENST00000556633 TMEM106CQ9BVX2 250 aa8.73□□□□□ -1.01
GPHN-214ENST00000556633 SOX12O15370 315 aa8.72□□□□□ -1.01
GPHN-214ENST00000556633 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
GPHN-214ENST00000556633 TRPC6Q9Y210 931 aa8.72□□□□□ -1.01
GPHN-214ENST00000556633 HAX1O00165 279 aa8.71□□□□□ -1.02
GPHN-214ENST00000556633 GOLGA2Q08379 1002 aa8.71□□□□□ -1.02
GPHN-214ENST00000556633 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
GPHN-214ENST00000556633 PPP1R37O75864 691 aa8.68□□□□□ -1.02
GPHN-214ENST00000556633 CADPS2Q86UW7 1296 aa8.68□□□□□ -1.02
GPHN-214ENST00000556633 TIE1P35590 1138 aa8.66□□□□□ -1.02
GPHN-214ENST00000556633 NBR1Q14596 966 aa8.66□□□□□ -1.02
GPHN-214ENST00000556633 TTLL13PA6NNM8 815 aa8.65□□□□□ -1.02
GPHN-214ENST00000556633 GALR2O43603 387 aaPredicted RBP8.65□□□□□ -1.02
GPHN-214ENST00000556633 EVX2Q03828 476 aa8.65□□□□□ -1.02
GPHN-214ENST00000556633 MKRN3Q13064 507 aaKnown RBP8.65□□□□□ -1.02
GPHN-214ENST00000556633 MS4A4AQ96JQ5 239 aa8.63□□□□□ -1.03
GPHN-214ENST00000556633 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
GPHN-214ENST00000556633 WDR70Q9NW82 654 aa8.63□□□□□ -1.03
GPHN-214ENST00000556633 CLCN6P51797 869 aa8.61□□□□□ -1.03
GPHN-214ENST00000556633 P3H3Q8IVL6 736 aa8.59□□□□□ -1.03
GPHN-214ENST00000556633 TRIM35Q9UPQ4 493 aa8.59□□□□□ -1.03
GPHN-214ENST00000556633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.58□□□□□ -1.042e-6■■■■□ 20.1
GPHN-214ENST00000556633 PRKCSHP14314 528 aaPredicted RBP8.57□□□□□ -1.04
GPHN-214ENST00000556633 ILDR1Q86SU0 546 aaPredicted RBP8.55□□□□□ -1.04
GPHN-214ENST00000556633 KCNV2Q8TDN2 545 aa8.55□□□□□ -1.04
GPHN-214ENST00000556633 ATN1P54259 1190 aaPredicted RBP8.54□□□□□ -1.04
GPHN-214ENST00000556633 TPRNQ4KMQ1 711 aa8.54□□□□□ -1.04
GPHN-214ENST00000556633 NCKAP5LQ9HCH0 1330 aa8.53□□□□□ -1.04
GPHN-214ENST00000556633 ATMINO43313 823 aaPredicted RBP8.52□□□□□ -1.05
GPHN-214ENST00000556633 PDE4AP27815 886 aa8.51□□□□□ -1.05
GPHN-214ENST00000556633 ASTLQ6HA08 431 aaPredicted RBP8.51□□□□□ -1.05
GPHN-214ENST00000556633 LARP6Q9BRS8 491 aaKnown RBP8.51□□□□□ -1.05
GPHN-214ENST00000556633 GABBR2O75899 941 aa8.5□□□□□ -1.05
GPHN-214ENST00000556633 POTEHQ6S545 545 aa8.5□□□□□ -1.05
GPHN-214ENST00000556633 CRISPLD2Q9H0B8 497 aa8.5□□□□□ -1.05
GPHN-214ENST00000556633 E2F4Q16254 413 aa8.49□□□□□ -1.05
GPHN-214ENST00000556633 DPY19L2Q6NUT2 758 aa8.49□□□□□ -1.05
GPHN-214ENST00000556633 IER5LQ5T953 404 aa8.48□□□□□ -1.05
GPHN-214ENST00000556633 PDCD7Q8N8D1 485 aaKnown RBP8.48□□□□□ -1.05
GPHN-214ENST00000556633 MFSD10Q14728 455 aa8.47□□□□□ -1.05
GPHN-214ENST00000556633 DDX27Q96GQ7 796 aaKnown RBP8.47□□□□□ -1.05
GPHN-214ENST00000556633 IRX5P78411 483 aaPredicted RBP8.46□□□□□ -1.06
GPHN-214ENST00000556633 OCEL1Q9H607 264 aa8.46□□□□□ -1.06
GPHN-214ENST00000556633 MICALL2Q8IY33 904 aa8.45□□□□□ -1.06
GPHN-214ENST00000556633 ARHGEF1Q92888 912 aaKnown RBP8.45□□□□□ -1.06
GPHN-214ENST00000556633 DCBLD2Q96PD2 775 aa8.45□□□□□ -1.06
GPHN-214ENST00000556633 PLCG2P16885 1265 aa8.43□□□□□ -1.06
GPHN-214ENST00000556633 G3V3G9 751 aa8.41□□□□□ -1.06
GPHN-214ENST00000556633 PELP1Q8IZL8 1130 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms